Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22045

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,765,349	+				-2.0
4,765,349	+				-0.5
4,765,349	+				-0.7
4,765,349	+				+0.1
4,765,349	+				+0.1
4,765,350	-				-0.2
4,765,350	-				-0.9
4,765,350	-				+0.3
4,765,350	-				-0.7
4,765,371	+				-0.9
4,765,372	-				-1.2
4,765,372	-				+1.0
4,765,373	+				-1.2
4,765,373	+				-0.4
4,765,373	+				+0.5
4,765,373	+				+0.7
4,765,373	+				-1.6
4,765,373	+				-0.3
4,765,373	+				-1.2
4,765,373	+				+0.4
4,765,373	+				-1.7
4,765,373	+				+0.6
4,765,373	+				-1.2
4,765,373	+				-0.6
4,765,373	+				-0.9
4,765,373	+				-0.7
4,765,373	+				-0.4
4,765,373	+				-2.0
4,765,373	+				-1.2
4,765,373	+				-1.4
4,765,373	+				-2.0
4,765,373	+				+0.1
4,765,373	+				+1.7
4,765,373	+				-0.9
4,765,373	+				-0.4
4,765,374	-				-0.3
4,765,374	-				-1.6
4,765,374	-				+1.5
4,765,374	-				+0.1
4,765,374	-				+0.6
4,765,374	-				+0.1
4,765,374	-				-0.9
4,765,374	-				+3.0
4,765,374	-				-1.9
4,765,374	-				+0.6
4,765,374	-				+2.5
4,765,374	-				-0.2
4,765,374	-				-2.2
4,765,374	-				+0.6
4,765,374	-				-0.7
4,765,374	-				-0.8
4,765,443	-		DZA65_RS22040	0.14	+0.1
4,765,443	-		DZA65_RS22040	0.14	-0.4
4,765,496	+		DZA65_RS22040	0.19	+0.1
4,765,497	-		DZA65_RS22040	0.19	-0.9
4,765,497	-		DZA65_RS22040	0.19	+0.9
4,765,539	+		DZA65_RS22040	0.23	-1.7
4,765,686	+		DZA65_RS22040	0.37	+0.7
4,765,686	+		DZA65_RS22040	0.37	+0.9
4,765,686	+		DZA65_RS22040	0.37	+0.4
4,765,686	+		DZA65_RS22040	0.37	+1.1
4,765,686	+		DZA65_RS22040	0.37	+1.7
4,765,686	+		DZA65_RS22040	0.37	+0.1
4,765,686	+		DZA65_RS22040	0.37	+0.1
4,765,686	+		DZA65_RS22040	0.37	-2.4
4,765,686	+		DZA65_RS22040	0.37	-0.8
4,765,686	+		DZA65_RS22040	0.37	+2.7
4,765,687	-		DZA65_RS22040	0.38	+1.6
4,765,687	-		DZA65_RS22040	0.38	+1.7
4,765,687	-		DZA65_RS22040	0.38	-1.2
4,765,687	-		DZA65_RS22040	0.38	+0.6
4,765,687	-		DZA65_RS22040	0.38	+2.0
4,765,687	-		DZA65_RS22040	0.38	-0.3
4,765,736	+		DZA65_RS22040	0.42	-0.7
4,765,737	-		DZA65_RS22040	0.42	-0.4
4,765,747	-		DZA65_RS22040	0.43	-1.9
4,765,848	-		DZA65_RS22040	0.53	-0.9
4,765,911	+		DZA65_RS22040	0.59	-0.6
4,765,912	-		DZA65_RS22040	0.59	-1.3
4,765,912	-		DZA65_RS22040	0.59	-0.2
4,765,951	+		DZA65_RS22040	0.63	-0.1
4,765,951	+		DZA65_RS22040	0.63	+0.3
