Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08610

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,820,759	+		DZA65_RS08605	0.75	-1.6
1,820,760	-		DZA65_RS08605	0.75	-0.1
1,820,765	+		DZA65_RS08605	0.75	-0.8
1,820,765	+		DZA65_RS08605	0.75	-0.4
1,820,766	-		DZA65_RS08605	0.75	+1.4
1,820,766	-		DZA65_RS08605	0.75	+1.3
1,820,873	+				-0.8
1,820,873	+		DZA65_RS08605	0.78	-0.5
1,820,873	+		DZA65_RS08605	0.78	-1.4
1,820,873	+		DZA65_RS08605	0.78	+0.4
1,820,873	+		DZA65_RS08605	0.78	+0.0
1,820,873	+		DZA65_RS08605	0.78	-1.0
1,820,873	+		DZA65_RS08605	0.78	+0.2
1,820,874	-		DZA65_RS08605	0.78	+0.5
1,820,874	-		DZA65_RS08605	0.78	-0.5
1,820,874	-		DZA65_RS08605	0.78	+1.9
1,821,113	+		DZA65_RS08605	0.85	-0.0
1,821,113	+		DZA65_RS08605	0.85	+0.2
1,821,113	+		DZA65_RS08605	0.85	-0.8
1,821,113	+		DZA65_RS08605	0.85	+1.0
1,821,114	-		DZA65_RS08605	0.85	-0.1
1,821,149	-		DZA65_RS08605	0.86	+0.9
1,821,149	-		DZA65_RS08605	0.86	+0.2
1,821,149	-		DZA65_RS08605	0.86	+1.8
1,821,228	+		DZA65_RS08605	0.88	-0.1
1,821,229	-		DZA65_RS08605	0.88	+1.0
1,821,229	-		DZA65_RS08605	0.88	-0.1
1,821,229	-		DZA65_RS08605	0.88	-0.2
1,821,232	+		DZA65_RS08605	0.88	+0.8
1,821,232	+		DZA65_RS08605	0.88	-1.8
1,821,232	+		DZA65_RS08605	0.88	+0.2
1,821,232	+		DZA65_RS08605	0.88	-0.3
1,821,233	-		DZA65_RS08605	0.88	-1.1
1,821,233	-		DZA65_RS08605	0.88	+1.2
1,821,233	-		DZA65_RS08605	0.88	-0.3
1,821,255	+		DZA65_RS08605	0.89	-0.6
1,821,255	+		DZA65_RS08605	0.89	+0.2
1,821,255	+		DZA65_RS08605	0.89	-0.4
1,821,256	-		DZA65_RS08605	0.89	+0.3
1,821,256	-		DZA65_RS08605	0.89	-0.2
1,821,256	-		DZA65_RS08605	0.89	-2.1
1,821,256	-		DZA65_RS08605	0.89	+2.0
1,821,335	+				+0.8
1,821,336	-				-2.6
1,821,382	+				-0.6
1,821,383	-				+0.2
1,821,520	+				+0.2
1,821,520	+				-0.0
1,821,520	+				-0.8
1,821,521	-				-0.4
1,821,521	-				-0.4
1,821,521	-				-1.2
1,821,521	-				+0.4
1,821,573	-				+0.2
1,821,573	-				+0.2
1,821,641	+				-0.8
1,821,641	+				-1.0
1,821,641	+				-0.6
1,821,641	+				-0.1
1,821,642	-				-1.4
1,821,642	-				-0.8
1,821,645	-				+0.8
1,821,697	+				-0.7
1,821,697	+				-0.2
1,821,697	+				-0.6
1,821,698	-				-0.2
1,821,755	+				+0.3
1,821,755	+				-0.4
1,821,766	-				-0.4
1,821,766	-				+0.2
1,821,884	+		DZA65_RS08610	0.13	-0.9
1,821,884	+		DZA65_RS08610	0.13	+1.2
1,821,884	+		DZA65_RS08610	0.13	+0.5
1,821,884	+		DZA65_RS08610	0.13	+0.3
1,821,884	+				+0.2
1,821,884	+		DZA65_RS08610	0.13	-0.6
1,821,885	-		DZA65_RS08610	0.13	-0.8
1,821,885	-		DZA65_RS08610	0.13	+2.5
1,821,885	-		DZA65_RS08610	0.13	-0.1
1,821,885	-		DZA65_RS08610	0.13	+0.2
1,822,064	+		DZA65_RS08610	0.26	-2.4
1,822,065	-		DZA65_RS08610	0.26	+1.3
1,822,065	-		DZA65_RS08610	0.26	+0.8
1,822,065	-		DZA65_RS08610	0.26	+1.0
1,822,098	-		DZA65_RS08610	0.28	-0.5
1,822,098	-		DZA65_RS08610	0.28	-1.7
1,822,199	+		DZA65_RS08610	0.35	-2.4
1,822,199	+		DZA65_RS08610	0.35	+0.0
1,822,271	-		DZA65_RS08610	0.40	-1.6
