Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19645

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,252,230	+		DZA65_RS19635	0.20	-1.7
4,252,230	+		DZA65_RS19635	0.20	+0.6
4,252,230	+		DZA65_RS19635	0.20	-0.0
4,252,231	-		DZA65_RS19635	0.20	-0.0
4,252,231	-		DZA65_RS19635	0.20	+0.1
4,252,231	-		DZA65_RS19635	0.20	-0.3
4,252,326	+		DZA65_RS19635	0.37	+0.1
4,252,326	+		DZA65_RS19635	0.37	-0.5
4,252,326	+		DZA65_RS19635	0.37	-1.8
4,252,380	+		DZA65_RS19635	0.46	-0.6
4,252,488	+		DZA65_RS19635	0.65	-0.0
4,252,488	+		DZA65_RS19635	0.65	-0.4
4,252,488	+		DZA65_RS19635	0.65	-1.1
4,252,488	+		DZA65_RS19635	0.65	+0.7
4,252,488	+		DZA65_RS19635	0.65	-1.9
4,252,653	+				-0.6
4,252,653	+				-0.0
4,252,656	+				+1.3
4,252,656	+				-0.3
4,252,656	+				-1.2
4,252,656	+				-0.3
4,252,694	+				+0.6
4,253,112	+				+0.7
4,253,113	-				+0.3
4,253,123	+				+1.0
4,253,123	+				+1.4
4,253,123	+				-0.0
4,253,124	-				-0.1
4,253,124	-				-1.3
4,253,124	-				-0.1
4,253,124	-				-0.6
4,253,124	-				+0.3
4,253,124	-				-0.0
4,253,127	+				-0.0
4,253,127	+				-1.2
4,253,127	+				-0.6
4,253,127	+				+0.3
4,253,127	+				+0.6
4,253,127	+				-0.7
4,253,127	+				+0.2
4,253,128	-				-1.1
4,253,128	-				-0.2
4,253,128	-				+2.0
4,253,141	+				-0.2
4,253,236	-				+2.4
4,253,236	-				+1.4
4,253,304	-		DZA65_RS19645	0.11	-0.1
4,253,372	-		DZA65_RS19645	0.18	-1.2
4,253,422	+		DZA65_RS19645	0.23	-2.8
4,253,422	+		DZA65_RS19645	0.23	-0.6
4,253,422	+		DZA65_RS19645	0.23	-0.3
4,253,422	+		DZA65_RS19645	0.23	-0.6
4,253,423	-		DZA65_RS19645	0.23	+1.4
4,253,423	-		DZA65_RS19645	0.23	-1.0
4,253,426	+		DZA65_RS19645	0.23	+0.6
4,253,427	-		DZA65_RS19645	0.23	-0.0
4,253,445	-		DZA65_RS19645	0.25	-0.3
4,253,474	+		DZA65_RS19645	0.28	-0.0
4,253,476	+		DZA65_RS19645	0.28	-0.8
4,253,476	+		DZA65_RS19645	0.28	-1.3
4,253,477	-		DZA65_RS19645	0.28	+1.0
4,253,524	+		DZA65_RS19645	0.33	-0.6
4,253,524	+		DZA65_RS19645	0.33	+1.0
4,253,524	+		DZA65_RS19645	0.33	-0.0
4,253,524	+		DZA65_RS19645	0.33	-1.3
4,253,525	-		DZA65_RS19645	0.33	+0.4
4,253,525	-		DZA65_RS19645	0.33	-0.0
4,253,525	-		DZA65_RS19645	0.33	+3.1
4,253,525	-		DZA65_RS19645	0.33	-0.2
4,253,525	-		DZA65_RS19645	0.33	-0.5
4,253,533	+		DZA65_RS19645	0.34	-0.0
4,253,534	-		DZA65_RS19645	0.34	+0.5
4,253,534	-		DZA65_RS19645	0.34	-1.2
4,253,534	-		DZA65_RS19645	0.34	-0.3
4,253,534	-		DZA65_RS19645	0.34	-0.1