4,765,952	-		DZA65_RS22040	0.63	-0.8
4,765,952	-		DZA65_RS22040	0.63	+0.9
4,765,952	-		DZA65_RS22040	0.63	+2.1
4,765,952	-		DZA65_RS22040	0.63	-1.0
4,765,991	+		DZA65_RS22040	0.67	-0.9
4,765,991	+		DZA65_RS22040	0.67	+0.1
4,765,992	-		DZA65_RS22040	0.67	-1.7
4,766,123	+		DZA65_RS22040	0.79	-0.3
4,766,165	+		DZA65_RS22040	0.83	+1.4
4,766,166	-		DZA65_RS22040	0.83	+0.5
4,766,216	+		DZA65_RS22040	0.88	+1.0
4,766,216	+		DZA65_RS22040	0.88	-0.9
4,766,216	+		DZA65_RS22040	0.88	-1.9
4,766,216	+		DZA65_RS22040	0.88	-0.1
4,766,216	+		DZA65_RS22040	0.88	-0.2
4,766,216	+		DZA65_RS22040	0.88	-0.3
4,766,217	-		DZA65_RS22040	0.88	+0.1
4,766,217	-		DZA65_RS22040	0.88	+1.4
4,766,217	-				+2.1
4,766,217	-		DZA65_RS22040	0.88	+1.6
4,766,217	-		DZA65_RS22040	0.88	-1.2
4,766,217	-		DZA65_RS22040	0.88	-1.4
4,766,217	-		DZA65_RS22040	0.88	+0.3
4,766,456	-		DZA65_RS22045	0.13	+0.8
4,766,461	+		DZA65_RS22045	0.14	+1.0
4,766,494	+		DZA65_RS22045	0.17	+3.6
4,766,494	+		DZA65_RS22045	0.17	+0.7
4,766,494	+		DZA65_RS22045	0.17	-1.2
4,766,494	+		DZA65_RS22045	0.17	-1.9
4,766,495	-		DZA65_RS22045	0.17	-0.6
4,766,495	-		DZA65_RS22045	0.17	-0.9
4,766,503	+		DZA65_RS22045	0.18	-0.7
4,766,503	+		DZA65_RS22045	0.18	+0.6
4,766,503	+		DZA65_RS22045	0.18	+1.6
4,766,503	+		DZA65_RS22045	0.18	-0.0
4,766,503	+		DZA65_RS22045	0.18	+0.1
4,766,503	+		DZA65_RS22045	0.18	+1.0
4,766,503	+		DZA65_RS22045	0.18	+0.5
4,766,504	-		DZA65_RS22045	0.18	-0.9
4,766,504	-		DZA65_RS22045	0.18	+1.0
4,766,504	-		DZA65_RS22045	0.18	-0.8
4,766,504	-		DZA65_RS22045	0.18	+0.3
4,766,504	-		DZA65_RS22045	0.18	+0.3
4,766,504	-		DZA65_RS22045	0.18	+0.6
4,766,504	-		DZA65_RS22045	0.18	+0.4
4,766,504	-		DZA65_RS22045	0.18	-0.2
4,766,518	+		DZA65_RS22045	0.20	+0.9
4,766,518	+		DZA65_RS22045	0.20	+1.1
4,766,518	+		DZA65_RS22045	0.20	-0.8
4,766,519	-		DZA65_RS22045	0.20	+0.7
4,766,519	-		DZA65_RS22045	0.20	+0.8
4,766,519	-		DZA65_RS22045	0.20	-0.2
4,766,551	+		DZA65_RS22045	0.23	-0.7
4,766,551	+		DZA65_RS22045	0.23	+0.1
4,766,551	+		DZA65_RS22045	0.23	-0.9
4,766,551	+		DZA65_RS22045	0.23	+0.1
4,766,551	+		DZA65_RS22045	0.23	+0.1
4,766,551	+		DZA65_RS22045	0.23	-1.7
4,766,551	+		DZA65_RS22045	0.23	-0.8
4,766,551	+		DZA65_RS22045	0.23	+0.7
4,766,552	-		DZA65_RS22045	0.23	-0.2
4,766,552	-		DZA65_RS22045	0.23	+0.8
