Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20050

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,339,378	-		DZA65_RS20045	0.40	-1.0
4,339,430	-		DZA65_RS20045	0.44	-0.5
4,339,445	+		DZA65_RS20045	0.45	-0.1
4,339,445	+		DZA65_RS20045	0.45	+0.7
4,339,445	+		DZA65_RS20045	0.45	-0.1
4,339,445	+		DZA65_RS20045	0.45	-1.6
4,339,446	-		DZA65_RS20045	0.45	+1.4
4,339,446	-		DZA65_RS20045	0.45	-0.1
4,339,489	+		DZA65_RS20045	0.48	-0.7
4,339,489	+		DZA65_RS20045	0.48	+0.3
4,339,489	+		DZA65_RS20045	0.48	+0.2
4,339,489	+		DZA65_RS20045	0.48	+1.0
4,339,489	+		DZA65_RS20045	0.48	+0.0
4,339,489	+		DZA65_RS20045	0.48	+0.2
4,339,490	-		DZA65_RS20045	0.48	-0.6
4,339,490	-		DZA65_RS20045	0.48	-2.0
4,339,490	-		DZA65_RS20045	0.48	-1.6
4,339,490	-		DZA65_RS20045	0.48	+0.3
4,339,490	-		DZA65_RS20045	0.48	-0.3
4,339,490	-		DZA65_RS20045	0.48	-1.3
4,339,734	+		DZA65_RS20045	0.64	+0.1
4,339,745	+		DZA65_RS20045	0.65	+0.0
4,339,745	+		DZA65_RS20045	0.65	+1.2
4,339,745	+		DZA65_RS20045	0.65	-0.2
4,339,745	+		DZA65_RS20045	0.65	+1.4
4,339,745	+		DZA65_RS20045	0.65	-0.1
4,339,745	+		DZA65_RS20045	0.65	+0.0
4,339,745	+		DZA65_RS20045	0.65	+0.5
4,339,745	+		DZA65_RS20045	0.65	+0.5
4,339,745	+		DZA65_RS20045	0.65	-0.4
4,339,746	-		DZA65_RS20045	0.65	+0.3
4,339,746	-		DZA65_RS20045	0.65	+1.4
4,339,746	-		DZA65_RS20045	0.65	+0.3
4,339,746	-		DZA65_RS20045	0.65	+0.3
4,339,746	-		DZA65_RS20045	0.65	+0.0
4,339,746	-		DZA65_RS20045	0.65	+0.7
4,339,746	-		DZA65_RS20045	0.65	+0.7
4,339,746	-		DZA65_RS20045	0.65	-0.4
4,339,746	-		DZA65_RS20045	0.65	-0.2
4,339,746	-		DZA65_RS20045	0.65	+0.1
4,339,746	-		DZA65_RS20045	0.65	+0.1
4,339,746	-		DZA65_RS20045	0.65	+0.1
4,339,746	-		DZA65_RS20045	0.65	+0.1
4,339,830	+		DZA65_RS20045	0.70	-0.2
4,339,830	+		DZA65_RS20045	0.70	-0.0
4,339,830	+		DZA65_RS20045	0.70	-0.6
4,339,830	+		DZA65_RS20045	0.70	+2.3
4,339,830	+		DZA65_RS20045	0.70	-0.5
4,339,831	-		DZA65_RS20045	0.70	-0.9
4,339,831	-		DZA65_RS20045	0.70	-0.4
4,339,831	-		DZA65_RS20045	0.70	-0.5
4,339,831	-		DZA65_RS20045	0.70	+0.3
4,339,831	-		DZA65_RS20045	0.70	-1.8
4,339,831	-				+0.4
4,339,936	+		DZA65_RS20045	0.77	+0.2
4,339,936	+		DZA65_RS20045	0.77	+2.6
4,339,977	+		DZA65_RS20045	0.80	-1.8
