Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12525

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,681,852	+		DZA65_RS12520	0.25	+0.5
2,681,853	-		DZA65_RS12520	0.25	-0.3
2,681,853	-		DZA65_RS12520	0.25	+0.5
2,681,885	+		DZA65_RS12520	0.28	-0.7
2,681,885	+		DZA65_RS12520	0.28	+3.2
2,681,885	+		DZA65_RS12520	0.28	+0.3
2,681,886	-		DZA65_RS12520	0.28	-0.0
2,681,886	-		DZA65_RS12520	0.28	-0.0
2,681,886	-		DZA65_RS12520	0.28	-0.2
2,681,898	+		DZA65_RS12520	0.29	+1.4
2,681,899	-		DZA65_RS12520	0.29	+0.9
2,681,899	-		DZA65_RS12520	0.29	-0.5
2,681,924	+		DZA65_RS12520	0.31	+1.4
2,681,925	-		DZA65_RS12520	0.31	-3.1
2,681,925	-		DZA65_RS12520	0.31	-0.7
2,681,938	+				+0.4
2,681,938	+		DZA65_RS12520	0.32	-0.1
2,681,939	-		DZA65_RS12520	0.32	-1.4
2,681,939	-		DZA65_RS12520	0.32	-0.2
2,681,939	-		DZA65_RS12520	0.32	-0.2
2,682,028	+		DZA65_RS12520	0.39	+0.9
2,682,028	+		DZA65_RS12520	0.39	+1.8
2,682,028	+		DZA65_RS12520	0.39	+1.4
2,682,028	+		DZA65_RS12520	0.39	-0.8
2,682,028	+		DZA65_RS12520	0.39	-2.0
2,682,029	-		DZA65_RS12520	0.39	-0.4
2,682,029	-		DZA65_RS12520	0.39	-0.2
2,682,029	-		DZA65_RS12520	0.39	+0.5
2,682,029	-		DZA65_RS12520	0.39	+1.7
2,682,029	-		DZA65_RS12520	0.39	+0.7
2,682,057	+		DZA65_RS12520	0.42	+0.4
2,682,058	-		DZA65_RS12520	0.42	-0.7
2,682,306	+		DZA65_RS12520	0.62	-0.2
2,682,307	-		DZA65_RS12520	0.62	+0.4
2,682,307	-		DZA65_RS12520	0.62	+0.9
2,682,307	-		DZA65_RS12520	0.62	+0.7
2,682,388	+		DZA65_RS12520	0.68	-0.9
2,682,432	+		DZA65_RS12520	0.72	+0.1
2,682,432	+		DZA65_RS12520	0.72	+0.1
2,682,432	+		DZA65_RS12520	0.72	+0.7
2,682,432	+		DZA65_RS12520	0.72	+0.5
2,682,432	+		DZA65_RS12520	0.72	-0.2
2,682,432	+		DZA65_RS12520	0.72	-1.7
2,682,432	+		DZA65_RS12520	0.72	+0.3
2,682,433	-		DZA65_RS12520	0.72	+0.8
2,682,433	-		DZA65_RS12520	0.72	-1.7
2,682,433	-		DZA65_RS12520	0.72	+0.5
2,682,433	-		DZA65_RS12520	0.72	-1.9
2,682,433	-		DZA65_RS12520	0.72	-0.9
2,682,433	-		DZA65_RS12520	0.72	-1.5
2,682,433	-		DZA65_RS12520	0.72	+0.7
2,682,509	+		DZA65_RS12520	0.78	+0.1
2,682,509	+		DZA65_RS12520	0.78	-0.1
2,682,509	+		DZA65_RS12520	0.78	+0.3
2,682,509	+		DZA65_RS12520	0.78	-0.3
2,682,509	+		DZA65_RS12520	0.78	-1.7
2,682,510	-		DZA65_RS12520	0.78	-0.6
2,682,510	-		DZA65_RS12520	0.78	+0.1
2,682,510	-		DZA65_RS12520	0.78	+0.2
