Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15620

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,393,872	+		DZA65_RS15615	0.45	-0.7
3,393,924	-		DZA65_RS15615	0.50	-0.4
3,394,006	-		DZA65_RS15615	0.58	+1.4
3,394,046	+		DZA65_RS15615	0.61	+0.5
3,394,046	+		DZA65_RS15615	0.61	-1.5
3,394,046	+		DZA65_RS15615	0.61	+1.4
3,394,046	+		DZA65_RS15615	0.61	+0.0
3,394,046	+		DZA65_RS15615	0.61	-0.6
3,394,046	+				+2.9
3,394,046	+		DZA65_RS15615	0.61	+0.4
3,394,046	+		DZA65_RS15615	0.61	-0.8
3,394,047	-		DZA65_RS15615	0.61	-0.4
3,394,047	-		DZA65_RS15615	0.61	-0.1
3,394,047	-		DZA65_RS15615	0.61	+0.2
3,394,047	-		DZA65_RS15615	0.61	-0.5
3,394,047	-		DZA65_RS15615	0.61	-0.6
3,394,055	+		DZA65_RS15615	0.62	+0.7
3,394,056	-		DZA65_RS15615	0.62	-0.4
3,394,056	-		DZA65_RS15615	0.62	-0.4
3,394,056	-		DZA65_RS15615	0.62	+0.3
3,394,056	-		DZA65_RS15615	0.62	-0.3
3,394,127	+		DZA65_RS15615	0.69	+2.9
3,394,143	+		DZA65_RS15615	0.70	-1.5
3,394,144	-		DZA65_RS15615	0.71	-1.4
3,394,193	-		DZA65_RS15615	0.75	-0.8
3,394,203	+		DZA65_RS15615	0.76	+1.9
3,394,203	+		DZA65_RS15615	0.76	+0.6
3,394,203	+		DZA65_RS15615	0.76	-1.4
3,394,203	+		DZA65_RS15615	0.76	-0.3
3,394,204	-		DZA65_RS15615	0.76	+1.2
3,394,204	-		DZA65_RS15615	0.76	+2.8
3,394,204	-		DZA65_RS15615	0.76	+0.8
3,394,206	+		DZA65_RS15615	0.76	+0.4
3,394,206	+		DZA65_RS15615	0.76	-0.4
3,394,206	+		DZA65_RS15615	0.76	+0.9
3,394,206	+		DZA65_RS15615	0.76	-0.6
3,394,206	+		DZA65_RS15615	0.76	-0.5
3,394,206	+		DZA65_RS15615	0.76	-0.3
3,394,206	+		DZA65_RS15615	0.76	-0.4
3,394,207	-		DZA65_RS15615	0.76	+1.4
3,394,207	-		DZA65_RS15615	0.76	-1.0
3,394,207	-		DZA65_RS15615	0.76	-0.7
3,394,207	-		DZA65_RS15615	0.76	-0.8
3,394,252	-		DZA65_RS15615	0.81	-0.6
3,394,252	-		DZA65_RS15615	0.81	+9.7
3,394,328	+		DZA65_RS15615	0.88	-1.1
3,394,328	+		DZA65_RS15615	0.88	+0.1
3,394,328	+		DZA65_RS15615	0.88	+1.2
3,394,328	+		DZA65_RS15615	0.88	+0.5
3,394,328	+		DZA65_RS15615	0.88	-0.5
3,394,328	+		DZA65_RS15615	0.88	-0.3
3,394,329	-		DZA65_RS15615	0.88	-0.1
3,394,329	-		DZA65_RS15615	0.88	-0.7
3,394,329	-		DZA65_RS15615	0.88	-1.1
3,394,331	+		DZA65_RS15615	0.88	+0.8
3,394,331	+		DZA65_RS15615	0.88	+0.2
3,394,331	+		DZA65_RS15615	0.88	+1.2
3,394,331	+		DZA65_RS15615	0.88	+0.3
3,394,332	-		DZA65_RS15615	0.88	+0.3
3,394,332	-		DZA65_RS15615	0.88	-0.6
3,394,428	+				+0.4
3,394,428	+				+0.1
3,394,428	+				-0.5
3,394,429	-				+0.0
3,394,429	-				+1.6
3,394,455	+				-1.0
3,394,456	-				+0.4
3,394,456	-				-0.2
3,394,456	-				+0.0
3,394,470	+				+1.0
3,394,470	+				-0.3
3,394,471	-				-0.1
3,394,493	+				-0.3
3,394,493	+				-0.1
3,394,547	+				+0.7
3,394,547	+				+0.7
3,394,548	-				+1.1
3,394,548	-				-0.1