4,339,978	-		DZA65_RS20045	0.80	+1.4
4,339,978	-		DZA65_RS20045	0.80	+0.3
4,339,978	-		DZA65_RS20045	0.80	-1.2
4,339,978	-		DZA65_RS20045	0.80	+2.0
4,339,978	-		DZA65_RS20045	0.80	-0.4
4,340,014	-		DZA65_RS20045	0.82	-1.3
4,340,062	+		DZA65_RS20045	0.86	-0.1
4,340,062	+		DZA65_RS20045	0.86	-0.7
4,340,063	-		DZA65_RS20045	0.86	+0.4
4,340,080	+		DZA65_RS20045	0.87	-2.0
4,340,081	-		DZA65_RS20045	0.87	-0.2
4,340,082	+		DZA65_RS20045	0.87	-0.6
4,340,082	+		DZA65_RS20045	0.87	+0.5
4,340,082	+		DZA65_RS20045	0.87	-0.1
4,340,082	+		DZA65_RS20045	0.87	+0.0
4,340,082	+		DZA65_RS20045	0.87	+0.4
4,340,082	+		DZA65_RS20045	0.87	+1.1
4,340,082	+		DZA65_RS20045	0.87	-0.3
4,340,082	+		DZA65_RS20045	0.87	+0.0
4,340,082	+		DZA65_RS20045	0.87	-0.1
4,340,082	+		DZA65_RS20045	0.87	+0.0
4,340,083	-		DZA65_RS20045	0.87	-1.3
4,340,083	-		DZA65_RS20045	0.87	-1.4
4,340,083	-		DZA65_RS20045	0.87	-0.4
4,340,083	-		DZA65_RS20045	0.87	+1.0
4,340,083	-		DZA65_RS20045	0.87	+0.0
4,340,083	-		DZA65_RS20045	0.87	+1.3
4,340,083	-		DZA65_RS20045	0.87	+1.3
4,340,083	-		DZA65_RS20045	0.87	-1.3
4,340,083	-		DZA65_RS20045	0.87	+0.1
4,340,109	+		DZA65_RS20045	0.89	-0.6
4,340,110	-		DZA65_RS20045	0.89	+0.0
4,340,110	-		DZA65_RS20045	0.89	+0.9
4,340,110	-		DZA65_RS20045	0.89	-1.3
4,340,110	-		DZA65_RS20045	0.89	-0.6
4,340,110	-		DZA65_RS20045	0.89	-1.6
4,340,110	-		DZA65_RS20045	0.89	-0.3
4,340,110	-		DZA65_RS20045	0.89	-1.8
4,340,116	+		DZA65_RS20045	0.89	+1.0
4,340,173	+				-0.7
4,340,173	+				+0.4
4,340,303	+				-1.1
4,340,303	+				+0.4
4,340,303	+				+1.5
4,340,303	+				-2.4
4,340,303	+				+0.1
4,340,303	+				+1.0
4,340,303	+				+0.7
4,340,303	+				+1.7
4,340,303	+				-1.0
4,340,304	-				+2.0
4,340,304	-				-1.6
4,340,304	-				+0.7
4,340,304	-				-0.5
4,340,304	-				+0.4
4,340,304	-				-1.2
4,340,304	-				+1.6
4,340,311	+				-0.6
4,340,311	+				+1.9
4,340,311	+				+0.6
4,340,311	+				-0.1
4,340,312	-				+0.7
4,340,312	-				-0.1
4,340,312	-				+3.6
4,340,312	-				+0.8
4,340,312	-				-0.1
4,340,350	+				+0.5
4,340,350	+				-0.2
4,340,351	-				-0.8
4,340,351	-				+0.6
4,340,351	-				-1.0
4,340,351	-				-2.8
4,340,351	-				+0.0
4,340,354	-				+0.2
4,340,366	+				+0.0
4,340,366	+				+0.3
4,340,366	+				-1.8