1,822,271	-		DZA65_RS08610	0.40	-0.4
1,822,411	-		DZA65_RS08610	0.50	-1.8
1,822,515	-		DZA65_RS08610	0.57	+1.0
1,822,565	+		DZA65_RS08610	0.60	+0.0
1,822,566	-		DZA65_RS08610	0.61	+0.2
1,822,567	+				+0.8
1,822,567	+		DZA65_RS08610	0.61	-0.7
1,822,567	+		DZA65_RS08610	0.61	+0.8
1,822,668	-		DZA65_RS08610	0.68	-0.4
1,822,709	+		DZA65_RS08610	0.71	+0.4
1,822,709	+		DZA65_RS08610	0.71	+1.3
1,822,709	+		DZA65_RS08610	0.71	-1.4
1,822,709	+		DZA65_RS08610	0.71	+1.0
1,822,710	-		DZA65_RS08610	0.71	-0.8
1,822,710	-		DZA65_RS08610	0.71	+0.2
1,822,710	-		DZA65_RS08610	0.71	-1.9
1,822,710	-		DZA65_RS08610	0.71	+0.2
1,822,710	-		DZA65_RS08610	0.71	+0.2
1,822,710	-		DZA65_RS08610	0.71	+0.7
1,822,715	+		DZA65_RS08610	0.71	+0.5
1,822,715	+		DZA65_RS08610	0.71	-0.1
1,822,715	+		DZA65_RS08610	0.71	-0.1
1,822,715	+		DZA65_RS08610	0.71	+0.6
1,822,721	+		DZA65_RS08610	0.71	+1.4
1,822,735	-		DZA65_RS08610	0.72	+0.7
1,822,789	+		DZA65_RS08610	0.76	-0.8
1,822,789	+		DZA65_RS08610	0.76	-1.1
1,822,790	-		DZA65_RS08610	0.76	+1.4
1,822,804	-		DZA65_RS08610	0.77	+0.8
1,822,804	-		DZA65_RS08610	0.77	+0.8
1,822,952	+		DZA65_RS08610	0.87	+1.2
1,822,958	-		DZA65_RS08610	0.88	+0.4
1,823,129	+				-0.5
1,823,198	+				-0.1
1,823,221	+				+0.2
1,823,297	+				+0.3
1,823,297	+				-1.6
1,823,297	+				+1.3
1,823,297	+				-0.8
1,823,298	-				-1.1
1,823,298	-				+0.2
1,823,452	+		DZA65_RS08615	0.18	+0.0
1,823,452	+		DZA65_RS08615	0.18	+0.4
1,823,453	-		DZA65_RS08615	0.18	-0.1
1,823,650	-		DZA65_RS08615	0.33	+1.6
1,823,682	+		DZA65_RS08615	0.35	-0.3
1,823,682	+		DZA65_RS08615	0.35	-1.2
1,823,682	+		DZA65_RS08615	0.35	+1.5
1,823,682	+		DZA65_RS08615	0.35	-1.3
1,823,682	+		DZA65_RS08615	0.35	+1.4
1,823,683	-		DZA65_RS08615	0.35	-1.7
1,823,683	-		DZA65_RS08615	0.35	-0.6
1,823,683	-		DZA65_RS08615	0.35	+0.2
1,823,764	-		DZA65_RS08615	0.41	-0.3
1,823,781	+		DZA65_RS08615	0.42	-1.4
1,823,782	-		DZA65_RS08615	0.42	-2.6
1,823,782	-		DZA65_RS08615	0.42	-0.5
1,823,782	-		DZA65_RS08615	0.42	+0.2
1,823,832	+		DZA65_RS08615	0.46	+1.1
1,823,872	+		DZA65_RS08615	0.49	+0.2
1,823,872	+		DZA65_RS08615	0.49	-0.0
1,823,873	-		DZA65_RS08615	0.49	+0.2
1,823,873	-		DZA65_RS08615	0.49	+0.2
1,823,873	-		DZA65_RS08615	0.49	+0.9
1,823,917	-		DZA65_RS08615	0.52	+0.3
1,824,022	-		DZA65_RS08615	0.60	-0.4
1,824,066	+		DZA65_RS08615	0.63	+0.2
1,824,111	+		DZA65_RS08615	0.66	-1.4
1,824,111	+		DZA65_RS08615	0.66	-1.4
1,824,111	+		DZA65_RS08615	0.66	+1.2
1,824,111	+		DZA65_RS08615	0.66	-0.3
1,824,111	+		DZA65_RS08615	0.66	+1.1
1,824,111	+		DZA65_RS08615	0.66	+0.2
1,824,112	-		DZA65_RS08615	0.67	-0.1
1,824,112	-		DZA65_RS08615	0.67	-0.3
1,824,112	-		DZA65_RS08615	0.67	+2.1
1,824,112	-		DZA65_RS08615	0.67	+1.9
1,824,112	-		DZA65_RS08615	0.67	-0.0
1,824,112	-		DZA65_RS08615	0.67	-0.7
1,824,112	-		DZA65_RS08615	0.67	+0.2
1,824,112	-		DZA65_RS08615	0.67	+0.6
1,824,112	-		DZA65_RS08615	0.67	+0.1