Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22100

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,777,011	+		DZA65_RS22095	0.30	+0.1
4,777,334	+		DZA65_RS22095	0.55	-0.4
4,777,335	-		DZA65_RS22095	0.55	+0.1
4,777,342	+		DZA65_RS22095	0.56	+0.8
4,777,342	+		DZA65_RS22095	0.56	+1.1
4,777,343	-		DZA65_RS22095	0.56	-0.3
4,777,427	+		DZA65_RS22095	0.62	+0.1
4,777,427	+		DZA65_RS22095	0.62	+0.6
4,777,427	+		DZA65_RS22095	0.62	+0.8
4,777,427	+		DZA65_RS22095	0.62	+1.6
4,777,427	+		DZA65_RS22095	0.62	+1.9
4,777,427	+		DZA65_RS22095	0.62	-0.2
4,777,428	-		DZA65_RS22095	0.62	+0.6
4,777,451	+		DZA65_RS22095	0.64	-0.1
4,777,451	+		DZA65_RS22095	0.64	-0.7
4,777,452	-		DZA65_RS22095	0.64	-0.9
4,777,452	-		DZA65_RS22095	0.64	+1.1
4,777,452	-		DZA65_RS22095	0.64	+0.3
4,777,476	+		DZA65_RS22095	0.66	-1.2
4,777,491	+		DZA65_RS22095	0.67	+0.0
4,777,491	+		DZA65_RS22095	0.67	-1.2
4,777,491	+		DZA65_RS22095	0.67	-1.3
4,777,492	-		DZA65_RS22095	0.67	-0.1
4,777,492	-		DZA65_RS22095	0.67	+2.1
4,777,492	-		DZA65_RS22095	0.67	-1.4
4,777,492	-		DZA65_RS22095	0.67	+0.4
4,777,492	-		DZA65_RS22095	0.67	-0.2
4,777,492	-		DZA65_RS22095	0.67	+1.5
4,777,553	+		DZA65_RS22095	0.72	+0.0
4,777,553	+		DZA65_RS22095	0.72	-1.2
4,777,553	+		DZA65_RS22095	0.72	+2.1
4,777,553	+		DZA65_RS22095	0.72	+0.3
4,777,553	+		DZA65_RS22095	0.72	-0.2
4,777,553	+		DZA65_RS22095	0.72	-0.5
4,777,553	+		DZA65_RS22095	0.72	-0.0
4,777,554	-		DZA65_RS22095	0.72	-0.9
4,777,554	-		DZA65_RS22095	0.72	-0.1
4,777,554	-		DZA65_RS22095	0.72	-0.9
4,777,554	-		DZA65_RS22095	0.72	+0.9
4,777,554	-		DZA65_RS22095	0.72	-1.1
4,777,554	-		DZA65_RS22095	0.72	+0.0
4,777,657	+		DZA65_RS22095	0.80	-1.2
4,777,657	+		DZA65_RS22095	0.80	-0.7
4,777,657	+		DZA65_RS22095	0.80	-0.7
4,777,657	+		DZA65_RS22095	0.80	+0.3
4,777,657	+		DZA65_RS22095	0.80	-0.9
4,777,657	+		DZA65_RS22095	0.80	+1.5
4,777,657	+		DZA65_RS22095	0.80	+0.3
4,777,658	-		DZA65_RS22095	0.80	-0.3
4,777,658	-		DZA65_RS22095	0.80	+1.1
4,777,658	-		DZA65_RS22095	0.80	-0.1
4,777,658	-		DZA65_RS22095	0.80	-0.4
4,777,658	-		DZA65_RS22095	0.80	+0.1
4,777,709	+		DZA65_RS22095	0.84	+0.3
4,777,709	+		DZA65_RS22095	0.84	-0.6
4,777,709	+		DZA65_RS22095	0.84	-0.1
4,777,709	+		DZA65_RS22095	0.84	-0.2