2,682,510	-		DZA65_RS12520	0.78	-0.2
2,682,510	-		DZA65_RS12520	0.78	+0.0
2,682,510	-		DZA65_RS12520	0.78	-0.9
2,682,510	-		DZA65_RS12520	0.78	-0.5
2,682,592	-		DZA65_RS12520	0.85	-1.3
2,682,645	+		DZA65_RS12520	0.89	+0.3
2,682,646	-		DZA65_RS12520	0.89	+1.2
2,682,646	-		DZA65_RS12520	0.89	+0.2
2,682,646	-		DZA65_RS12520	0.89	+1.0
2,682,646	-		DZA65_RS12520	0.89	-0.6
2,682,646	-		DZA65_RS12520	0.89	-0.3
2,682,646	-		DZA65_RS12520	0.89	-0.7
2,682,646	-		DZA65_RS12520	0.89	+0.6
2,682,682	-				+0.2
2,682,703	+				+0.9
2,682,703	+				+0.7
2,682,704	-				-0.6
2,682,731	+				-0.5
2,682,731	+				-0.4
2,682,732	-				-0.1
2,682,732	-				-0.4
2,682,732	-				+0.2
2,682,732	-				-0.7
2,682,787	+				-1.7
2,682,800	-				+0.7
2,682,800	-				-0.3
2,682,808	+				+1.4
2,682,808	+				+1.0
2,682,808	+				+1.3
2,682,809	-				-1.3
2,682,809	-				-0.9
2,682,809	-				-1.8
2,682,809	-				-0.5
2,682,809	-				-0.5
2,682,809	-				-0.1
2,682,809	-				-0.2
2,682,932	+				-0.1
2,682,932	+				+0.3
2,682,933	-				+0.1
2,683,035	+				+1.7
2,683,035	+				-0.1
2,683,036	-				-1.4
2,683,036	-				-1.2
2,683,054	+				-0.3
2,683,054	+				+0.5
2,683,055	-				-0.9
2,683,071	+				+1.5
2,683,072	-				-0.5
2,683,072	-				+0.7
2,683,208	+		DZA65_RS12525	0.15	+0.4
2,683,208	+		DZA65_RS12525	0.15	-0.4
2,683,208	+		DZA65_RS12525	0.15	-0.0
2,683,208	+		DZA65_RS12525	0.15	+0.9
2,683,208	+		DZA65_RS12525	0.15	+0.3
2,683,208	+		DZA65_RS12525	0.15	+1.1
2,683,209	-		DZA65_RS12525	0.15	-0.4
2,683,209	-		DZA65_RS12525	0.15	-0.1
2,683,209	-		DZA65_RS12525	0.15	+0.1
2,683,209	-		DZA65_RS12525	0.15	+1.9
2,683,209	-		DZA65_RS12525	0.15	-2.7
2,683,209	-		DZA65_RS12525	0.15	-1.5
2,683,209	-		DZA65_RS12525	0.15	+0.0
2,683,209	-		DZA65_RS12525	0.15	-0.9
2,683,209	-		DZA65_RS12525	0.15	+1.4
2,683,252	+		DZA65_RS12525	0.16	-1.4
2,683,278	-		DZA65_RS12525	0.17	+0.5
2,683,305	+		DZA65_RS12525	0.19	-0.2
2,683,306	-		DZA65_RS12525	0.19	+1.1
2,683,306	-		DZA65_RS12525	0.19	+0.1
2,683,306	-		DZA65_RS12525	0.19	-1.3
2,683,355	+		DZA65_RS12525	0.20	-0.2
2,683,356	-		DZA65_RS12525	0.20	-0.7
2,683,385	+		DZA65_RS12525	0.22	-0.7
2,683,386	-		DZA65_RS12525	0.22	-1.8
2,683,391	+		DZA65_RS12525	0.22	+0.1
2,683,391	+		DZA65_RS12525	0.22	-0.3
2,683,619	+		DZA65_RS12525	0.30	+1.4
2,683,619	+		DZA65_RS12525	0.30	-0.4