3,394,549	+				+0.4
3,394,549	+				-0.2
3,394,549	+				-2.5
3,394,549	+				-0.6
3,394,549	+				-0.5
3,394,549	+				-0.2
3,394,549	+				-0.6
3,394,549	+				-1.0
3,394,549	+				-0.4
3,394,549	+				-1.0
3,394,549	+				+0.1
3,394,549	+				-0.7
3,394,549	+				-0.4
3,394,549	+				-1.0
3,394,549	+				+0.9
3,394,549	+				-0.4
3,394,549	+				-0.1
3,394,549	+				+0.6
3,394,550	-				-0.0
3,394,550	-				-0.3
3,394,550	-				-0.6
3,394,550	-				+0.6
3,394,550	-				-1.0
3,394,550	-				+1.5
3,394,550	-				-0.2
3,394,550	-				-1.1
3,394,550	-				+0.1
3,394,550	-				+0.6
3,394,550	-				-2.0
3,394,550	-				+0.5
3,394,550	-				+1.0
3,394,550	-				+1.1
3,394,550	-				+0.5
3,394,550	-				+0.3
3,394,550	-				-2.0
3,394,557	+				+0.9
3,394,557	+				+0.3
3,394,557	+				-0.8
3,394,557	+				-1.0
3,394,558	-				-0.3
3,394,558	-				+0.1
3,394,558	-				-1.3
3,394,558	-				-0.6
3,394,558	-				-0.5
3,394,583	+				+0.6
3,394,583	+				-1.5
3,394,584	-				+0.2
3,394,584	-				-1.0
3,394,584	-				-0.7
3,394,584	-				+0.2
3,394,584	-				+1.8
3,394,584	-				-0.2
3,394,584	-				-1.3
3,394,584	-				+0.3
3,394,585	+				-0.2
3,394,585	+				+0.0
3,394,585	+				+2.0
3,394,585	+				+0.1
3,394,585	+				+0.7
3,394,585	+				+0.0
3,394,585	+				-0.8
3,394,585	+				-0.6
3,394,585	+				-1.2
3,394,585	+				+1.8
3,394,585	+				-0.7
3,394,585	+				-0.1
3,394,585	+				-0.2
3,394,585	+				+0.4
3,394,585	+				+3.3
3,394,585	+				-0.6
3,394,585	+				+1.0
3,394,585	+				-1.0
3,394,585	+				+0.2
3,394,585	+				+0.6
3,394,585	+				-0.7
3,394,585	+				-2.0
3,394,585	+				+3.2
3,394,585	+				-2.2
3,394,585	+				-1.7
3,394,585	+				+1.0
3,394,585	+				+1.1
3,394,585	+				-2.4
3,394,586	-				-0.6
3,394,586	-				-0.5
3,394,586	-				+0.0
3,394,586	-				-1.0
3,394,586	-				+0.9
3,394,586	-				-0.4
3,394,586	-				+0.6
3,394,586	-				+0.4
3,394,586	-				-0.5
3,394,586	-				-0.8
3,394,586	-				-2.0
3,394,586	-				+0.3
3,394,586	-				+0.4
3,394,586	-				+0.2
3,394,586	-				+0.6
3,394,586	-				-0.0
3,394,586	-				+0.2
3,394,586	-				+0.8
3,394,586	-				+0.4
3,394,586	-				+0.7
3,394,586	-				-1.3
3,394,586	-				-0.3
3,394,586	-				-1.0
3,394,586	-				+0.3
3,394,586	-				+0.6
3,394,586	-				-0.5
3,394,586	-				+0.2
3,394,586	-				-0.5
3,394,586	-				-1.3
3,394,586	-				+0.6
3,394,588	-				+0.2
3,394,588	-				-2.7
3,394,588	-				-0.3
3,394,588	-				-1.5
3,394,588	-				-0.1
3,394,588	-				-1.3
3,394,588	-				-2.1
3,394,597	-				-1.1
3,394,699	+				-0.5
3,394,699	+				+0.6
3,394,708	+				+0.0
3,394,708	+				-0.8
3,394,708	+				+0.3
3,394,710	+				-0.4
3,394,710	+				-0.2
3,394,710	+				+3.7
3,394,710	+				-1.4
3,394,710	+				+1.9
3,394,719	+				-0.4
3,394,736	+				+0.6
3,394,737	-				-1.5
3,394,746	+				+0.0
3,394,747	-				-0.7