4,340,366	+				-0.6
4,340,367	-				-1.4
4,340,367	-				+1.0
4,340,367	-				-1.2
4,340,367	-				+0.4
4,340,367	-				-0.6
4,340,367	-				+0.4
4,340,369	+				-0.3
4,340,457	+				+1.0
4,340,457	+				+0.7
4,340,457	+				+0.9
4,340,457	+				+0.3
4,340,457	+				-0.4
4,340,458	-				+0.1
4,340,458	-				-0.6
4,340,458	-				+1.2
4,340,458	-				+1.5
4,340,458	-				+0.5
4,340,458	-				-0.8
4,340,458	-				+0.8
4,340,464	+				+0.0
4,340,464	+				-1.0
4,340,464	+				-0.2
4,340,464	+				-0.7
4,340,465	-				-1.0
4,340,465	-				-0.5
4,340,465	-				+0.8
4,340,465	-				+1.0
4,340,465	-				+1.4
4,340,465	-				+0.4
4,340,465	-				-1.1
4,340,465	-				+1.0
4,340,465	-				+0.0
4,340,465	-				+1.2
4,340,465	-				+1.0
4,340,465	-				-1.6
4,340,465	-				-1.0
4,340,465	-				+0.0
4,340,521	+				+0.4
4,340,522	-				+0.0
4,340,547	+				-0.4
4,340,565	+				+1.4
4,340,610	+				+0.2
4,340,743	+				-0.2
4,340,764	-				-1.0
4,340,778	+				-1.0
4,340,778	+				+0.4
4,340,778	+				+2.4
4,340,778	+				-0.6
4,340,778	+				+0.7
4,340,778	+				-0.6
4,340,778	+				-0.6
4,340,778	+				+1.2
4,340,778	+				+0.4
4,340,779	-				+0.7
4,340,779	-				+0.9
4,340,779	-				+1.0
4,340,779	-				+0.0
4,340,779	-				+1.4
4,340,779	-				+0.3
4,340,779	-				-0.6
4,340,779	-				+0.4
4,340,779	-				+0.3
4,340,779	-				-0.6
4,340,779	-				-2.0
4,340,779	-				+0.7
4,340,799	+				+0.2
4,340,799	+				-1.1
4,340,800	-				-0.6
4,340,991	+		DZA65_RS20050	0.11	-0.7
4,340,991	+		DZA65_RS20050	0.11	-2.8
4,340,991	+		DZA65_RS20050	0.11	+0.7
4,340,991	+		DZA65_RS20050	0.11	-0.8
4,340,992	-		DZA65_RS20050	0.11	-1.0
4,340,992	-		DZA65_RS20050	0.11	+0.0
4,340,992	-		DZA65_RS20050	0.11	+0.0
4,340,992	-		DZA65_RS20050	0.11	-1.3
4,341,009	+		DZA65_RS20050	0.11	+0.4
4,341,009	+		DZA65_RS20050	0.11	+0.8
4,341,009	+		DZA65_RS20050	0.11	-1.3
4,341,009	+		DZA65_RS20050	0.11	+1.0
4,341,009	+				+1.4
4,341,010	-		DZA65_RS20050	0.11	+0.8
4,341,258	+		DZA65_RS20050	0.15	+0.5
4,341,540	+		DZA65_RS20050	0.20	+1.4
4,341,561	+		DZA65_RS20050	0.21	+1.7
4,341,630	+		DZA65_RS20050	0.22	+0.4
4,341,630	+		DZA65_RS20050	0.22	-0.9
4,341,630	+		DZA65_RS20050	0.22	+0.4
4,341,631	-		DZA65_RS20050	0.22	-0.0
4,341,631	-		DZA65_RS20050	0.22	-0.8
4,341,631	-		DZA65_RS20050	0.22	+0.0
