Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09670

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,033,523	+		DZA65_RS09660	0.76	-0.2
2,033,523	+		DZA65_RS09660	0.76	+0.1
2,033,524	-		DZA65_RS09660	0.76	-0.2
2,033,524	-		DZA65_RS09660	0.76	-2.7
2,033,524	-		DZA65_RS09660	0.76	-1.7
2,033,524	-		DZA65_RS09660	0.76	-1.1
2,033,524	-		DZA65_RS09660	0.76	-0.9
2,033,534	+		DZA65_RS09660	0.77	+1.6
2,033,534	+		DZA65_RS09660	0.77	-0.1
2,033,535	-		DZA65_RS09660	0.77	-1.6
2,033,712	+				+0.6
2,033,712	+				-0.6
2,033,712	+				+0.4
2,033,712	+				-0.7
2,033,712	+				-0.7
2,033,712	+				+0.0
2,033,712	+				-1.1
2,033,712	+				-1.9
2,033,712	+				-1.9
2,033,712	+				-0.2
2,033,712	+				+1.5
2,033,712	+				-0.3
2,033,712	+				+0.6
2,033,713	-				-0.0
2,033,713	-				+0.8
2,033,713	-				-0.1
2,033,713	-				-0.5
2,033,713	-				+0.8
2,033,713	-				-0.6
2,033,713	-				+1.0
2,033,713	-				-0.8
2,033,906	-				+0.1
2,033,917	+				-1.0
2,033,917	+				-0.5
2,033,917	+				+0.9
2,033,917	+				-1.3
2,033,918	-				+1.5
2,033,918	-				-0.0
2,033,918	-				+0.9
2,033,918	-				+1.0
2,033,919	+				+2.2
2,033,919	+				+0.1
2,033,919	+				+0.1
2,033,919	+				+0.3
2,033,919	+				-0.3
2,033,919	+				-0.1
2,033,919	+				-0.3
2,033,919	+				+1.7
2,033,919	+				-0.2
2,033,919	+				-2.9
2,033,919	+				+0.1
2,033,919	+				+1.1
2,033,919	+				+1.9
2,033,919	+				-0.5
2,033,919	+				+0.5
2,033,919	+				+1.1
2,033,919	+				+0.1
2,033,919	+				-1.1
2,033,919	+				-0.9
2,033,919	+				-0.2
2,033,919	+				+0.2
2,033,919	+				+1.0
2,033,920	-				-0.2
2,033,920	-				-0.1
2,033,920	-				-0.1
2,033,920	-				+0.0
2,033,920	-				+0.7
2,033,920	-				-0.5
2,033,920	-				+1.1
2,033,920	-				+0.3
2,033,920	-				-1.8
2,033,920	-				+1.0
2,033,920	-				+0.6
2,033,920	-				-0.3
2,033,920	-				+0.2
2,033,920	-				+0.6
2,033,920	-				+0.5
2,033,920	-				+2.0
2,033,920	-				-0.4
2,033,920	-				+3.6
2,033,920	-				-1.5
2,033,920	-				-0.3
2,033,920	-				+0.1
2,033,920	-				+1.4
2,033,924	-				+1.0
2,033,924	-				-0.6
2,033,924	-				+0.9
2,033,924	-				+1.2
2,033,924	-				+0.7
2,033,924	-				+0.4
2,034,006	+				-2.0
2,034,046	+				+0.8
2,034,048	+				-2.4
2,034,050	+				-0.2
2,034,050	+				-0.9
2,034,050	+				+2.9
2,034,050	+				-1.5
2,034,050	+				-1.1
2,034,050	+				-1.5
2,034,063	+				+0.1
2,034,064	-				-0.1
2,034,096	+				-0.6
2,034,096	+				-0.2
2,034,096	+				-0.8
2,034,096	+				-0.3
2,034,096	+				+0.1
2,034,097	-				-0.3
2,034,097	-				+0.3
2,034,097	-				-0.5
2,034,101	+				-0.7
2,034,102	-				-0.6
2,034,102	-				+0.2
2,034,102	-				+0.2
2,034,142	+				+0.6
2,034,149	-				-0.6
2,034,183	+				-1.3