3,394,747	-				+1.9
3,394,747	-				+0.6
3,394,749	+				-0.7
3,394,749	+				-1.0
3,394,750	-				-0.8
3,394,768	+				-0.4
3,394,769	-				-1.0
3,394,770	+				-0.4
3,394,771	-				-0.1
3,394,771	-				+0.2
3,394,771	-				-1.7
3,394,771	-				-0.2
3,394,793	-				+0.4
3,394,868	-				-0.4
3,394,877	+		DZA65_RS15620	0.11	+0.6
3,394,877	+		DZA65_RS15620	0.11	-0.8
3,394,878	-		DZA65_RS15620	0.11	-2.0
3,394,878	-		DZA65_RS15620	0.11	-1.8
3,394,978	-		DZA65_RS15620	0.28	-1.3
3,395,231	-		DZA65_RS15620	0.73	-0.2
3,395,231	-		DZA65_RS15620	0.73	-0.6
3,395,333	+				+0.1
3,395,370	+				-0.1
3,395,370	+				-0.3
3,395,371	-				+1.0
3,395,371	-				-1.0
3,395,371	-				-1.0
3,395,469	+				-0.7
3,395,469	+				-0.5
3,395,470	-				+0.9
3,395,472	+				+0.6
3,395,473	-				+1.2
3,395,473	-				-0.7
3,395,488	+				-1.7
3,395,489	-				-0.1
3,395,502	+				-1.2
3,395,503	-				-0.0
3,395,509	+				+0.9
3,395,509	+				+0.6
3,395,509	+				-0.6
3,395,509	+				-0.2
3,395,509	+				-0.7
3,395,510	-				-1.2
3,395,510	-				-0.3
3,395,530	+				+1.3
3,395,530	+				-0.1
3,395,531	-				-0.1
3,395,531	-				-0.2
3,395,550	-				+1.1
3,395,553	+				-0.6
3,395,553	+				-0.4
3,395,554	-				+0.4
3,395,554	-				-1.0
3,395,569	+				-0.5
3,395,569	+				+0.3
3,395,642	+				+0.2
3,395,643	-				+0.1
3,395,688	-				-1.3
3,395,688	-				-2.4
3,395,785	-				-0.3
3,395,842	-				-1.4
3,395,867	-				+0.4
3,395,867	-				+0.8
3,395,882	+				+0.0
3,395,883	-				-1.0
3,395,883	-				-0.3
3,395,883	-				-0.0
3,395,883	-				+1.6
3,395,883	-				+0.6
3,395,883	-				+2.1
3,395,888	+				-1.5
3,395,888	+				-0.7
3,395,888	+				+0.0
3,395,889	-				-1.7
3,395,903	+				+0.3
3,395,903	+				-0.3
3,395,904	-				+0.3
3,395,920	+				+0.0
3,395,920	+				+3.0
3,395,920	+				+0.6
3,395,920	+				+0.2
3,395,921	-				+0.9
3,395,921	-				-1.4
3,395,921	-				-0.4
3,395,921	-				-0.8
3,395,921	-				-1.4
3,395,921	-				-2.0
3,395,921	-				+0.7
3,395,921	-				-0.4
3,395,921	-				-0.4
3,395,941	+				+1.2
3,395,942	-				+0.2
3,395,942	-				-2.5
3,396,059	+				+0.4
3,396,059	+				-0.4
3,396,060	-				+0.0
3,396,060	-				-2.1
3,396,084	+				-0.4
3,396,084	+				-2.2
3,396,084	+				+0.8
3,396,084	+				-1.4
3,396,084	+				+0.6
3,396,084	+				+0.3
3,396,084	+				-1.1
3,396,084	+				-1.7
3,396,085	-				+0.3
3,396,085	-				-0.5
3,396,085	-				-0.4
3,396,085	-				+0.2
3,396,085	-				-2.4
3,396,124	+		DZA65_RS15625	0.61	-0.7
3,396,124	+		DZA65_RS15625	0.61	-0.1
3,396,124	+		DZA65_RS15625	0.61	+0.0
3,396,125	-		DZA65_RS15625	0.63	+1.4
3,396,128	+		DZA65_RS15625	0.67	-2.5
3,396,128	+		DZA65_RS15625	0.67	-0.5
3,396,128	+		DZA65_RS15625	0.67	-2.2
3,396,129	-		DZA65_RS15625	0.68	+0.3
3,396,162	+				-0.7
3,396,163	-				-1.1
3,396,214	+				-0.4