4,777,709	+		DZA65_RS22095	0.84	+0.1
4,777,709	+		DZA65_RS22095	0.84	+0.7
4,777,710	-		DZA65_RS22095	0.84	-1.4
4,777,710	-		DZA65_RS22095	0.84	-0.0
4,777,710	-		DZA65_RS22095	0.84	-0.4
4,777,710	-		DZA65_RS22095	0.84	+0.0
4,777,710	-		DZA65_RS22095	0.84	+1.7
4,777,750	+		DZA65_RS22095	0.88	+0.1
4,777,751	-		DZA65_RS22095	0.88	-0.4
4,777,907	+				+0.0
4,777,907	+				+1.5
4,777,907	+				-0.1
4,777,908	-				+2.9
4,777,908	-				-0.6
4,777,910	+				+0.7
4,777,910	+				-0.2
4,777,910	+				+1.1
4,777,910	+				+0.4
4,777,910	+				+0.3
4,777,910	+				+0.4
4,777,910	+				+0.1
4,777,910	+				+0.5
4,777,910	+				-0.1
4,777,911	-				+0.3
4,777,911	-				+1.1
4,777,911	-				+1.3
4,777,911	-				+0.5
4,777,911	-				-0.2
4,777,911	-				-1.4
4,777,911	-				+1.1
4,777,911	-				-1.2
4,777,911	-				+0.7
4,777,911	-				-0.2
4,777,911	-				-0.4
4,777,911	-				+1.6
4,777,911	-				-0.4
4,777,914	+				-0.4
4,777,914	+				+1.9
4,777,914	+				-0.4
4,777,914	+				-0.6
4,777,914	+				-0.0
4,777,915	-				-0.3
4,777,915	-				+1.6
4,777,915	-				+0.1
4,777,933	+				-0.9
4,777,933	+				+1.8
4,777,963	-				-1.9
4,778,089	+		DZA65_RS22100	0.11	-1.3
4,778,089	+		DZA65_RS22100	0.11	-0.8
4,778,090	-		DZA65_RS22100	0.11	+0.2
4,778,107	+		DZA65_RS22100	0.12	-0.3
4,778,108	-		DZA65_RS22100	0.13	+1.1
4,778,108	-		DZA65_RS22100	0.13	-0.9
4,778,108	-		DZA65_RS22100	0.13	+0.4
4,778,108	-		DZA65_RS22100	0.13	+0.4
4,778,143	-		DZA65_RS22100	0.16	+0.3
4,778,143	-		DZA65_RS22100	0.16	-0.6
4,778,143	-		DZA65_RS22100	0.16	-0.3
4,778,195	+		DZA65_RS22100	0.20	-0.4
4,778,195	+		DZA65_RS22100	0.20	+0.0
4,778,196	-		DZA65_RS22100	0.20	-1.2
4,778,196	-		DZA65_RS22100	0.20	-2.4
4,778,241	-		DZA65_RS22100	0.24	-1.7
4,778,241	-		DZA65_RS22100	0.24	+0.1
4,778,409	+		DZA65_RS22100	0.38	-1.1
4,778,409	+		DZA65_RS22100	0.38	-1.2
4,778,410	-		DZA65_RS22100	0.38	+0.7
4,778,410	-		DZA65_RS22100	0.38	+0.6
4,778,410	-		DZA65_RS22100	0.38	+0.3
4,778,410	-		DZA65_RS22100	0.38	+0.8
4,778,437	+		DZA65_RS22100	0.41	+0.4
4,778,453	+		DZA65_RS22100	0.42	+0.1
4,778,453	+		DZA65_RS22100	0.42	+0.1
4,778,453	+		DZA65_RS22100	0.42	-0.3
4,778,453	+		DZA65_RS22100	0.42	-1.5
4,778,453	+		DZA65_RS22100	0.42	-0.2
4,778,454	-		DZA65_RS22100	0.42	-0.0
4,778,454	-		DZA65_RS22100	0.42	+1.1