4,253,534	-		DZA65_RS19645	0.34	-2.0
4,253,534	-		DZA65_RS19645	0.34	+0.2
4,253,559	-		DZA65_RS19645	0.36	-1.0
4,253,559	-		DZA65_RS19645	0.36	-0.7
4,253,559	-		DZA65_RS19645	0.36	-0.6
4,253,559	-		DZA65_RS19645	0.36	-1.1
4,253,563	+		DZA65_RS19645	0.37	-1.6
4,253,563	+				-1.0
4,253,563	+		DZA65_RS19645	0.37	-0.3
4,253,563	+		DZA65_RS19645	0.37	+0.4
4,253,563	+		DZA65_RS19645	0.37	-1.0
4,253,564	-		DZA65_RS19645	0.37	+0.5
4,253,564	-		DZA65_RS19645	0.37	-0.3
4,253,564	-		DZA65_RS19645	0.37	-1.6
4,253,564	-		DZA65_RS19645	0.37	-0.5
4,253,564	-		DZA65_RS19645	0.37	-0.0
4,253,584	+		DZA65_RS19645	0.39	-1.8
4,253,584	+		DZA65_RS19645	0.39	+0.5
4,253,584	+		DZA65_RS19645	0.39	-0.6
4,253,584	+		DZA65_RS19645	0.39	-1.6
4,253,584	+		DZA65_RS19645	0.39	-2.5
4,253,584	+		DZA65_RS19645	0.39	-0.0
4,253,585	-		DZA65_RS19645	0.39	-1.3
4,253,585	-		DZA65_RS19645	0.39	-0.8
4,253,585	-		DZA65_RS19645	0.39	-2.7
4,253,585	-		DZA65_RS19645	0.39	-0.7
4,253,653	+		DZA65_RS19645	0.46	-1.8
4,253,653	+		DZA65_RS19645	0.46	-2.6
4,253,653	+		DZA65_RS19645	0.46	-1.2
4,253,653	+		DZA65_RS19645	0.46	-1.1
4,253,653	+		DZA65_RS19645	0.46	-1.0
4,253,653	+		DZA65_RS19645	0.46	-1.8
4,253,653	+		DZA65_RS19645	0.46	-1.6
4,253,653	+		DZA65_RS19645	0.46	-2.3
4,253,653	+		DZA65_RS19645	0.46	-0.3
4,253,653	+		DZA65_RS19645	0.46	-0.0
4,253,654	-		DZA65_RS19645	0.46	-1.7
4,253,654	-		DZA65_RS19645	0.46	-0.2
4,253,654	-		DZA65_RS19645	0.46	-1.0
4,253,654	-		DZA65_RS19645	0.46	+0.7
4,253,654	-		DZA65_RS19645	0.46	+0.3
4,253,654	-		DZA65_RS19645	0.46	-0.3
4,253,654	-		DZA65_RS19645	0.46	+1.0
4,253,654	-		DZA65_RS19645	0.46	-0.6
4,253,654	-		DZA65_RS19645	0.46	-0.2
4,253,654	-		DZA65_RS19645	0.46	+0.2
4,253,654	-		DZA65_RS19645	0.46	-0.0
4,253,654	-		DZA65_RS19645	0.46	-0.3
4,253,654	-		DZA65_RS19645	0.46	-1.0
4,253,657	+		DZA65_RS19645	0.46	+0.2
4,253,657	+		DZA65_RS19645	0.46	-1.8
4,253,657	+		DZA65_RS19645	0.46	-0.7
4,253,657	+		DZA65_RS19645	0.46	-0.3
4,253,658	-		DZA65_RS19645	0.46	-0.9
4,253,658	-		DZA65_RS19645	0.46	-1.3
4,253,686	+		DZA65_RS19645	0.49	-0.8
4,253,686	+		DZA65_RS19645	0.49	+1.0
4,253,686	+		DZA65_RS19645	0.49	-1.8
4,253,686	+		DZA65_RS19645	0.49	-0.4
4,253,686	+		DZA65_RS19645	0.49	-1.8
4,253,687	-		DZA65_RS19645	0.49	-3.5
4,253,687	-		DZA65_RS19645	0.49	+0.3
4,253,687	-		DZA65_RS19645	0.49	-2.2
4,253,687	-		DZA65_RS19645	0.49	+0.3
