Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00245 and DZA65_RS00250 are separated by 27 nucleotides DZA65_RS00250 and DZA65_RS00255 are separated by 16 nucleotides DZA65_RS00255 and DZA65_RS00260 are separated by 710 nucleotides
DZA65_RS00245: DZA65_RS00245 - ABC transporter ATP-binding protein, at 58,754 to 59,530
_RS00245
DZA65_RS00250: DZA65_RS00250 - ABC transporter permease subunit, at 59,558 to 60,370
_RS00250
DZA65_RS00255: DZA65_RS00255 - ABC transporter substrate-binding protein, at 60,387 to 61,442
_RS00255
DZA65_RS00260: DZA65_RS00260 - DUF3053 domain-containing protein, at 62,153 to 62,863
_RS00260
Position (kb) 60
61
62 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 59.493 kb on + strand at 59.494 kb on - strand at 59.513 kb on - strand at 59.530 kb on + strand at 59.530 kb on + strand at 59.530 kb on + strand at 59.531 kb on - strand at 59.531 kb on - strand at 59.571 kb on + strand at 59.571 kb on + strand at 59.571 kb on + strand at 59.572 kb on - strand at 59.572 kb on - strand at 59.572 kb on - strand at 59.572 kb on - strand at 59.572 kb on - strand at 59.649 kb on + strand, within DZA65_RS00250 at 59.649 kb on + strand, within DZA65_RS00250 at 59.649 kb on + strand, within DZA65_RS00250 at 59.649 kb on + strand, within DZA65_RS00250 at 59.649 kb on + strand, within DZA65_RS00250 at 59.649 kb on + strand, within DZA65_RS00250 at 59.649 kb on + strand, within DZA65_RS00250 at 59.650 kb on - strand, within DZA65_RS00250 at 59.650 kb on - strand, within DZA65_RS00250 at 59.650 kb on - strand, within DZA65_RS00250 at 59.650 kb on - strand, within DZA65_RS00250 at 59.676 kb on + strand, within DZA65_RS00250 at 59.812 kb on + strand, within DZA65_RS00250 at 59.812 kb on + strand, within DZA65_RS00250 at 59.813 kb on - strand, within DZA65_RS00250 at 59.813 kb on - strand, within DZA65_RS00250 at 59.813 kb on - strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.892 kb on + strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.893 kb on - strand, within DZA65_RS00250 at 59.954 kb on + strand, within DZA65_RS00250 at 59.954 kb on + strand, within DZA65_RS00250 at 59.955 kb on - strand, within DZA65_RS00250 at 60.105 kb on - strand, within DZA65_RS00250 at 60.285 kb on + strand, within DZA65_RS00250 at 60.286 kb on - strand, within DZA65_RS00250 at 60.286 kb on - strand, within DZA65_RS00250 at 60.305 kb on + strand at 60.351 kb on + strand at 60.351 kb on + strand at 60.352 kb on - strand at 60.352 kb on - strand at 60.352 kb on - strand at 60.388 kb on + strand at 60.388 kb on + strand at 60.388 kb on + strand at 60.388 kb on + strand at 60.388 kb on + strand at 60.388 kb on + strand at 60.388 kb on + strand at 60.389 kb on - strand at 60.389 kb on - strand at 60.389 kb on - strand at 60.684 kb on - strand, within DZA65_RS00255 at 60.736 kb on + strand, within DZA65_RS00255 at 60.736 kb on + strand, within DZA65_RS00255 at 60.737 kb on - strand, within DZA65_RS00255 at 60.737 kb on - strand, within DZA65_RS00255 at 61.015 kb on + strand, within DZA65_RS00255 at 61.015 kb on + strand, within DZA65_RS00255 at 61.015 kb on + strand, within DZA65_RS00255 at 61.016 kb on - strand, within DZA65_RS00255 at 61.076 kb on + strand, within DZA65_RS00255 at 61.077 kb on - strand, within DZA65_RS00255 at 