2,683,620	-		DZA65_RS12525	0.30	+2.2
2,683,620	-		DZA65_RS12525	0.30	+2.4
2,683,620	-		DZA65_RS12525	0.30	-0.2
2,683,620	-		DZA65_RS12525	0.30	-0.2
2,683,709	-		DZA65_RS12525	0.34	+0.4
2,683,709	-		DZA65_RS12525	0.34	-2.6
2,683,709	-				+2.1
2,683,722	-		DZA65_RS12525	0.34	-1.7
2,684,024	+		DZA65_RS12525	0.46	-1.0
2,684,025	-		DZA65_RS12525	0.46	-0.2
2,684,025	-		DZA65_RS12525	0.46	-0.2
2,684,156	-		DZA65_RS12525	0.51	-0.4
2,684,360	-				-0.5
2,684,420	+		DZA65_RS12525	0.61	-1.2
2,684,420	+		DZA65_RS12525	0.61	+0.1
2,684,421	-		DZA65_RS12525	0.61	-0.9
2,684,470	+		DZA65_RS12525	0.63	+0.3
2,684,470	+		DZA65_RS12525	0.63	+2.3
2,684,471	-		DZA65_RS12525	0.63	-1.4
2,684,471	-		DZA65_RS12525	0.63	-0.6
2,684,489	+		DZA65_RS12525	0.64	+0.7
2,684,489	+		DZA65_RS12525	0.64	-1.2
2,684,489	+		DZA65_RS12525	0.64	-0.9
2,684,489	+		DZA65_RS12525	0.64	-2.1
2,684,489	+		DZA65_RS12525	0.64	-0.2
2,684,489	+		DZA65_RS12525	0.64	-0.5
2,684,489	+		DZA65_RS12525	0.64	+1.1
2,684,489	+		DZA65_RS12525	0.64	-0.7
2,684,490	-		DZA65_RS12525	0.64	+0.3
2,684,490	-		DZA65_RS12525	0.64	-1.5
2,684,490	-		DZA65_RS12525	0.64	-0.9
2,684,490	-		DZA65_RS12525	0.64	-3.1
2,684,490	-		DZA65_RS12525	0.64	+0.1
2,684,490	-		DZA65_RS12525	0.64	-0.9
2,684,490	-		DZA65_RS12525	0.64	+2.1
2,684,490	-		DZA65_RS12525	0.64	+0.1
2,684,490	-		DZA65_RS12525	0.64	-0.8
2,684,504	+		DZA65_RS12525	0.64	-2.5
2,684,504	+		DZA65_RS12525	0.64	+0.4
2,684,505	-		DZA65_RS12525	0.64	+0.5
2,684,567	-		DZA65_RS12525	0.66	+0.2
2,684,567	-		DZA65_RS12525	0.66	-1.3
2,684,681	+		DZA65_RS12525	0.71	+2.1
2,684,681	+		DZA65_RS12525	0.71	+0.1
2,684,681	+		DZA65_RS12525	0.71	-0.7
2,684,682	-		DZA65_RS12525	0.71	+0.8
2,684,682	-		DZA65_RS12525	0.71	-2.3
2,684,682	-		DZA65_RS12525	0.71	-0.3
2,684,682	-		DZA65_RS12525	0.71	-0.1
2,684,682	-		DZA65_RS12525	0.71	-0.7
2,684,731	+		DZA65_RS12525	0.73	+0.2
2,684,731	+		DZA65_RS12525	0.73	-0.3
2,684,731	+		DZA65_RS12525	0.73	-0.7
2,684,732	-		DZA65_RS12525	0.73	+0.7
2,684,732	-		DZA65_RS12525	0.73	+0.7
2,684,732	-		DZA65_RS12525	0.73	-0.2
2,684,735	+		DZA65_RS12525	0.73	-0.0
2,684,735	+		DZA65_RS12525	0.73	+0.6
2,684,774	+		DZA65_RS12525	0.74	+0.5
2,684,864	+		DZA65_RS12525	0.78	-0.2
2,684,864	+		DZA65_RS12525	0.78	-0.4
2,684,864	+		DZA65_RS12525	0.78	+0.2