4,766,552	-		DZA65_RS22045	0.23	+0.5
4,766,552	-		DZA65_RS22045	0.23	-0.8
4,766,552	-		DZA65_RS22045	0.23	+1.1
4,766,552	-		DZA65_RS22045	0.23	-0.5
4,766,552	-		DZA65_RS22045	0.23	+2.1
4,766,552	-		DZA65_RS22045	0.23	-0.5
4,766,552	-		DZA65_RS22045	0.23	+0.3
4,766,552	-		DZA65_RS22045	0.23	-0.7
4,766,557	+		DZA65_RS22045	0.24	+0.4
4,766,557	+		DZA65_RS22045	0.24	-0.6
4,766,557	+		DZA65_RS22045	0.24	+0.2
4,766,557	+		DZA65_RS22045	0.24	+2.6
4,766,557	+		DZA65_RS22045	0.24	-1.2
4,766,557	+		DZA65_RS22045	0.24	+0.2
4,766,558	-		DZA65_RS22045	0.24	+1.1
4,766,558	-		DZA65_RS22045	0.24	-1.1
4,766,558	-		DZA65_RS22045	0.24	-2.7
4,766,558	-		DZA65_RS22045	0.24	-0.1
4,766,558	-		DZA65_RS22045	0.24	-0.7
4,766,584	+		DZA65_RS22045	0.27	+0.6
4,766,584	+		DZA65_RS22045	0.27	-0.2
4,766,585	-		DZA65_RS22045	0.27	-0.4
4,766,585	-		DZA65_RS22045	0.27	+0.1
4,766,614	-		DZA65_RS22045	0.30	+0.2
4,766,614	-		DZA65_RS22045	0.30	+1.1
4,766,769	+		DZA65_RS22045	0.47	+1.7
4,766,770	-		DZA65_RS22045	0.47	+0.8
4,766,770	-		DZA65_RS22045	0.47	+0.1
4,766,770	-		DZA65_RS22045	0.47	-1.2
4,766,795	+		DZA65_RS22045	0.50	+0.1
4,766,795	+		DZA65_RS22045	0.50	-0.9
4,766,884	+		DZA65_RS22045	0.60	+0.8
4,766,885	-		DZA65_RS22045	0.60	-0.3
4,766,885	-		DZA65_RS22045	0.60	-1.2
4,767,011	+		DZA65_RS22045	0.73	-0.3
4,767,022	+		DZA65_RS22045	0.75	+1.1
4,767,022	+		DZA65_RS22045	0.75	+1.1
4,767,022	+		DZA65_RS22045	0.75	-1.7
4,767,022	+		DZA65_RS22045	0.75	+1.5
4,767,022	+		DZA65_RS22045	0.75	-0.4
4,767,022	+		DZA65_RS22045	0.75	+2.1
4,767,022	+		DZA65_RS22045	0.75	-1.9
4,767,022	+		DZA65_RS22045	0.75	+0.4
4,767,022	+		DZA65_RS22045	0.75	-0.4
4,767,023	-		DZA65_RS22045	0.75	+0.0
4,767,023	-		DZA65_RS22045	0.75	+0.4
4,767,023	-		DZA65_RS22045	0.75	-1.1
4,767,023	-		DZA65_RS22045	0.75	-0.5
4,767,023	-		DZA65_RS22045	0.75	-0.2
4,767,023	-		DZA65_RS22045	0.75	+0.4
4,767,023	-		DZA65_RS22045	0.75	+1.3
4,767,105	+				+0.6
4,767,105	+		DZA65_RS22045	0.84	-0.4
4,767,105	+		DZA65_RS22045	0.84	-1.2
4,767,105	+		DZA65_RS22045	0.84	+0.9
4,767,105	+		DZA65_RS22045	0.84	-0.3
4,767,105	+		DZA65_RS22045	0.84	-1.7
4,767,105	+		DZA65_RS22045	0.84	-0.9
4,767,106	-		DZA65_RS22045	0.84	-0.0
4,767,106	-		DZA65_RS22045	0.84	+0.7
4,767,106	-		DZA65_RS22045	0.84	-1.0
4,767,106	-		DZA65_RS22045	0.84	+0.8