61.143 kb on + strand, within DZA65_RS00255 at 61.214 kb on + strand, within DZA65_RS00255 at 61.214 kb on + strand, within DZA65_RS00255 at 61.214 kb on + strand, within DZA65_RS00255 at 61.215 kb on - strand, within DZA65_RS00255 at 61.215 kb on - strand, within DZA65_RS00255 at 61.216 kb on + strand, within DZA65_RS00255 at 61.216 kb on + strand, within DZA65_RS00255 at 61.216 kb on + strand, within DZA65_RS00255 at 61.217 kb on - strand, within DZA65_RS00255 at 61.217 kb on - strand, within DZA65_RS00255 at 61.217 kb on - strand, within DZA65_RS00255 at 61.237 kb on + strand, within DZA65_RS00255 at 61.237 kb on + strand, within DZA65_RS00255 at 61.237 kb on + strand, within DZA65_RS00255 at 61.237 kb on + strand, within DZA65_RS00255 at 61.238 kb on - strand, within DZA65_RS00255 at 61.238 kb on - strand, within DZA65_RS00255 at 61.238 kb on - strand, within DZA65_RS00255 at 61.269 kb on - strand, within DZA65_RS00255 at 61.273 kb on + strand, within DZA65_RS00255 at 61.273 kb on + strand, within DZA65_RS00255 at 61.273 kb on + strand, within DZA65_RS00255 at 61.273 kb on + strand, within DZA65_RS00255 at 61.273 kb on + strand, within DZA65_RS00255 at 61.274 kb on - strand, within DZA65_RS00255 at 61.274 kb on - strand, within DZA65_RS00255 at 61.274 kb on - strand, within DZA65_RS00255 at 61.274 kb on - strand, within DZA65_RS00255 at 61.274 kb on - strand, within DZA65_RS00255 at 61.274 kb on - strand, within DZA65_RS00255 at 61.339 kb on + strand at 61.340 kb on - strand at 61.340 kb on - strand at 61.340 kb on - strand at 61.422 kb on + strand at 61.423 kb on - strand at 61.423 kb on - strand at 61.423 kb on - strand at 61.475 kb on + strand at 61.475 kb on + strand at 61.475 kb on + strand at 61.512 kb on + strand at 61.512 kb on + strand at 61.528 kb on + strand at 61.595 kb on + strand at 61.595 kb on + strand at 61.595 kb on + strand at 61.596 kb on - strand at 61.659 kb on + strand at 61.660 kb on - strand at 61.660 kb on - strand at 61.694 kb on - strand at 61.730 kb on + strand at 61.742 kb on + strand at 61.746 kb on - strand at 61.776 kb on + strand at 61.830 kb on + strand at 61.830 kb on + strand at 61.830 kb on + strand at 61.830 kb on + strand at 61.830 kb on + strand at 61.830 kb on + strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.831 kb on - strand at 61.846 kb on - strand at 61.846 kb on - strand at 61.865 kb on + strand at 61.865 kb on + strand at 61.866 kb on - strand at 61.885 kb on + strand at 61.885 kb on + strand at 61.886 kb on - strand at 61.886 kb on - strand at 61.927 kb on + strand at 61.927 kb on + strand at 61.927 kb on + strand at 61.927 kb on + strand at 61.927 kb on + strand at 61.929 kb on + strand at 61.930 kb on - strand at 61.930 kb on - strand at 61.930 kb on - strand at 61.958 kb on + strand at 61.958 kb on + strand at 61.958 kb on + strand at 61.958 kb on + strand at 61.958 kb on + strand at 61.959 kb on - strand at 61.959 kb on - strand at 61.976 kb on + strand at 62.059 kb on + strand at 62.065 kb on + strand at 62.065 kb on + strand at 62.066 kb on - strand at 62.066 kb on - strand at 62.066 kb on - strand at 62.139 kb on - strand at 62.148 kb on + strand at 62.148 kb on + strand at 62.148 kb on + strand at 62.148 kb on + strand at 62.149 kb on - strand at 62.149 kb on - strand at 62.149 kb on - strand at 62.149 kb on - strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.151 kb on + strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.152 kb on - strand at 62.168 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.197 kb on + strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.266 kb on + strand, within DZA65_RS00260 at 62.266 kb on + strand, within DZA65_RS00260 at 62.267 kb on - strand, within DZA65_RS00260 at 62.267 kb on - strand, within DZA65_RS00260 at 62.351 kb on - strand, within DZA65_RS00260 at 62.351 kb on - strand, within DZA65_RS00260 at 62.360 kb on + strand, within DZA65_RS00260 at 62.361 kb on - strand, within DZA65_RS00260 at 62.361 kb on - strand, within DZA65_RS00260 at 62.361 kb on - strand, within DZA65_RS00260 at 62.361 kb on - strand, within DZA65_RS00260 at 62.361 kb on - strand, within DZA65_RS00260 at 62.361 kb on - strand, within DZA65_RS00260
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 59,493 + +0.1 59,494 - +0.5 59,513 - -1.5 59,530 + +0.4 59,530 + -0.0 59,530 + -1.3 59,531 - -0.8 59,531 - -0.2 59,571 + -0.5 59,571 + -1.3 59,571 + +0.4 59,572 - +0.1 59,572 - -0.6 59,572 - +0.7 59,572 - +0.6 59,572 - -0.6 59,649 + DZA65_RS00250 0.11 -0.6 59,649 + DZA65_RS00250 0.11 +0.0 59,649 + DZA65_RS00250 0.11 -0.2 59,649 + DZA65_RS00250 0.11 +1.3 59,649 + DZA65_RS00250 0.11 -0.0 59,649 + DZA65_RS00250 0.11 -0.5 59,649 + DZA65_RS00250 0.11 +0.2 59,650 - DZA65_RS00250 0.11 -0.2 59,650 - DZA65_RS00250 0.11 +0.5 59,650 - DZA65_RS00250 0.11 -1.2 59,650 - DZA65_RS00250 0.11 -1.3 59,676 + DZA65_RS00250 0.15 +0.7 59,812 + DZA65_RS00250 0.31 +1.6 59,812 + DZA65_RS00250 0.31 -0.1 59,813 - DZA65_RS00250 0.31 -2.2 59,813 - DZA65_RS00250 0.31 +1.1 59,813 - DZA65_RS00250 0.31 -0.3 59,892 + DZA65_RS00250 0.41 +0.4 59,892 + DZA65_RS00250 0.41 -0.6 59,892 + DZA65_RS00250 0.41 -1.8 59,892 + DZA65_RS00250 0.41 +0.8 59,892 + DZA65_RS00250 0.41 +0.5 59,892 + DZA65_RS00250 0.41 -0.6 59,892 + DZA65_RS00250 0.41 -0.5 59,893 - DZA65_RS00250 0.41 -0.1 59,893 - DZA65_RS00250 0.41 +2.2 59,893 - DZA65_RS00250 0.41 -2.9 59,893 - DZA65_RS00250 0.41 +0.5 59,893 - DZA65_RS00250 0.41 +1.1 59,893 - DZA65_RS00250 0.41 +0.3 59,893 - DZA65_RS00250 0.41 -0.3 59,893 - DZA65_RS00250 0.41 +1.6 59,893 - DZA65_RS00250 0.41 -1.5 59,893 - DZA65_RS00250 0.41 -0.3 59,893 - DZA65_RS00250 0.41 -1.0 59,893 - DZA65_RS00250 0.41 +1.7 59,893 - DZA65_RS00250 0.41 +0.3 59,893 - DZA65_RS00250 0.41 -0.2 59,893 - DZA65_RS00250 0.41 -0.1 59,893 - DZA65_RS00250 0.41 -0.5 59,954 + DZA65_RS00250 0.49 -0.7 59,954 + DZA65_RS00250 0.49 +0.1 59,955 - DZA65_RS00250 0.49 -2.3 60,105 - DZA65_RS00250 0.67 +2.4 60,285 + DZA65_RS00250 0.89 +0.4 60,286 - DZA65_RS00250 0.90 -0.2 60,286 - DZA65_RS00250 0.90 -1.1 60,305 + -0.8 60,351 + -0.2 60,351 + -0.2 60,352 - -0.8 60,352 - +1.4 60,352 - -0.5 60,388 + -0.2 60,388 + +0.0 60,388 + +0.3 60,388 + +0.9 60,388 + -0.1 60,388 + -0.7 60,388 + -1.5 60,389 - +0.8 60,389 - -0.5 60,389 - +0.4 60,684 - DZA65_RS00255 0.28 -0.2 60,736 + DZA65_RS00255 0.33 +1.3 60,736 + DZA65_RS00255 0.33 -0.4 60,737 - DZA65_RS00255 0.33 +0.4 60,737 - DZA65_RS00255 0.33 -0.3 61,015 + DZA65_RS00255 0.59 +0.2 61,015 + DZA65_RS00255 0.59 -0.3 61,015 + DZA65_RS00255 0.59 -0.9 61,016 - DZA65_RS00255 0.60 +1.2 61,076 + DZA65_RS00255 0.65 -0.3 61,077 - DZA65_RS00255 0.65 -1.8 61,143 + DZA65_RS00255 0.72 +0.4 61,214 + DZA65_RS00255 0.78 -1.3 61,214 + DZA65_RS00255 0.78 -2.2 61,214 + DZA65_RS00255 0.78 -0.4 61,215 - DZA65_RS00255 0.78 +0.1 61,215 - DZA65_RS00255 0.78 -1.2 61,216 + DZA65_RS00255 0.79 +2.8 61,216 + DZA65_RS00255 0.79 -2.4 61,216 + DZA65_RS00255 0.79 +2.4 61,217 - DZA65_RS00255 0.79 -2.0 61,217 - DZA65_RS00255 0.79 +1.1 61,217 - DZA65_RS00255 0.79 +0.8 61,237 + DZA65_RS00255 0.80 -0.8 61,237 + DZA65_RS00255 0.80 -0.9 61,237 + DZA65_RS00255 0.80 -0.6 61,237 + DZA65_RS00255 0.80 +0.2 61,238 - DZA65_RS00255 0.81 +0.8 61,238 - DZA65_RS00255 0.81 +0.2 61,238 - DZA65_RS00255 0.81 +1.4 61,269 - DZA65_RS00255 0.84 -0.6 61,273 + DZA65_RS00255 0.84 -0.7 61,273 + DZA65_RS00255 0.84 -0.1 61,273 + DZA65_RS00255 0.84 +1.8 61,273 + DZA65_RS00255 0.84 -2.0 61,273 + DZA65_RS00255 0.84 -2.1 61,274 - DZA65_RS00255 0.84 -2.0 61,274 - DZA65_RS00255 0.84 -0.5 61,274 - DZA65_RS00255 0.84 +0.3 61,274 - DZA65_RS00255 0.84 -0.5 61,274 - DZA65_RS00255 0.84 +0.1 61,274 - DZA65_RS00255 0.84 -0.1 61,339 + +2.0 61,340 - +0.2 61,340 - -0.4 61,340 - -0.8 61,422 + +0.6 61,423 - -0.6 61,423 - -0.4 61,423 - +1.2 61,475 + -0.4 61,475 + +0.8 61,475 + +0.2 61,512 + +1.4 61,512 + -0.2 61,528 + -0.6 61,595 + -0.6 61,595 + +0.1 61,595 + +0.2 61,596 - -0.2 61,659 + +1.8 61,660 - +0.3 61,660 - +0.5 61,694 - -0.3 61,730 + +0.5 61,742 + +0.0 61,746 - -1.9 61,776 + -1.0 61,830 + +2.6 61,830 + -0.2 61,830 + -1.9 61,830 + -1.5 61,830 + -0.1 61,830 + -1.1 61,831 - +0.5 61,831 - -0.3 61,831 - -1.0 61,831 - -0.8 61,831 - -0.8 61,831 - -0.2 61,831 - -1.8 61,831 - +0.6 61,846 - -2.3 61,846 - +0.5 61,865 + -0.0 61,865 + -2.3 61,866 - +0.6 61,885 + -2.1 61,885 + -0.3 61,886 - -0.8 61,886 - -0.2 61,927 + -0.8 61,927 + +0.5 61,927 + +1.0 61,927 + -1.0 61,927 + -0.6 61,929 + -1.1 61,930 - +0.5 61,930 - -0.2 61,930 - -2.2 61,958 + +0.1 61,958 + +2.4 61,958 + -1.2 61,958 + +0.5 61,958 + +0.4 61,959 - -0.0 61,959 - -0.3 61,976 + +0.8 62,059 + -0.2 62,065 + +0.4 62,065 + +0.7 62,066 - +0.0 62,066 - +0.2 62,066 - -1.2 62,139 - +1.0 62,148 + +2.5 62,148 + +0.4 62,148 + -1.1 62,148 + +1.0 62,149 - -1.2 62,149 - +0.6 62,149 - -0.8 62,149 - +0.6 62,151 + -0.2 62,151 + -1.2 62,151 + +0.6 62,151 + -0.1 62,151 + +0.1 62,151 + +0.8 62,151 + +1.2 62,151 + +0.8 62,151 + -0.5 62,151 + +0.1 62,152 - +0.2 62,152 - -0.3 62,152 - -2.2 62,152 - -0.4 62,152 - -1.1 62,152 - +0.3 62,152 - -0.5 62,152 - -0.7 62,168 + -0.8 62,197 + -1.8 62,197 + +0.8 62,197 + -0.1 62,197 + -1.6 62,197 + -0.0 62,197 + +0.2 62,197 + +0.1 62,197 + -0.7 62,197 + -0.8 62,197 + +1.3 62,197 + -0.7 62,197 + -0.8 62,198 - -0.6 62,198 - -0.3 62,198 - +0.8 62,198 - +1.4 62,198 - +0.5 62,198 - +1.1 62,198 - +1.3 62,198 - +0.1 62,198 - -0.7 62,198 - -0.0 62,198 - +0.1 62,198 - +0.1 62,266 + DZA65_RS00260 0.16 -0.4 62,266 + DZA65_RS00260 0.16 +0.2 62,267 - DZA65_RS00260 0.16 +0.3 62,267 - DZA65_RS00260 0.16 +0.7 62,351 - DZA65_RS00260 0.28 -0.2 62,351 - DZA65_RS00260 0.28 -0.3 62,360 + DZA65_RS00260 0.29 +0.7 62,361 - DZA65_RS00260 0.29 +1.0 62,361 - DZA65_RS00260 0.29 -0.2 62,361 - DZA65_RS00260 0.29 -2.3 62,361 - DZA65_RS00260 0.29 -0.1 62,361 - DZA65_RS00260 0.29 +0.5 62,361 - DZA65_RS00260 0.29 +0.4
Or see this region's nucleotide sequence