Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17565

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,784,872	+				+1.0
3,784,873	-				+0.4
3,784,873	-				+0.8
3,784,873	-				+0.8
3,784,877	+				+0.3
3,784,896	+				-0.6
3,784,915	+				-0.3
3,784,916	-				+0.6
3,784,916	-				+0.2
3,784,916	-				-0.8
3,784,916	-				-2.0
3,784,916	-				-0.2
3,784,916	-				+1.8
3,784,921	+				+0.2
3,784,921	+				-0.1
3,784,921	+				-1.7
3,784,921	+				-1.9
3,784,921	+				+0.8
3,784,921	+				-0.0
3,784,922	-				+0.3
3,784,922	-				+0.6
3,784,922	-				+0.6
3,784,922	-				+3.8
3,784,922	-				+0.3
3,784,922	-				+0.8
3,784,994	+				+0.0
3,785,040	+				-0.5
3,785,040	+				-0.2
3,785,040	+				+0.8
3,785,041	-				+0.6
3,785,041	-				-1.2
3,785,041	-				-0.8
3,785,041	-				-0.1
3,785,044	+				+0.8
3,785,044	+				+0.8
3,785,044	+				+2.2
3,785,044	+				+0.8
3,785,044	+				+0.8
3,785,044	+				+1.1
3,785,044	+				-2.1
3,785,044	+				-1.4
3,785,044	+				+0.6
3,785,045	-				-0.4
3,785,045	-				-1.1
3,785,045	-				+0.8
3,785,045	-				+0.8
3,785,045	-				+2.4
3,785,125	+		DZA65_RS17560	0.13	+0.5
3,785,125	+		DZA65_RS17560	0.13	+0.6
3,785,126	-		DZA65_RS17560	0.14	+0.9
3,785,189	-		DZA65_RS17560	0.22	-0.4
3,785,223	+		DZA65_RS17560	0.26	+0.1
3,785,223	+		DZA65_RS17560	0.26	+0.5
3,785,223	+		DZA65_RS17560	0.26	-2.0
3,785,223	+		DZA65_RS17560	0.26	-1.5
3,785,223	+		DZA65_RS17560	0.26	-0.1
3,785,224	-		DZA65_RS17560	0.26	+0.4
3,785,244	+		DZA65_RS17560	0.29	-1.4
3,785,336	+		DZA65_RS17560	0.41	-0.4
3,785,337	-		DZA65_RS17560	0.41	+1.2
3,785,358	+		DZA65_RS17560	0.44	+0.5
3,785,358	+		DZA65_RS17560	0.44	-0.9
3,785,358	+		DZA65_RS17560	0.44	+0.7
3,785,358	+		DZA65_RS17560	0.44	-0.4
3,785,358	+		DZA65_RS17560	0.44	-0.7
3,785,358	+		DZA65_RS17560	0.44	+0.2
3,785,358	+		DZA65_RS17560	0.44	+1.7
3,785,359	-		DZA65_RS17560	0.44	+0.1
3,785,359	-		DZA65_RS17560	0.44	+0.5
3,785,359	-		DZA65_RS17560	0.44	-0.4
3,785,359	-		DZA65_RS17560	0.44	+0.4
3,785,362	+		DZA65_RS17560	0.44	-1.7
3,785,363	-		DZA65_RS17560	0.44	-0.7
3,785,363	-		DZA65_RS17560	0.44	-0.6
3,785,363	-		DZA65_RS17560	0.44	+0.7
3,785,363	-		DZA65_RS17560	0.44	+0.4
3,785,427	+		DZA65_RS17560	0.52	+1.1
3,785,427	+		DZA65_RS17560	0.52	-1.2
3,785,428	-		DZA65_RS17560	0.53	-0.4
3,785,487	+		DZA65_RS17560	0.60	-0.0
3,785,488	-		DZA65_RS17560	0.60	+2.8
3,785,549	-		DZA65_RS17560	0.68	+0.3
3,785,549	-		DZA65_RS17560	0.68	+0.8
3,785,549	-		DZA65_RS17560	0.68	-0.6
3,785,698	+		DZA65_RS17560	0.87	-0.1
3,785,698	+		DZA65_RS17560	0.87	-0.4
3,785,699	-		DZA65_RS17560	0.88	-0.1
3,785,699	-		DZA65_RS17560	0.88	-0.0
3,785,699	-		DZA65_RS17560	0.88	+0.4
3,785,699	-		DZA65_RS17560	0.88	-0.4
3,785,700	+		DZA65_RS17560	0.88	+0.1
3,785,700	+		DZA65_RS17560	0.88	+1.3
3,785,700	+		DZA65_RS17560	0.88	-0.2
3,785,700	+		DZA65_RS17560	0.88	-0.4
3,785,700	+		DZA65_RS17560	0.88	-0.6
3,785,701	-		DZA65_RS17560	0.88	+0.5
