Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01480 and DZA65_RS01485 are separated by 66 nucleotides DZA65_RS01485 and DZA65_RS01490 are separated by 179 nucleotides DZA65_RS01490 and DZA65_RS01495 overlap by 4 nucleotides
DZA65_RS01480: DZA65_RS01480 - metalloprotease PmbA, at 327,314 to 328,654
_RS01480
DZA65_RS01485: DZA65_RS01485 - nucleoside diphosphate kinase regulator, at 328,721 to 329,131
_RS01485
DZA65_RS01490: DZA65_RS01490 - PTS phosphocarrier protein NPr, at 329,311 to 329,583
_RS01490
DZA65_RS01495: DZA65_RS01495 - RNase adapter RapZ, at 329,580 to 330,434
_RS01495
Position (kb) 328
329
330 Strain fitness (log2 ratio) -2
-1
0
1
2 at 327.790 kb on + strand, within DZA65_RS01480 at 327.800 kb on + strand, within DZA65_RS01480 at 327.832 kb on + strand, within DZA65_RS01480 at 327.832 kb on + strand, within DZA65_RS01480 at 327.832 kb on + strand, within DZA65_RS01480 at 327.832 kb on + strand, within DZA65_RS01480 at 327.833 kb on - strand, within DZA65_RS01480 at 327.833 kb on - strand, within DZA65_RS01480 at 327.833 kb on - strand, within DZA65_RS01480 at 327.845 kb on + strand, within DZA65_RS01480 at 327.845 kb on + strand, within DZA65_RS01480 at 327.845 kb on + strand, within DZA65_RS01480 at 327.845 kb on + strand, within DZA65_RS01480 at 327.845 kb on + strand, within DZA65_RS01480 at 327.845 kb on + strand, within DZA65_RS01480 at 327.846 kb on - strand, within DZA65_RS01480 at 327.846 kb on - strand, within DZA65_RS01480 at 327.846 kb on - strand, within DZA65_RS01480 at 327.846 kb on - strand, within DZA65_RS01480 at 327.914 kb on + strand, within DZA65_RS01480 at 327.914 kb on + strand, within DZA65_RS01480 at 327.915 kb on - strand, within DZA65_RS01480 at 327.915 kb on - strand, within DZA65_RS01480 at 327.915 kb on - strand, within DZA65_RS01480 at 327.915 kb on - strand, within DZA65_RS01480 at 327.915 kb on - strand, within DZA65_RS01480 at 327.920 kb on + strand, within DZA65_RS01480 at 327.920 kb on + strand, within DZA65_RS01480 at 327.920 kb on + strand, within DZA65_RS01480 at 327.920 kb on + strand, within DZA65_RS01480 at 327.920 kb on + strand, within DZA65_RS01480 at 327.921 kb on - strand, within DZA65_RS01480 at 328.114 kb on + strand, within DZA65_RS01480 at 328.115 kb on - strand, within DZA65_RS01480 at 328.115 kb on - strand, within DZA65_RS01480 at 328.270 kb on - strand, within DZA65_RS01480 at 328.295 kb on + strand, within DZA65_RS01480 at 328.295 kb on + strand, within DZA65_RS01480 at 328.295 kb on + strand, within DZA65_RS01480 at 328.295 kb on + strand, within DZA65_RS01480 at 328.295 kb on + strand, within DZA65_RS01480 at 328.296 kb on - strand, within DZA65_RS01480 at 328.296 kb on - strand, within DZA65_RS01480 at 328.306 kb on + strand, within DZA65_RS01480 at 328.306 kb on + strand, within DZA65_RS01480 at 328.307 kb on - strand, within DZA65_RS01480 at 328.348 kb on + strand, within DZA65_RS01480 