2,034,183	+				+1.7
2,034,184	-				+0.2
2,034,210	+				-0.1
2,034,211	-				+0.8
2,034,211	-				-0.4
2,034,211	-				+2.1
2,034,221	+				-0.1
2,034,221	+				+0.5
2,034,221	+				+0.2
2,034,221	+				+0.5
2,034,222	-				+0.7
2,034,222	-				-1.6
2,034,222	-				-0.9
2,034,222	-				-1.2
2,034,222	-				+1.6
2,034,320	+				-1.5
2,034,321	-				-0.1
2,034,321	-				-0.0
2,034,321	-				+0.7
2,034,366	+				-1.3
2,034,366	+				-0.2
2,034,366	+				-0.4
2,034,367	-				+0.8
2,034,367	-				-1.5
2,034,367	-				+0.7
2,034,375	+				+2.7
2,034,379	+				-1.5
2,034,379	+				-3.2
2,034,379	+				-1.1
2,034,380	-				-0.9
2,034,380	-				+0.8
2,034,380	-				+0.1
2,034,380	-				-0.4
2,034,452	+				+1.8
2,034,452	+				+0.3
2,034,452	+				+0.2
2,034,453	-				+0.4
2,034,453	-				+0.7
2,034,453	-				-0.2
2,034,484	+				+0.3
2,034,485	-				+0.1
2,034,485	-				-0.1
2,034,507	+				+0.6
2,034,507	+				+1.2
2,034,508	-				+0.6
2,034,513	+				+0.2
2,034,513	+				-0.2
2,034,513	+				-0.3
2,034,514	-				-2.2
2,034,514	-				+0.6
2,034,526	+				+0.1
2,034,527	-				+0.7
2,034,553	+				+0.8
2,034,553	+				-0.5
2,034,554	-				+1.8
2,034,556	+				-1.1
2,034,556	+				-0.4
2,034,557	-				+1.0
2,034,560	-				-0.1
2,034,570	+				-0.7
2,034,571	-				-0.2
2,034,571	-				+0.5
2,034,571	-				+1.9
2,034,574	+				-0.6
2,034,588	+				+1.0
2,034,588	+				-1.4
2,034,682	+		DZA65_RS09670	0.13	-1.5
2,034,682	+		DZA65_RS09670	0.13	+0.2
2,034,683	-		DZA65_RS09670	0.13	-1.7
2,034,909	-		DZA65_RS09670	0.27	-1.3
2,034,909	-		DZA65_RS09670	0.27	-2.2
2,034,917	+		DZA65_RS09670	0.28	-0.2
2,034,917	+		DZA65_RS09670	0.28	-1.1
2,034,918	-		DZA65_RS09670	0.28	+1.7
2,034,918	-		DZA65_RS09670	0.28	-0.5
2,034,920	+		DZA65_RS09670	0.28	-0.1
2,034,920	+		DZA65_RS09670	0.28	-0.9
2,034,920	+		DZA65_RS09670	0.28	-0.3
2,034,921	-		DZA65_RS09670	0.28	-0.2
2,034,921	-		DZA65_RS09670	0.28	-0.3
2,034,975	-		DZA65_RS09670	0.31	-0.6
2,035,109	+		DZA65_RS09670	0.39	+1.1
2,035,109	+		DZA65_RS09670	0.39	+0.0
2,035,109	+		DZA65_RS09670	0.39	-2.9
2,035,109	+		DZA65_RS09670	0.39	-0.5
2,035,109	+		DZA65_RS09670	0.39	+1.1
2,035,109	+		DZA65_RS09670	0.39	-0.5
2,035,110	-		DZA65_RS09670	0.40	-0.6
2,035,110	-		DZA65_RS09670	0.40	-0.6
2,035,110	-		DZA65_RS09670	0.40	+0.1
2,035,110	-		DZA65_RS09670	0.40	+1.8
2,035,110	-		DZA65_RS09670	0.40	+0.1
2,035,223	+		DZA65_RS09670	0.46	+0.1
2,035,223	+		DZA65_RS09670	0.46	+0.1
2,035,224	-		DZA65_RS09670	0.47	+0.4
2,035,224	-		DZA65_RS09670	0.47	+0.1
2,035,312	+		DZA65_RS09670	0.52	-0.3
2,035,312	+		DZA65_RS09670	0.52	-0.2
2,035,313	-		DZA65_RS09670	0.52	+0.4
2,035,313	-		DZA65_RS09670	0.52	-0.1
2,035,313	-		DZA65_RS09670	0.52	-2.7