4,341,631	-		DZA65_RS20050	0.22	-0.5
4,341,631	-		DZA65_RS20050	0.22	+1.0
4,341,631	-		DZA65_RS20050	0.22	+0.2
4,341,631	-		DZA65_RS20050	0.22	+0.4
4,341,631	-		DZA65_RS20050	0.22	-0.4
4,341,631	-		DZA65_RS20050	0.22	-0.3
4,341,703	-		DZA65_RS20050	0.23	-1.3
4,341,835	+		DZA65_RS20050	0.25	-2.4
4,341,835	+		DZA65_RS20050	0.25	-1.6
4,341,835	+		DZA65_RS20050	0.25	+0.1
4,341,835	+		DZA65_RS20050	0.25	+0.0
4,341,835	+		DZA65_RS20050	0.25	+1.8
4,341,835	+		DZA65_RS20050	0.25	+1.0
4,341,835	+		DZA65_RS20050	0.25	-0.2
4,341,835	+		DZA65_RS20050	0.25	-0.2
4,341,835	+		DZA65_RS20050	0.25	-0.1
4,341,836	-		DZA65_RS20050	0.25	+0.4
4,341,836	-		DZA65_RS20050	0.25	+0.7
4,341,836	-		DZA65_RS20050	0.25	+0.5
4,341,836	-		DZA65_RS20050	0.25	-0.6
4,341,836	-		DZA65_RS20050	0.25	-0.7
4,341,836	-		DZA65_RS20050	0.25	+0.7
4,341,836	-		DZA65_RS20050	0.25	-1.4
4,341,870	+		DZA65_RS20050	0.26	-0.4
4,341,870	+		DZA65_RS20050	0.26	-1.4
4,341,870	+		DZA65_RS20050	0.26	+0.2
4,341,870	+		DZA65_RS20050	0.26	-0.7
4,342,109	+		DZA65_RS20050	0.30	+0.0
4,342,109	+		DZA65_RS20050	0.30	+1.9
4,342,109	+		DZA65_RS20050	0.30	-1.9
4,342,109	+		DZA65_RS20050	0.30	-0.2
4,342,109	+		DZA65_RS20050	0.30	-0.9
4,342,109	+		DZA65_RS20050	0.30	+0.2
4,342,109	+		DZA65_RS20050	0.30	-1.6
4,342,110	-		DZA65_RS20050	0.30	-1.3
4,342,110	-		DZA65_RS20050	0.30	-0.4
4,342,110	-		DZA65_RS20050	0.30	-0.8
4,342,110	-		DZA65_RS20050	0.30	+0.2
4,342,110	-		DZA65_RS20050	0.30	+0.4
4,342,110	-		DZA65_RS20050	0.30	+0.2
4,342,157	-		DZA65_RS20050	0.31	-1.3
4,342,199	+		DZA65_RS20050	0.32	+1.0
4,342,199	+		DZA65_RS20050	0.32	+0.3
4,342,200	-		DZA65_RS20050	0.32	+0.7
4,342,230	+		DZA65_RS20050	0.32	+1.0
4,342,271	+		DZA65_RS20050	0.33	-0.6
4,342,302	+		DZA65_RS20050	0.33	+0.3
4,342,302	+		DZA65_RS20050	0.33	-2.5
4,342,302	+		DZA65_RS20050	0.33	+1.0
4,342,303	-		DZA65_RS20050	0.33	-0.2
4,342,368	+		DZA65_RS20050	0.35	+0.6
4,342,368	+		DZA65_RS20050	0.35	+1.2
4,342,369	-		DZA65_RS20050	0.35	+0.7
4,342,369	-		DZA65_RS20050	0.35	+0.3
4,342,369	-		DZA65_RS20050	0.35	-2.2
4,342,369	-		DZA65_RS20050	0.35	-0.7
4,342,369	-		DZA65_RS20050	0.35	-2.3
4,342,440	-		DZA65_RS20050	0.36	+0.5
4,342,440	-		DZA65_RS20050	0.36	+1.0