3,785,701	-		DZA65_RS17560	0.88	-0.5
3,785,701	-				-0.2
3,785,701	-		DZA65_RS17560	0.88	+1.0
3,785,708	+		DZA65_RS17560	0.89	+0.5
3,785,709	-		DZA65_RS17560	0.89	+0.2
3,785,709	-		DZA65_RS17560	0.89	-0.9
3,785,709	-		DZA65_RS17560	0.89	+1.8
3,785,718	+				+0.2
3,785,803	-				-0.7
3,785,803	-				+1.2
3,785,806	+				+0.3
3,785,806	+				-0.8
3,785,806	+				+0.8
3,785,806	+				+0.4
3,785,807	-				-0.8
3,785,807	-				+0.0
3,785,807	-				-0.7
3,785,936	+				+1.4
3,785,936	+				-0.5
3,785,943	+				-2.0
3,785,943	+				+1.4
3,785,943	+				-0.5
3,785,943	+				-1.0
3,785,943	+				+0.8
3,785,944	-				-0.2
3,785,992	+				+2.1
3,786,093	+		DZA65_RS17565	0.17	+0.6
3,786,163	+		DZA65_RS17565	0.23	+0.4
3,786,316	+		DZA65_RS17565	0.35	-1.1
3,786,317	-		DZA65_RS17565	0.35	-0.5
3,786,353	+		DZA65_RS17565	0.38	+0.6
3,786,353	+		DZA65_RS17565	0.38	-1.0
3,786,353	+		DZA65_RS17565	0.38	-0.3
3,786,353	+		DZA65_RS17565	0.38	+0.3
3,786,353	+		DZA65_RS17565	0.38	-1.8
3,786,353	+		DZA65_RS17565	0.38	+0.3
3,786,353	+		DZA65_RS17565	0.38	+0.7
3,786,353	+		DZA65_RS17565	0.38	+1.9
3,786,353	+		DZA65_RS17565	0.38	+0.2
3,786,353	+		DZA65_RS17565	0.38	-0.8
3,786,353	+				+0.2
3,786,354	-		DZA65_RS17565	0.38	-0.1
3,786,354	-		DZA65_RS17565	0.38	-0.3
3,786,354	-		DZA65_RS17565	0.38	-1.5
3,786,354	-		DZA65_RS17565	0.38	-0.7
3,786,354	-		DZA65_RS17565	0.38	-0.8
3,786,354	-		DZA65_RS17565	0.38	+0.6
3,786,357	+		DZA65_RS17565	0.38	+0.3
3,786,357	+		DZA65_RS17565	0.38	-1.8
3,786,357	+		DZA65_RS17565	0.38	-0.9
3,786,357	+		DZA65_RS17565	0.38	+1.1
3,786,379	+		DZA65_RS17565	0.40	-0.5
3,786,394	+		DZA65_RS17565	0.41	-0.1
3,786,426	+		DZA65_RS17565	0.43	-0.2
3,786,426	+		DZA65_RS17565	0.43	-0.2
3,786,426	+		DZA65_RS17565	0.43	+0.3
3,786,426	+		DZA65_RS17565	0.43	-0.7
3,786,426	+		DZA65_RS17565	0.43	+0.2
3,786,426	+		DZA65_RS17565	0.43	+0.4
3,786,426	+		DZA65_RS17565	0.43	-0.8
3,786,426	+		DZA65_RS17565	0.43	-1.0
3,786,426	+		DZA65_RS17565	0.43	-0.6
3,786,426	+		DZA65_RS17565	0.43	-0.9
3,786,426	+		DZA65_RS17565	0.43	-1.8
3,786,426	+		DZA65_RS17565	0.43	-1.0
3,786,426	+		DZA65_RS17565	0.43	+0.6
3,786,426	+		DZA65_RS17565	0.43	+0.1
3,786,426	+		DZA65_RS17565	0.43	-2.7
3,786,426	+		DZA65_RS17565	0.43	-0.4
3,786,427	-		DZA65_RS17565	0.43	+1.2
3,786,427	-		DZA65_RS17565	0.43	-0.0
3,786,427	-		DZA65_RS17565	0.43	-0.8
3,786,427	-		DZA65_RS17565	0.43	-2.0
3,786,427	-		DZA65_RS17565	0.43	-0.2
3,786,427	-		DZA65_RS17565	0.43	-0.2
3,786,427	-		DZA65_RS17565	0.43	+0.2
3,786,427	-		DZA65_RS17565	0.43	-1.2
3,786,427	-		DZA65_RS17565	0.43	-1.5
3,786,841	+		DZA65_RS17565	0.76	-0.5
3,786,841	+		DZA65_RS17565	0.76	-0.3
3,786,989	+		DZA65_RS17565	0.87	+0.4
3,786,989	+		DZA65_RS17565	0.87	+0.4
3,786,989	+		DZA65_RS17565	0.87	-0.1
3,786,990	-		DZA65_RS17565	0.87	+0.3
3,787,066	+				+0.5
3,787,066	+				-0.2
3,787,066	+				-1.2
3,787,104	+				-0.6
3,787,104	+				-1.0
3,787,104	+				+1.2