at 328.348 kb on + strand, within DZA65_RS01480 at 328.349 kb on - strand, within DZA65_RS01480 at 328.349 kb on - strand, within DZA65_RS01480 at 328.552 kb on + strand at 328.552 kb on + strand at 328.552 kb on + strand at 328.553 kb on - strand at 328.553 kb on - strand at 328.553 kb on - strand at 328.553 kb on - strand at 328.553 kb on - strand at 328.650 kb on + strand at 328.651 kb on - strand at 328.652 kb on + strand at 328.652 kb on + strand at 328.652 kb on + strand at 328.652 kb on + strand at 328.652 kb on + strand at 328.652 kb on + strand at 328.653 kb on - strand at 328.653 kb on - strand at 328.653 kb on - strand at 328.653 kb on - strand at 328.653 kb on - strand at 328.653 kb on - strand at 328.659 kb on + strand at 328.659 kb on + strand at 328.659 kb on + strand at 328.660 kb on - strand at 328.708 kb on + strand at 328.731 kb on + strand at 328.731 kb on + strand at 328.756 kb on - strand at 328.813 kb on + strand, within DZA65_RS01485 at 328.813 kb on + strand, within DZA65_RS01485 at 328.814 kb on - strand, within DZA65_RS01485 at 328.814 kb on - strand, within DZA65_RS01485 at 328.814 kb on - strand, within DZA65_RS01485 at 328.814 kb on - strand, within DZA65_RS01485 at 328.918 kb on + strand, within DZA65_RS01485 at 328.918 kb on + strand, within DZA65_RS01485 at 328.918 kb on + strand, within DZA65_RS01485 at 328.918 kb on + strand, within DZA65_RS01485 at 328.919 kb on - strand, within DZA65_RS01485 at 329.050 kb on + strand at 329.050 kb on + strand, within DZA65_RS01485 at 329.125 kb on + strand at 329.125 kb on + strand at 329.125 kb on + strand at 329.125 kb on + strand at 329.126 kb on - strand at 329.131 kb on + strand at 329.131 kb on + strand at 329.131 kb on + strand at 329.131 kb on + strand at 329.131 kb on + strand at 329.132 kb on - strand at 329.132 kb on - strand at 329.132 kb on - strand at 329.132 kb on - strand at 329.153 kb on + strand at 329.154 kb on - strand at 329.154 kb on - strand at 329.160 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.191 kb on + strand at 329.192 kb on - strand at 329.192 kb on - strand at 329.192 kb on - strand at 329.192 kb on - strand at 329.192 kb on - strand at 329.207 kb on + strand at 329.207 kb on + strand at 329.208 kb on - strand at 329.208 kb on - strand at 329.234 kb on + strand at 329.235 kb on - strand at 329.302 kb on + strand at 329.312 kb on + strand at 329.313 kb on - strand at 329.313 kb on - strand at 329.313 kb on - strand at 329.604 kb on - strand at 329.645 kb on - strand at 329.645 kb on - strand at 329.666 kb on + strand, within DZA65_RS01495 at 329.668 kb on + strand, within DZA65_RS01495 at 329.668 kb on + strand, within DZA65_RS01495 at 329.668 kb on + strand, within DZA65_RS01495 at 329.668 kb on + strand, within DZA65_RS01495 at 329.669 kb on - strand, within DZA65_RS01495 at 329.669 kb on - strand at 329.669 kb on - strand, within DZA65_RS01495 at 