4,342,812	-		DZA65_RS20050	0.42	-1.4
4,343,100	+		DZA65_RS20050	0.47	-0.5
4,343,133	+		DZA65_RS20050	0.48	-1.4
4,343,134	-		DZA65_RS20050	0.48	-1.9
4,343,237	+		DZA65_RS20050	0.50	-0.6
4,343,237	+		DZA65_RS20050	0.50	-1.7
4,343,237	+		DZA65_RS20050	0.50	+0.3
4,343,237	+		DZA65_RS20050	0.50	-0.2
4,343,237	+		DZA65_RS20050	0.50	-0.2
4,343,237	+		DZA65_RS20050	0.50	-1.4
4,343,237	+		DZA65_RS20050	0.50	-0.8
4,343,237	+		DZA65_RS20050	0.50	-0.3
4,343,238	-		DZA65_RS20050	0.50	-0.1
4,343,238	-		DZA65_RS20050	0.50	-0.6
4,343,238	-		DZA65_RS20050	0.50	-1.3
4,343,238	-		DZA65_RS20050	0.50	+2.0
4,343,238	-		DZA65_RS20050	0.50	-1.1
4,343,238	-		DZA65_RS20050	0.50	-0.3
4,343,286	+		DZA65_RS20050	0.50	-0.6
4,343,286	+		DZA65_RS20050	0.50	-0.3
4,343,286	+		DZA65_RS20050	0.50	-0.3
4,343,286	+		DZA65_RS20050	0.50	-1.0
4,343,286	+		DZA65_RS20050	0.50	+0.6
4,343,286	+		DZA65_RS20050	0.50	+1.0
4,343,287	-		DZA65_RS20050	0.50	-0.5
4,343,287	-		DZA65_RS20050	0.50	+0.2
4,343,287	-		DZA65_RS20050	0.50	+0.0
4,343,287	-		DZA65_RS20050	0.50	+0.3
4,343,289	+		DZA65_RS20050	0.50	+0.8
4,343,290	-		DZA65_RS20050	0.50	+0.0
4,343,290	-		DZA65_RS20050	0.50	+0.0
4,343,290	-		DZA65_RS20050	0.50	+0.4
4,343,290	-		DZA65_RS20050	0.50	+0.6
4,343,290	-		DZA65_RS20050	0.50	-0.3
4,343,294	-		DZA65_RS20050	0.51	-0.4
4,343,340	+		DZA65_RS20050	0.51	-1.8
4,343,340	+				-1.6
4,343,343	+		DZA65_RS20050	0.51	-1.6
4,343,344	-		DZA65_RS20050	0.51	-0.3
4,343,344	-		DZA65_RS20050	0.51	-3.1
4,343,344	-		DZA65_RS20050	0.51	-1.3
4,343,351	+		DZA65_RS20050	0.51	-0.8
4,343,351	+		DZA65_RS20050	0.51	-0.2
4,343,351	+		DZA65_RS20050	0.51	+0.4
4,343,351	+		DZA65_RS20050	0.51	-0.8
4,343,351	+		DZA65_RS20050	0.51	-2.4
4,343,351	+		DZA65_RS20050	0.51	-0.1
4,343,351	+		DZA65_RS20050	0.51	+1.0
4,343,351	+		DZA65_RS20050	0.51	+0.4
4,343,352	-		DZA65_RS20050	0.52	+1.0
4,343,352	-		DZA65_RS20050	0.52	+0.0
4,343,352	-		DZA65_RS20050	0.52	-0.1
4,343,352	-		DZA65_RS20050	0.52	+0.7
4,343,352	-		DZA65_RS20050	0.52	-1.1
4,343,352	-		DZA65_RS20050	0.52	+0.7
4,343,352	-		DZA65_RS20050	0.52	-1.8
4,343,406	+		DZA65_RS20050	0.52	+1.1
4,343,407	-		DZA65_RS20050	0.52	-2.0
4,343,407	-		DZA65_RS20050	0.52	-0.0
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