4,778,454	-		DZA65_RS22100	0.42	+0.3
4,778,454	-		DZA65_RS22100	0.42	-1.8
4,778,560	+		DZA65_RS22100	0.51	-1.2
4,778,560	+		DZA65_RS22100	0.51	+1.0
4,778,560	+		DZA65_RS22100	0.51	+1.1
4,778,561	-		DZA65_RS22100	0.51	-0.6
4,778,561	-		DZA65_RS22100	0.51	+0.6
4,778,561	-		DZA65_RS22100	0.51	-1.3
4,779,030	+				-0.3
4,779,030	+				+1.1
4,779,030	+				+0.1
4,779,030	+				-0.9
4,779,030	+				-0.4
4,779,030	+				+0.9
4,779,030	+				+1.9
4,779,030	+				-0.1
4,779,031	-				+0.1
4,779,031	-				+0.4
4,779,031	-				-0.2
4,779,033	+				-0.6
4,779,033	+				+2.1
4,779,033	+				-1.7
4,779,033	+				+0.1
4,779,033	+				-1.7
4,779,033	+				+2.1
4,779,033	+				+0.6
4,779,033	+				+0.3
4,779,033	+				+1.1
4,779,033	+				+0.6
4,779,033	+				-1.7
4,779,033	+				+0.0
4,779,033	+				-1.2
4,779,034	-				-0.2
4,779,034	-				-1.7
4,779,034	-				+0.6
4,779,034	-				-0.4
4,779,034	-				+0.1
4,779,034	-				-0.9
4,779,034	-				-0.9
4,779,034	-				+1.1
4,779,034	-				+0.1
4,779,034	-				-1.0
4,779,034	-				-0.5
4,779,034	-				+0.0
4,779,037	+				+0.8
4,779,037	+				-0.3
4,779,037	+				-0.2
4,779,038	-				-0.9
4,779,099	-				+1.0
4,779,119	+				-1.0
4,779,119	+				+0.1
4,779,119	+				-0.9
4,779,119	+				+0.1
4,779,119	+				-0.2
4,779,119	+				+2.0
4,779,119	+				-1.3
4,779,119	+				+1.6
4,779,119	+				-0.4
4,779,119	+				+0.5
4,779,119	+				+0.9
4,779,119	+				-0.3
4,779,119	+				-0.1
4,779,119	+				+1.3
4,779,119	+				-0.4
4,779,119	+				-2.0
4,779,119	+				-1.8
4,779,119	+				+1.1
4,779,119	+				+0.1
4,779,119	+				+2.0
4,779,119	+				-0.9
4,779,119	+				+1.1
4,779,119	+				-2.0
4,779,120	-				-0.3
4,779,120	-				+0.3
4,779,120	-				+1.2
4,779,120	-				-1.4
4,779,120	-				+1.1
4,779,120	-				-0.3
4,779,120	-				-0.1
4,779,120	-				-0.2
4,779,120	-				+2.4
4,779,120	-				-0.4
4,779,120	-				-0.9
4,779,173	+				-0.3
4,779,173	+				-0.7
4,779,173	+				+0.1
4,779,173	+				-0.4
4,779,173	+				+0.8
4,779,174	-				-0.4
4,779,174	-				-0.3
4,779,174	-				+2.1
4,779,174	-				+0.1
4,779,174	-				+0.1
4,779,174	-				-1.2
4,779,174	-				+0.1
4,779,174	-				+0.1
4,779,174	-				+0.5
4,779,213	+				-2.4
4,779,213	+				-0.4
4,779,213	+				-0.5
4,779,216	+				-0.6
4,779,216	+				+1.0
4,779,216	+				+1.1
4,779,216	+				-0.3
4,779,216	+				-1.0