3,787,104	+				-0.7
3,787,105	-				+0.8
3,787,105	-				+1.6
3,787,150	+				+0.2
3,787,169	-				-0.7
3,787,172	+				-1.7
3,787,172	+				+0.3
3,787,172	+				+0.1
3,787,173	-				-0.9
3,787,173	-				-0.3
3,787,173	-				-1.0
3,787,173	-				-0.2
3,787,175	+				-3.0
3,787,189	+				+0.9
3,787,190	-				+0.5
3,787,203	+				-0.8
3,787,203	+				+0.1
3,787,203	+				-0.8
3,787,204	-				+0.7
3,787,249	+				+0.1
3,787,250	-				-0.2
3,787,250	-				+0.8
3,787,265	+				-1.5
3,787,266	-				-0.1
3,787,303	+				+0.5
3,787,322	+				-1.4
3,787,359	-				+0.6
3,787,409	+		DZA65_RS17570	0.11	+1.2
3,787,409	+		DZA65_RS17570	0.11	-0.2
3,787,409	+		DZA65_RS17570	0.11	-1.2
3,787,409	+		DZA65_RS17570	0.11	-0.2
3,787,410	-		DZA65_RS17570	0.11	-0.7
3,787,410	-		DZA65_RS17570	0.11	-3.1
3,787,410	-		DZA65_RS17570	0.11	+1.6
3,787,435	+		DZA65_RS17570	0.13	+1.9
3,787,446	+		DZA65_RS17570	0.14	-2.5
3,787,447	-		DZA65_RS17570	0.14	-0.5
3,787,467	+		DZA65_RS17570	0.15	+1.1
3,787,467	+		DZA65_RS17570	0.15	+0.2
3,787,467	+		DZA65_RS17570	0.15	-1.0
3,787,468	-		DZA65_RS17570	0.15	-0.1
3,787,563	-		DZA65_RS17570	0.21	-0.8
3,787,563	-		DZA65_RS17570	0.21	-0.6
3,787,563	-		DZA65_RS17570	0.21	-1.5
3,787,563	-		DZA65_RS17570	0.21	+1.0
3,787,674	-		DZA65_RS17570	0.28	-1.5
3,787,729	+		DZA65_RS17570	0.31	-0.2
3,787,743	+		DZA65_RS17570	0.32	-0.5
3,787,744	-		DZA65_RS17570	0.32	-1.5
3,787,869	+		DZA65_RS17570	0.40	+0.8
3,787,870	-		DZA65_RS17570	0.40	-1.5
3,787,870	-		DZA65_RS17570	0.40	+0.5
3,787,901	+		DZA65_RS17570	0.42	-0.5
3,787,901	+		DZA65_RS17570	0.42	+0.1
3,787,901	+		DZA65_RS17570	0.42	-0.2
3,787,902	-		DZA65_RS17570	0.42	-2.0
3,787,908	+		DZA65_RS17570	0.42	+1.6
3,787,909	-		DZA65_RS17570	0.42	+2.0
3,787,911	+		DZA65_RS17570	0.43	+0.5
3,787,911	+		DZA65_RS17570	0.43	-1.0
3,787,911	+		DZA65_RS17570	0.43	+2.8
3,787,911	+		DZA65_RS17570	0.43	+0.4
3,787,911	+		DZA65_RS17570	0.43	-1.3
3,787,911	+		DZA65_RS17570	0.43	+1.0
3,787,912	-		DZA65_RS17570	0.43	-0.2
3,787,912	-		DZA65_RS17570	0.43	+0.4
3,787,912	-		DZA65_RS17570	0.43	+0.8
3,787,912	-		DZA65_RS17570	0.43	-0.3
3,787,912	-		DZA65_RS17570	0.43	-0.8
3,787,912	-		DZA65_RS17570	0.43	-0.8
3,787,912	-		DZA65_RS17570	0.43	+1.4
3,787,915	-		DZA65_RS17570	0.43	+0.0
3,787,915	-		DZA65_RS17570	0.43	+0.6
3,787,915	-		DZA65_RS17570	0.43	+0.4
3,787,932	+		DZA65_RS17570	0.44	-1.1
3,787,959	+		DZA65_RS17570	0.46	-0.2
3,787,959	+		DZA65_RS17570	0.46	+0.8
3,787,960	-		DZA65_RS17570	0.46	-0.2
3,788,102	+		DZA65_RS17570	0.55	+0.8
3,788,102	+		DZA65_RS17570	0.55	-1.0
3,788,103	-		DZA65_RS17570	0.55	-0.0
3,788,103	-		DZA65_RS17570	0.55	+0.6
3,788,103	-		DZA65_RS17570	0.55	+0.8
3,788,103	-		DZA65_RS17570	0.55	+0.3
3,788,132	+		DZA65_RS17570	0.56	-0.7
3,788,140	+		DZA65_RS17570	0.57	+1.0
3,788,140	+		DZA65_RS17570	0.57	-1.2
3,788,141	-		DZA65_RS17570	0.57	+1.8
3,788,141	-		DZA65_RS17570	0.57	-0.5
3,788,141	-		DZA65_RS17570	0.57	-0.2