4,253,687	-		DZA65_RS19645	0.49	-0.6
4,253,710	+		DZA65_RS19645	0.51	-1.1
4,253,710	+		DZA65_RS19645	0.51	-4.1
4,253,712	+		DZA65_RS19645	0.52	+1.1
4,253,712	+		DZA65_RS19645	0.52	+2.0
4,253,712	+		DZA65_RS19645	0.52	-2.0
4,253,712	+		DZA65_RS19645	0.52	-0.3
4,253,712	+		DZA65_RS19645	0.52	-0.3
4,253,713	-		DZA65_RS19645	0.52	-0.6
4,253,717	+		DZA65_RS19645	0.52	-1.4
4,253,717	+		DZA65_RS19645	0.52	-1.2
4,253,717	+		DZA65_RS19645	0.52	-0.6
4,253,718	-		DZA65_RS19645	0.52	+0.4
4,253,718	-		DZA65_RS19645	0.52	-1.6
4,253,718	-		DZA65_RS19645	0.52	-0.9
4,253,719	+		DZA65_RS19645	0.52	-0.9
4,253,719	+		DZA65_RS19645	0.52	-1.8
4,253,719	+		DZA65_RS19645	0.52	-1.6
4,253,720	-		DZA65_RS19645	0.52	+1.0
4,253,720	-		DZA65_RS19645	0.52	-1.6
4,253,720	-		DZA65_RS19645	0.52	-1.0
4,253,720	-		DZA65_RS19645	0.52	-2.0
4,253,800	+		DZA65_RS19645	0.60	-1.7
4,253,800	+		DZA65_RS19645	0.60	-0.6
4,253,804	+		DZA65_RS19645	0.61	-0.5
4,253,804	+		DZA65_RS19645	0.61	-1.3
4,253,804	+		DZA65_RS19645	0.61	+0.8
4,253,805	-		DZA65_RS19645	0.61	+3.0
4,253,872	-		DZA65_RS19645	0.68	-2.2
4,253,872	-		DZA65_RS19645	0.68	-0.0
4,253,872	-		DZA65_RS19645	0.68	-1.0
4,253,872	-		DZA65_RS19645	0.68	-1.1
4,253,878	+		DZA65_RS19645	0.68	-0.2
4,253,878	+		DZA65_RS19645	0.68	-1.0
4,253,878	+		DZA65_RS19645	0.68	-0.0
4,253,878	+		DZA65_RS19645	0.68	-0.9
4,253,878	+		DZA65_RS19645	0.68	-1.8
4,253,878	+		DZA65_RS19645	0.68	-1.6
4,253,879	-		DZA65_RS19645	0.68	-1.1
4,253,879	-		DZA65_RS19645	0.68	-1.3
4,253,879	-		DZA65_RS19645	0.68	-3.3
4,253,879	-		DZA65_RS19645	0.68	-2.0
4,253,879	-		DZA65_RS19645	0.68	-0.4
4,253,912	+		DZA65_RS19645	0.72	-0.2
4,253,913	-		DZA65_RS19645	0.72	+0.4
4,253,995	+		DZA65_RS19645	0.80	+0.1
4,253,996	-		DZA65_RS19645	0.80	-1.6
4,254,056	+		DZA65_RS19645	0.86	+0.1
4,254,057	-		DZA65_RS19645	0.86	-2.5
4,254,176	+				-0.8
4,254,197	+				-0.7
4,254,197	+				+0.1
4,254,197	+				-0.0
4,254,198	-				-0.4
4,254,204	-				+1.4
4,254,204	-				+0.4
4,254,204	-				-0.0
4,254,288	+				-1.7
4,254,292	+				-1.8
4,254,293	-				-0.0
4,254,308	+				-1.1
4,254,315	+				+0.7
4,254,327	+				+0.5
4,254,328	-				+0.4
4,254,352	+				-0.6
4,254,352	+				-0.2
4,254,352	+				+0.8
4,254,353	-				+0.6
4,254,354	+				-0.6
4,254,354	+				-1.8
4,254,354	+				+1.4
4,254,354	+				+1.4
4,254,354	+				-0.2
4,254,355	-				+1.0
4,254,355	-				-2.6
4,254,355	-				+1.0