329.712 kb on - strand, within DZA65_RS01495 at 329.712 kb on - strand, within DZA65_RS01495 at 329.716 kb on + strand, within DZA65_RS01495 at 329.716 kb on + strand at 329.717 kb on - strand, within DZA65_RS01495 at 329.717 kb on - strand, within DZA65_RS01495 at 329.717 kb on - strand at 329.761 kb on + strand, within DZA65_RS01495 at 329.762 kb on - strand, within DZA65_RS01495 at 329.776 kb on + strand, within DZA65_RS01495 at 329.776 kb on + strand, within DZA65_RS01495 at 329.776 kb on + strand, within DZA65_RS01495 at 329.776 kb on + strand, within DZA65_RS01495 at 329.776 kb on + strand, within DZA65_RS01495 at 329.777 kb on - strand, within DZA65_RS01495 at 329.777 kb on - strand, within DZA65_RS01495 at 329.777 kb on - strand, within DZA65_RS01495 at 329.900 kb on - strand, within DZA65_RS01495 at 329.900 kb on - strand, within DZA65_RS01495 at 329.900 kb on - strand, within DZA65_RS01495 at 329.900 kb on - strand, within DZA65_RS01495 at 329.900 kb on - strand, within DZA65_RS01495 at 329.900 kb on - strand, within DZA65_RS01495 at 330.029 kb on + strand, within DZA65_RS01495 at 330.030 kb on - strand, within DZA65_RS01495 at 330.030 kb on - strand at 330.089 kb on + strand, within DZA65_RS01495
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 327,790 + DZA65_RS01480 0.35 -0.5 327,800 + DZA65_RS01480 0.36 -1.6 327,832 + DZA65_RS01480 0.39 +0.8 327,832 + DZA65_RS01480 0.39 -0.5 327,832 + DZA65_RS01480 0.39 +0.3 327,832 + DZA65_RS01480 0.39 +0.1 327,833 - DZA65_RS01480 0.39 +0.2 327,833 - DZA65_RS01480 0.39 -0.2 327,833 - DZA65_RS01480 0.39 +0.9 327,845 + DZA65_RS01480 0.40 +1.1 327,845 + DZA65_RS01480 0.40 +0.4 327,845 + DZA65_RS01480 0.40 -1.2 327,845 + DZA65_RS01480 0.40 +0.3 327,845 + DZA65_RS01480 0.40 -0.6 327,845 + DZA65_RS01480 0.40 -0.4 327,846 - DZA65_RS01480 0.40 +1.6 327,846 - DZA65_RS01480 0.40 +0.5 327,846 - DZA65_RS01480 0.40 -1.2 327,846 - DZA65_RS01480 0.40 -1.2 327,914 + DZA65_RS01480 0.45 +0.4 327,914 + DZA65_RS01480 0.45 +0.1 327,915 - DZA65_RS01480 0.45 -0.6 327,915 - DZA65_RS01480 0.45 +1.0 327,915 - DZA65_RS01480 0.45 -0.8 327,915 - DZA65_RS01480 0.45 -0.8 327,915 - DZA65_RS01480 0.45 +0.3 327,920 + DZA65_RS01480 0.45 -1.6 327,920 + DZA65_RS01480 0.45 +0.6 327,920 + DZA65_RS01480 0.45 +0.2 327,920 + DZA65_RS01480 0.45 -0.6 327,920 + DZA65_RS01480 0.45 -0.8 327,921 - DZA65_RS01480 0.45 +1.4 328,114 + DZA65_RS01480 0.60 +1.5 328,115 - DZA65_RS01480 0.60 +1.6 328,115 - DZA65_RS01480 0.60 -1.3 328,270 - DZA65_RS01480 0.71 +0.2 328,295 + DZA65_RS01480 0.73 -0.6 328,295 + DZA65_RS01480 0.73 +0.4 328,295 + DZA65_RS01480 0.73 +0.3 328,295 + DZA65_RS01480 0.73 -2.2 328,295 + DZA65_RS01480 0.73 -0.8 328,296 - DZA65_RS01480 0.73 +0.3 328,296 - DZA65_RS01480 0.73 -0.3 328,306 + DZA65_RS01480 0.74 -0.2 328,306 + DZA65_RS01480 0.74 +0.8 328,307 - DZA65_RS01480 0.74 +0.3 328,348 + DZA65_RS01480 0.77 -2.2 328,348 + DZA65_RS01480 0.77 +0.7 328,349 - DZA65_RS01480 0.77 -1.0 328,349 - DZA65_RS01480 0.77 -0.4 328,552 + +1.0 328,552 + -0.7 328,552 + -0.2 328,553 - -0.4 328,553 - +1.2 328,553 - -0.8 328,553 - +0.1 328,553 - -2.2 328,650 + +1.8 328,651 - -0.1 328,652 + +0.0 328,652 + -0.5 328,652 + +0.8 328,652 + -0.5 328,652 + +0.1 328,652 + +0.5 328,653 - -0.2 328,653 - -0.1 328,653 - +1.2 328,653 - -0.2 328,653 - -0.4 328,653 - -0.2 328,659 + +1.1 328,659 + -0.6 328,659 + +1.1 328,660 - +0.5 328,708 + -1.0 328,731 + -1.5 328,731 + +1.1 328,756 - +0.9 328,813 + DZA65_RS01485 0.22 -0.2 328,813 + DZA65_RS01485 0.22 +0.4 328,814 - DZA65_RS01485 0.23 -0.5 328,814 - DZA65_RS01485 0.23 +0.7 328,814 - DZA65_RS01485 0.23 +0.4 328,814 - DZA65_RS01485 0.23 +1.1 328,918 + DZA65_RS01485 0.48 -0.2 328,918 + DZA65_RS01485 0.48 +0.4 328,918 + DZA65_RS01485 0.48 +0.2 328,918 + DZA65_RS01485 0.48 +1.8 328,919 - DZA65_RS01485 0.48 +1.5 329,050 + -0.8 329,050 + DZA65_RS01485 0.80 +1.3 329,125 + -0.2 329,125 + +1.0 329,125 + -0.1 329,125 + +0.1 329,126 - +0.1 329,131 + -0.7 329,131 + +0.2 329,131 + +0.2 329,131 + -0.7 329,131 + +0.4 329,132 - +0.6 329,132 - -0.0 329,132 - -1.8 329,132 - -0.3 329,153 + -1.1 329,154 - -0.2 329,154 - +0.4 329,160 + +0.9 329,191 + +0.8 329,191 + +1.1 329,191 + +0.5 329,191 + +0.4 329,191 + +0.5 329,191 + -0.0 329,191 + -1.4 329,191 + +0.5 329,191 + +0.9 329,191 + +0.8 329,191 + +0.5 329,191 + -0.2 329,191 + -0.6 329,191 + -1.2 329,191 + +0.3 329,191 + +0.4 329,191 + +0.8 329,191 + -0.8 329,192 - -1.1 329,192 - -1.8 329,192 - +1.3 329,192 - -0.2 329,192 - -1.7 329,207 + +0.2 329,207 + -0.2 329,208 - +0.1 329,208 - -1.1 329,234 + +0.8 329,235 - -0.1 329,302 + -1.2 329,312 + +0.4 329,313 - +0.3 329,313 - -1.7 329,313 - +0.3 329,604 - -0.4 329,645 - +0.5 329,645 - -1.1 329,666 + DZA65_RS01495 0.10 +0.3 329,668 + DZA65_RS01495 0.10 +1.4 329,668 + DZA65_RS01495 0.10 -1.1 329,668 + DZA65_RS01495 0.10 -1.8 329,668 + DZA65_RS01495 0.10 -0.3 329,669 - DZA65_RS01495 0.10 -1.4 329,669 - -0.6 329,669 - DZA65_RS01495 0.10 -0.2 329,712 - DZA65_RS01495 0.15 +0.2 329,712 - DZA65_RS01495 0.15 -1.6 329,716 + DZA65_RS01495 0.16 -1.0 329,716 + -1.2 329,717 - DZA65_RS01495 0.16 +0.5 329,717 - DZA65_RS01495 0.16 -1.8 329,717 - -0.2 329,761 + DZA65_RS01495 0.21 -1.1 329,762 - DZA65_RS01495 0.21 +0.0 329,776 + DZA65_RS01495 0.23 -0.2 329,776 + DZA65_RS01495 0.23 -0.8 329,776 + DZA65_RS01495 0.23 -0.2 329,776 + DZA65_RS01495 0.23 -1.0 329,776 + DZA65_RS01495 0.23 +0.1 329,777 - DZA65_RS01495 0.23 -0.2 329,777 - DZA65_RS01495 0.23 +0.3 329,777 - DZA65_RS01495 0.23 -0.5 329,900 - DZA65_RS01495 0.37 -0.8 329,900 - DZA65_RS01495 0.37 -0.6 329,900 - DZA65_RS01495 0.37 +0.4 329,900 - DZA65_RS01495 0.37 +0.1 329,900 - DZA65_RS01495 0.37 -2.2 329,900 - DZA65_RS01495 0.37 -1.0 330,029 + DZA65_RS01495 0.53 -1.1 330,030 - DZA65_RS01495 0.53 -0.8 330,030 - -0.2 330,089 + DZA65_RS01495 0.60 -0.2
Or see this region's nucleotide sequence