4,779,216	+				-0.4
4,779,216	+				-2.0
4,779,216	+				-1.1
4,779,217	-				-1.7
4,779,217	-				+1.1
4,779,217	-				+0.1
4,779,217	-				-2.9
4,779,217	-				+1.6
4,779,217	-				+0.1
4,779,217	-				+1.5
4,779,217	-				-2.2
4,779,217	-				+1.6
4,779,220	+				-0.3
4,779,221	-				-0.9
4,779,221	-				-0.3
4,779,221	-				-0.2
4,779,221	-				+2.9
4,779,221	-				-0.9
4,779,235	+				+0.4
4,779,261	+				-0.6
4,779,262	-				-0.5
4,779,262	-				-1.0
4,779,262	-				-0.3
4,779,288	+				-1.2
4,779,566	+		DZA65_RS22105	0.35	-0.3
4,779,566	+		DZA65_RS22105	0.35	-0.1
4,779,567	-		DZA65_RS22105	0.36	-0.4
4,779,567	-		DZA65_RS22105	0.36	-1.2
4,779,567	-		DZA65_RS22105	0.36	+0.2
4,779,567	-		DZA65_RS22105	0.36	+0.5
4,779,629	+		DZA65_RS22105	0.43	-0.2
4,779,629	+		DZA65_RS22105	0.43	-0.4
4,779,629	+		DZA65_RS22105	0.43	-1.0
4,779,630	-		DZA65_RS22105	0.43	-0.1
4,779,667	+		DZA65_RS22105	0.47	+1.9
4,779,668	-		DZA65_RS22105	0.47	-1.7
4,779,668	-		DZA65_RS22105	0.47	-1.7
4,779,668	-		DZA65_RS22105	0.47	-0.6
4,779,798	+		DZA65_RS22105	0.62	-0.9
4,779,798	+		DZA65_RS22105	0.62	+0.0
4,779,798	+		DZA65_RS22105	0.62	+0.7
4,779,798	+		DZA65_RS22105	0.62	+0.9
4,779,798	+		DZA65_RS22105	0.62	-0.3
4,779,798	+		DZA65_RS22105	0.62	+0.2
4,779,798	+		DZA65_RS22105	0.62	+0.3
4,779,798	+		DZA65_RS22105	0.62	-0.4
4,779,798	+		DZA65_RS22105	0.62	+0.0
4,779,799	-		DZA65_RS22105	0.62	+0.1
4,779,799	-		DZA65_RS22105	0.62	+3.0
4,779,799	-		DZA65_RS22105	0.62	+0.8
4,779,799	-		DZA65_RS22105	0.62	+0.4
4,779,799	-		DZA65_RS22105	0.62	+2.7
4,779,799	-		DZA65_RS22105	0.62	+0.1
4,779,799	-		DZA65_RS22105	0.62	+0.6
4,779,799	-		DZA65_RS22105	0.62	+1.3
4,779,799	-		DZA65_RS22105	0.62	-0.4
4,779,799	-		DZA65_RS22105	0.62	+0.5
4,779,799	-		DZA65_RS22105	0.62	-0.9
4,779,799	-		DZA65_RS22105	0.62	+2.8
4,779,799	-		DZA65_RS22105	0.62	+0.1
4,779,863	+		DZA65_RS22105	0.69	+0.7
4,779,863	+				+0.1
4,779,863	+		DZA65_RS22105	0.69	+0.8
4,779,863	+		DZA65_RS22105	0.69	+0.5
4,779,863	+		DZA65_RS22105	0.69	-0.4
4,779,864	-		DZA65_RS22105	0.69	+0.5
4,779,944	+		DZA65_RS22105	0.78	-1.2
4,780,044	+		DZA65_RS22105	0.89	+0.7
4,780,100	+				-0.8
4,780,101	-				-0.9
4,780,101	-				-1.2
4,780,110	+				-0.1
4,780,111	-				-0.6
4,780,111	-				-0.4
4,780,111	-				-0.2