4,254,355	-				+0.7
4,254,355	-				+0.7
4,254,355	-				-3.2
4,254,367	+				-0.2
4,254,367	+				-1.6
4,254,367	+				-0.0
4,254,367	+				+0.4
4,254,368	-				+0.4
4,254,368	-				+0.2
4,254,368	-				-0.2
4,254,373	+				-3.0
4,254,373	+				-0.0
4,254,373	+				+0.2
4,254,374	-				+0.3
4,254,374	-				-0.3
4,254,374	-				+0.4
4,254,384	+				+0.4
4,254,464	-				-0.0
4,254,484	+				+0.3
4,254,484	+				+0.3
4,254,484	+				+1.5
4,254,485	-				+0.1
4,254,485	-				-0.6
4,254,489	+				-0.4
4,254,489	+				+0.2
4,254,490	-				+0.6
4,254,508	+		DZA65_RS19650	0.10	-0.0
4,254,508	+		DZA65_RS19650	0.10	+1.0
4,254,509	-		DZA65_RS19650	0.10	+1.2
4,254,509	-		DZA65_RS19650	0.10	-1.3
4,254,509	-		DZA65_RS19650	0.10	+1.6
4,254,525	-		DZA65_RS19650	0.11	-0.1
4,254,622	+		DZA65_RS19650	0.18	+0.3
4,254,623	-		DZA65_RS19650	0.18	-0.4
4,254,623	-		DZA65_RS19650	0.18	-0.4
4,254,623	-		DZA65_RS19650	0.18	+1.7
4,254,623	-		DZA65_RS19650	0.18	-1.3
4,254,629	+		DZA65_RS19650	0.19	-1.9
4,254,629	+		DZA65_RS19650	0.19	+0.7
4,254,629	+		DZA65_RS19650	0.19	+0.3
4,254,629	+		DZA65_RS19650	0.19	-0.0
4,254,629	+		DZA65_RS19650	0.19	+2.0
4,254,629	+		DZA65_RS19650	0.19	+1.2
4,254,629	+		DZA65_RS19650	0.19	+0.4
4,254,629	+		DZA65_RS19650	0.19	-0.3
4,254,629	+		DZA65_RS19650	0.19	-0.0
4,254,629	+		DZA65_RS19650	0.19	+0.6
4,254,629	+		DZA65_RS19650	0.19	+1.1
4,254,630	-		DZA65_RS19650	0.19	-1.8
4,254,630	-		DZA65_RS19650	0.19	-0.0
4,254,630	-		DZA65_RS19650	0.19	+1.8
4,254,630	-		DZA65_RS19650	0.19	+0.2
4,254,630	-		DZA65_RS19650	0.19	+0.1
4,254,630	-		DZA65_RS19650	0.19	-1.5
4,254,630	-		DZA65_RS19650	0.19	-1.0
4,254,630	-		DZA65_RS19650	0.19	-0.0
4,254,630	-		DZA65_RS19650	0.19	+1.1
4,254,631	+		DZA65_RS19650	0.19	+1.0
4,254,631	+		DZA65_RS19650	0.19	-0.2
4,254,631	+		DZA65_RS19650	0.19	+0.6
4,254,631	+		DZA65_RS19650	0.19	-1.2
4,254,631	+		DZA65_RS19650	0.19	-1.3
4,254,631	+		DZA65_RS19650	0.19	+0.1
4,254,631	+		DZA65_RS19650	0.19	+2.0
4,254,631	+		DZA65_RS19650	0.19	+0.2
4,254,631	+		DZA65_RS19650	0.19	+0.4
4,254,631	+		DZA65_RS19650	0.19	-0.1
4,254,631	+		DZA65_RS19650	0.19	-1.8
4,254,631	+		DZA65_RS19650	0.19	+0.4
4,254,631	+		DZA65_RS19650	0.19	-1.1
4,254,631	+		DZA65_RS19650	0.19	-1.1
4,254,632	-		DZA65_RS19650	0.19	+0.3
4,254,632	-		DZA65_RS19650	0.19	-0.2
4,254,632	-		DZA65_RS19650	0.19	+0.7
4,254,632	-		DZA65_RS19650	0.19	-0.3