4,767,106	-		DZA65_RS22045	0.84	+0.2
4,767,106	-		DZA65_RS22045	0.84	+3.4
4,767,106	-		DZA65_RS22045	0.84	-1.2
4,767,254	+				+0.8
4,767,254	+				+0.8
4,767,255	-				+0.5
4,767,255	-				-0.4
4,767,499	+				-0.9
4,767,499	+				+0.6
4,767,499	+				-0.5
4,767,499	+				+0.7
4,767,500	-				-1.7
4,767,500	-				+0.4
4,767,501	+				+0.7
4,767,501	+				-0.4
4,767,502	-				+2.3
4,767,502	-				-0.8
4,767,585	+		DZA65_RS22050	0.16	+1.1
4,767,585	+		DZA65_RS22050	0.16	+0.6
4,767,585	+		DZA65_RS22050	0.16	+0.0
4,767,609	+		DZA65_RS22050	0.18	+1.1
4,767,609	+		DZA65_RS22050	0.18	+0.4
4,767,609	+		DZA65_RS22050	0.18	-1.2
4,767,610	-				-0.9
4,767,610	-		DZA65_RS22050	0.18	-1.7
4,767,610	-		DZA65_RS22050	0.18	+0.8
4,767,610	-		DZA65_RS22050	0.18	-0.2
4,767,628	-		DZA65_RS22050	0.19	-0.8
4,767,628	-		DZA65_RS22050	0.19	-0.0
4,767,654	+		DZA65_RS22050	0.21	-1.2
4,767,655	-		DZA65_RS22050	0.21	+1.9
4,767,655	-		DZA65_RS22050	0.21	-0.7
4,767,657	+		DZA65_RS22050	0.21	-2.2
4,767,657	+		DZA65_RS22050	0.21	-0.9
4,767,657	+		DZA65_RS22050	0.21	-0.0
4,767,702	+		DZA65_RS22050	0.24	-0.2
4,767,702	+		DZA65_RS22050	0.24	+2.1
4,767,702	+		DZA65_RS22050	0.24	+0.2
4,767,702	+		DZA65_RS22050	0.24	-0.3
4,767,703	-		DZA65_RS22050	0.24	-0.6
4,767,703	-		DZA65_RS22050	0.24	+0.1
4,767,807	+		DZA65_RS22050	0.32	+0.6
4,767,807	+		DZA65_RS22050	0.32	+1.6
4,767,807	+		DZA65_RS22050	0.32	+0.4
4,767,808	-		DZA65_RS22050	0.32	+0.6
4,767,808	-		DZA65_RS22050	0.32	+3.7
4,767,808	-		DZA65_RS22050	0.32	-0.8
4,767,844	+		DZA65_RS22050	0.35	-1.2
4,767,976	+		DZA65_RS22050	0.44	-0.4
4,767,976	+		DZA65_RS22050	0.44	-0.2
4,767,976	+		DZA65_RS22050	0.44	+1.1
4,767,977	-		DZA65_RS22050	0.44	-0.0
4,767,977	-		DZA65_RS22050	0.44	-0.7
4,767,984	+		DZA65_RS22050	0.45	+0.1
4,767,984	+		DZA65_RS22050	0.45	+2.1
4,768,083	+		DZA65_RS22050	0.52	+0.3
4,768,083	+		DZA65_RS22050	0.52	-0.5
4,768,084	-		DZA65_RS22050	0.52	-0.2
4,768,139	+		DZA65_RS22050	0.56	-0.1
4,768,139	+		DZA65_RS22050	0.56	-0.6
4,768,139	+		DZA65_RS22050	0.56	-1.2
4,768,139	+		DZA65_RS22050	0.56	-1.4
4,768,139	+		DZA65_RS22050	0.56	+0.8
4,768,139	+		DZA65_RS22050	0.56	-1.7
4,768,139	+		DZA65_RS22050	0.56	-0.8
4,768,139	+		DZA65_RS22050	0.56	-0.2
4,768,140	-		DZA65_RS22050	0.56	+1.5
4,768,140	-		DZA65_RS22050	0.56	-1.1