2,684,865	-		DZA65_RS12525	0.78	-1.4
2,684,865	-		DZA65_RS12525	0.78	-0.3
2,684,963	+		DZA65_RS12525	0.82	+0.5
2,684,963	+		DZA65_RS12525	0.82	+0.7
2,684,963	+		DZA65_RS12525	0.82	+0.6
2,684,963	+		DZA65_RS12525	0.82	+0.2
2,684,963	+		DZA65_RS12525	0.82	-0.9
2,684,964	-		DZA65_RS12525	0.82	+0.6
2,684,964	-				+0.7
2,684,964	-		DZA65_RS12525	0.82	-1.2
2,684,964	-		DZA65_RS12525	0.82	+0.2
2,684,964	-		DZA65_RS12525	0.82	+0.4
2,684,964	-		DZA65_RS12525	0.82	+1.5
2,684,964	-		DZA65_RS12525	0.82	-1.7
2,684,964	-		DZA65_RS12525	0.82	-0.3
2,684,964	-		DZA65_RS12525	0.82	-2.7
2,684,964	-		DZA65_RS12525	0.82	-0.1
2,684,964	-		DZA65_RS12525	0.82	-0.9
2,684,964	-		DZA65_RS12525	0.82	-1.3
2,684,964	-				+0.8
2,684,965	+		DZA65_RS12525	0.82	-0.3
2,684,966	-		DZA65_RS12525	0.82	-0.2
2,684,966	-		DZA65_RS12525	0.82	+1.1
2,684,966	-		DZA65_RS12525	0.82	-0.9
2,684,966	-		DZA65_RS12525	0.82	-0.8
2,684,966	-		DZA65_RS12525	0.82	-0.9
2,684,966	-		DZA65_RS12525	0.82	-0.1
2,685,070	+		DZA65_RS12525	0.86	+0.1
2,685,096	+		DZA65_RS12525	0.87	-3.1
2,685,097	-		DZA65_RS12525	0.87	-0.8
2,685,097	-		DZA65_RS12525	0.87	-0.7
2,685,097	-		DZA65_RS12525	0.87	+0.1
2,685,253	+				+1.5
2,685,254	-				+0.2
2,685,310	+				+0.6
2,685,477	-				+1.2
2,685,511	+				+0.1
2,685,511	+				+1.2
2,685,512	-				+0.2
2,685,512	-				-1.3
2,685,516	+				-0.7
2,685,516	+				+0.3
2,685,516	+				-0.3
2,685,517	-				-0.1
2,685,536	+				+1.4
2,685,542	+				-0.9
2,685,542	+				+0.3
2,685,569	+				+0.6
2,685,569	+				+0.6
2,685,570	-				-1.3
2,685,614	+				+0.5
2,685,727	+		DZA65_RS12530	0.12	+1.5
2,685,739	-		DZA65_RS12530	0.12	+0.1
2,685,852	+		DZA65_RS12530	0.20	-0.1
2,685,852	+		DZA65_RS12530	0.20	-2.5
2,685,853	-		DZA65_RS12530	0.20	-1.2
2,685,853	-		DZA65_RS12530	0.20	-0.7
2,685,853	-		DZA65_RS12530	0.20	+1.4
2,685,853	-		DZA65_RS12530	0.20	-1.8
2,685,853	-		DZA65_RS12530	0.20	-0.1
2,686,008	+		DZA65_RS12530	0.31	-1.7
2,686,009	-		DZA65_RS12530	0.31	+1.3
2,686,064	+		DZA65_RS12530	0.35	+0.9
2,686,065	-		DZA65_RS12530	0.35	+0.1
2,686,065	-		DZA65_RS12530	0.35	+0.1
2,686,065	-		DZA65_RS12530	0.35	+0.1
2,686,065	-		DZA65_RS12530	0.35	-1.5
2,686,065	-		DZA65_RS12530	0.35	-0.6
2,686,291	-		DZA65_RS12530	0.51	+0.1
2,686,291	-		DZA65_RS12530	0.51	+0.1
2,686,291	-		DZA65_RS12530	0.51	-0.4