4,254,632	-		DZA65_RS19650	0.19	-0.2
4,254,632	-		DZA65_RS19650	0.19	-1.6
4,254,632	-		DZA65_RS19650	0.19	+0.2
4,254,632	-		DZA65_RS19650	0.19	-0.7
4,254,632	-		DZA65_RS19650	0.19	-0.8
4,254,632	-		DZA65_RS19650	0.19	+0.4
4,254,632	-		DZA65_RS19650	0.19	-0.1
4,254,632	-		DZA65_RS19650	0.19	-0.0
4,254,632	-		DZA65_RS19650	0.19	-0.6
4,254,632	-		DZA65_RS19650	0.19	+0.9
4,254,632	-		DZA65_RS19650	0.19	-0.0
4,254,632	-		DZA65_RS19650	0.19	-0.6
4,254,632	-		DZA65_RS19650	0.19	+0.1
4,254,632	-		DZA65_RS19650	0.19	-0.5
4,254,632	-		DZA65_RS19650	0.19	-0.2
4,254,632	-		DZA65_RS19650	0.19	-1.3
4,254,632	-		DZA65_RS19650	0.19	-0.5
4,254,632	-		DZA65_RS19650	0.19	-2.2
4,254,632	-		DZA65_RS19650	0.19	+0.9
4,254,632	-		DZA65_RS19650	0.19	+0.4
4,254,632	-		DZA65_RS19650	0.19	+0.8
4,254,632	-		DZA65_RS19650	0.19	+0.4
4,254,632	-		DZA65_RS19650	0.19	+1.0
4,254,725	-		DZA65_RS19650	0.26	-0.4
4,254,851	+		DZA65_RS19650	0.35	+0.6
4,254,852	-		DZA65_RS19650	0.35	+1.0
4,254,893	+		DZA65_RS19650	0.38	+0.7
4,254,893	+		DZA65_RS19650	0.38	-1.0
4,254,893	+		DZA65_RS19650	0.38	-1.0
4,254,893	+		DZA65_RS19650	0.38	-1.6
4,254,893	+		DZA65_RS19650	0.38	+0.4
4,254,894	-		DZA65_RS19650	0.38	+0.5
4,254,894	-		DZA65_RS19650	0.38	+1.0
4,254,909	+		DZA65_RS19650	0.39	-0.6
4,254,909	+		DZA65_RS19650	0.39	+0.4
4,254,909	+		DZA65_RS19650	0.39	+0.2
4,255,149	+		DZA65_RS19650	0.56	+1.1
4,255,149	+		DZA65_RS19650	0.56	+0.5
4,255,149	+		DZA65_RS19650	0.56	+1.2
4,255,150	-		DZA65_RS19650	0.57	+0.6
4,255,150	-		DZA65_RS19650	0.57	-0.0
4,255,150	-		DZA65_RS19650	0.57	-0.5
4,255,150	-		DZA65_RS19650	0.57	+1.0
4,255,150	-		DZA65_RS19650	0.57	-0.2
4,255,150	-		DZA65_RS19650	0.57	-0.3
4,255,151	+		DZA65_RS19650	0.57	-0.9
4,255,151	+		DZA65_RS19650	0.57	-1.6
4,255,151	+		DZA65_RS19650	0.57	+0.3
4,255,151	+		DZA65_RS19650	0.57	+0.7
4,255,152	-		DZA65_RS19650	0.57	-0.0
4,255,152	-		DZA65_RS19650	0.57	-1.1
4,255,152	-		DZA65_RS19650	0.57	-0.3
4,255,152	-		DZA65_RS19650	0.57	+1.4
4,255,152	-		DZA65_RS19650	0.57	-0.8
4,255,152	-		DZA65_RS19650	0.57	+0.5
4,255,152	-		DZA65_RS19650	0.57	-0.2
4,255,164	+		DZA65_RS19650	0.58	+0.4
4,255,164	+		DZA65_RS19650	0.58	+0.2
4,255,164	+		DZA65_RS19650	0.58	-1.5
4,255,164	+		DZA65_RS19650	0.58	+1.5
4,255,165	-		DZA65_RS19650	0.58	-2.0
4,255,165	-		DZA65_RS19650	0.58	+0.1
4,255,165	-		DZA65_RS19650	0.58	+0.2
4,255,165	-		DZA65_RS19650	0.58	+1.1