2,035,552	+		DZA65_RS09670	0.67	+0.1
2,035,552	+		DZA65_RS09670	0.67	+0.5
2,035,553	-		DZA65_RS09670	0.67	+0.1
2,035,553	-		DZA65_RS09670	0.67	+0.1
2,035,553	-		DZA65_RS09670	0.67	+0.5
2,035,553	-		DZA65_RS09670	0.67	+0.5
2,035,553	-		DZA65_RS09670	0.67	+0.9
2,035,555	+		DZA65_RS09670	0.67	+0.1
2,035,555	+		DZA65_RS09670	0.67	-0.1
2,035,556	-		DZA65_RS09670	0.67	+0.1
2,035,588	+		DZA65_RS09670	0.69	-0.3
2,035,588	+		DZA65_RS09670	0.69	-1.5
2,035,589	-		DZA65_RS09670	0.69	-0.9
2,035,589	-		DZA65_RS09670	0.69	-0.8
2,035,795	+		DZA65_RS09670	0.82	+0.8
2,035,795	+		DZA65_RS09670	0.82	-1.3
2,035,795	+		DZA65_RS09670	0.82	-1.3
2,035,796	-		DZA65_RS09670	0.82	-0.4
2,035,796	-		DZA65_RS09670	0.82	+0.7
2,035,815	+		DZA65_RS09670	0.83	-1.3
2,035,815	+		DZA65_RS09670	0.83	+0.5
2,035,815	+		DZA65_RS09670	0.83	-0.2
2,035,815	+		DZA65_RS09670	0.83	-0.7
2,035,815	+		DZA65_RS09670	0.83	-2.1
2,035,815	+		DZA65_RS09670	0.83	-0.4
2,035,815	+		DZA65_RS09670	0.83	+1.1
2,035,816	-		DZA65_RS09670	0.83	-0.4
2,035,816	-		DZA65_RS09670	0.83	+2.4
2,035,816	-		DZA65_RS09670	0.83	-0.3
2,035,816	-		DZA65_RS09670	0.83	+0.6
2,035,816	-		DZA65_RS09670	0.83	-1.2
2,035,816	-		DZA65_RS09670	0.83	-1.1
2,035,816	-		DZA65_RS09670	0.83	+2.2
2,035,816	-		DZA65_RS09670	0.83	+0.1
2,035,816	-		DZA65_RS09670	0.83	+0.7
2,035,870	+		DZA65_RS09670	0.86	-0.4
2,035,871	-		DZA65_RS09670	0.86	+0.4
2,035,932	+				-0.4
2,036,002	-				+1.7
2,036,093	+				-0.1
2,036,094	-				-0.5
2,036,094	-				-1.5
2,036,132	+				+0.4
2,036,132	+				+0.1
2,036,144	+				-0.7
2,036,145	-				+0.5
2,036,179	-				-0.2
2,036,240	-				+0.1
2,036,265	+				+0.1
2,036,301	+				-0.6
2,036,313	-				-0.2
2,036,437	+				-1.2
2,036,438	-				-0.5
2,036,456	+				-0.9
2,036,509	-				+1.0
2,036,539	+				-2.4
2,036,539	+				+0.7
2,036,539	+				-0.8
2,036,540	-				-2.0
2,036,573	+				-2.9
2,036,574	-				+0.5
2,036,576	+				-1.5
2,036,577	-				-0.9
2,036,578	+				-2.2
2,036,579	-				+0.4
2,036,579	-				-1.1
2,036,579	-				+0.9
2,036,705	+				-0.6
2,036,819	+		DZA65_RS09675	0.12	-0.2
2,036,820	-		DZA65_RS09675	0.12	+0.4
2,036,820	-		DZA65_RS09675	0.12	-0.0
2,036,820	-		DZA65_RS09675	0.12	+0.9
2,036,820	-		DZA65_RS09675	0.12	+0.4
2,036,820	-		DZA65_RS09675	0.12	+1.1
2,036,820	-		DZA65_RS09675	0.12	-1.0
2,036,820	-		DZA65_RS09675	0.12	+0.3
2,036,841	-		DZA65_RS09675	0.13	-0.4
2,036,841	-		DZA65_RS09675	0.13	+0.3
2,036,843	-		DZA65_RS09675	0.14	+0.8
2,036,843	-		DZA65_RS09675	0.14	-0.9
2,036,843	-		DZA65_RS09675	0.14	+0.2
2,036,931	-		DZA65_RS09675	0.19	+0.1
2,036,931	-		DZA65_RS09675	0.19	-0.2
2,036,931	-		DZA65_RS09675	0.19	+0.4
2,036,931	-		DZA65_RS09675	0.19	-0.2