Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15250

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,309,273	+		DZA65_RS15240	0.73	-1.6
3,309,293	+		DZA65_RS15240	0.74	+1.5
3,309,352	-		DZA65_RS15240	0.77	+0.6
3,309,400	+		DZA65_RS15240	0.79	-1.0
3,309,401	-		DZA65_RS15240	0.79	+0.9
3,309,401	-		DZA65_RS15240	0.79	-0.2
3,309,415	+		DZA65_RS15240	0.80	-0.4
3,309,627	+				-0.3
3,309,628	-				+0.4
3,309,628	-				-1.2
3,309,628	-				-0.3
3,309,628	-				-0.4
3,309,641	+				-0.1
3,309,641	+				-0.4
3,309,642	-				-0.3
3,309,642	-				-0.1
3,309,642	-				-1.6
3,309,642	-				-0.1
3,309,676	+				-0.1
3,309,676	+				-0.2
3,309,676	+				-0.4
3,309,677	-				+0.0
3,309,677	-				-0.4
3,309,677	-				+0.6
3,309,677	-				+0.6
3,309,742	+				+1.0
3,309,791	-				-1.8
3,309,842	+				-0.0
3,309,842	+				-0.3
3,309,842	+				-0.1
3,309,842	+				-0.6
3,309,842	+				+0.3
3,309,842	+				-1.4
3,309,842	+				+1.3
3,309,917	+		DZA65_RS15245	0.37	-1.0
3,309,965	+		DZA65_RS15245	0.56	+1.3
3,309,976	+		DZA65_RS15245	0.61	+0.2
3,310,083	+				+0.8
3,310,088	+				-0.6
3,310,132	+				-0.3
3,310,254	+				+1.0
3,310,254	+				+0.1
3,310,318	+		DZA65_RS15250	0.14	-0.4
3,310,318	+		DZA65_RS15250	0.14	-0.8
3,310,318	+		DZA65_RS15250	0.14	+0.3
3,310,318	+		DZA65_RS15250	0.14	-0.7
3,310,318	+		DZA65_RS15250	0.14	-1.0
3,310,318	+		DZA65_RS15250	0.14	+0.6
3,310,318	+		DZA65_RS15250	0.14	+0.3
3,310,322	+		DZA65_RS15250	0.15	-1.0
3,310,322	+		DZA65_RS15250	0.15	-0.3
3,310,322	+		DZA65_RS15250	0.15	-0.1
3,310,322	+		DZA65_RS15250	0.15	-0.1
3,310,345	+		DZA65_RS15250	0.19	+0.4
3,310,345	+		DZA65_RS15250	0.19	+1.0
3,310,357	+		DZA65_RS15250	0.21	+0.1
3,310,357	+		DZA65_RS15250	0.21	-0.4
3,310,357	+		DZA65_RS15250	0.21	-0.4
3,310,357	+		DZA65_RS15250	0.21	+1.2
3,310,360	+		DZA65_RS15250	0.22	-1.7
3,310,366	-		DZA65_RS15250	0.23	-0.4
3,310,369	+		DZA65_RS15250	0.23	-0.1
3,310,369	+		DZA65_RS15250	0.23	+1.2
3,310,369	+		DZA65_RS15250	0.23	-0.1
3,310,369	+		DZA65_RS15250	0.23	+0.3
3,310,369	+		DZA65_RS15250	0.23	+1.8
3,310,369	+		DZA65_RS15250	0.23	-0.2
3,310,378	+		DZA65_RS15250	0.25	-0.2
3,310,378	+		DZA65_RS15250	0.25	-0.7
3,310,378	+		DZA65_RS15250	0.25	-0.3
3,310,378	+		DZA65_RS15250	0.25	-0.4
3,310,382	+		DZA65_RS15250	0.26	-1.2
3,310,382	+		DZA65_RS15250	0.26	-0.7
3,310,401	+		DZA65_RS15250	0.29	-2.0
3,310,401	+		DZA65_RS15250	0.29	-1.4
3,310,401	+		DZA65_RS15250	0.29	-0.4
3,310,470	+		DZA65_RS15250	0.41	+0.4
3,310,470	+		DZA65_RS15250	0.41	+0.3
3,310,471	-		DZA65_RS15250	0.42	+0.6
3,310,471	-		DZA65_RS15250	0.42	+0.4
3,310,471	-		DZA65_RS15250	0.42	+0.2
3,310,473	+		DZA65_RS15250	0.42	-1.7
3,310,535	-		DZA65_RS15250	0.53	+0.2
3,310,596	+		DZA65_RS15250	0.64	-0.0
3,310,632	+		DZA65_RS15250	0.70	+0.8
3,310,632	+		DZA65_RS15250	0.70	-0.7
3,310,632	+		DZA65_RS15250	0.70	+0.0
3,310,633	-		DZA65_RS15250	0.70	-0.8
3,310,645	+		DZA65_RS15250	0.73	+0.5
3,310,645	+		DZA65_RS15250	0.73	-0.4
3,310,645	+		DZA65_RS15250	0.73	+0.7
3,310,645	+		DZA65_RS15250	0.73	+0.3
3,310,646	-		DZA65_RS15250	0.73	-0.4
3,310,646	-		DZA65_RS15250	0.73	+0.0
3,310,646	-		DZA65_RS15250	0.73	-0.4
3,310,646	-		DZA65_RS15250	0.73	+0.2
3,310,646	-		DZA65_RS15250	0.73	-2.4
3,310,647	+		DZA65_RS15250	0.73	+1.2
3,310,647	+		DZA65_RS15250	0.73	-0.3
3,310,647	+		DZA65_RS15250	0.73	-1.4
3,310,647	+		DZA65_RS15250	0.73	+0.3
3,310,647	+		DZA65_RS15250	0.73	-0.4
3,310,647	+		DZA65_RS15250	0.73	+2.3
3,310,647	+		DZA65_RS15250	0.73	-0.4
3,310,647	+		DZA65_RS15250	0.73	+1.4
3,310,647	+		DZA65_RS15250	0.73	+0.1
3,310,647	+		DZA65_RS15250	0.73	+1.0
3,310,648	-		DZA65_RS15250	0.73	-0.1
3,310,648	-				+1.6
3,310,648	-		DZA65_RS15250	0.73	-0.5
3,310,648	-		DZA65_RS15250	0.73	+1.2
3,310,648	-		DZA65_RS15250	0.73	-0.7
3,310,648	-		DZA65_RS15250	0.73	+0.3
3,310,648	-		DZA65_RS15250	0.73	+0.1
3,310,648	-		DZA65_RS15250	0.73	+0.0
3,310,648	-		DZA65_RS15250	0.73	+0.2
3,310,686	+		DZA65_RS15250	0.80	-0.4
3,310,686	+		DZA65_RS15250	0.80	+0.0
3,310,686	+		DZA65_RS15250	0.80	-0.8
3,310,686	+		DZA65_RS15250	0.80	+0.3
3,310,686	+		DZA65_RS15250	0.80	-0.2
3,310,687	-		DZA65_RS15250	0.80	-0.4
3,310,687	-		DZA65_RS15250	0.80	+0.5
3,310,687	-		DZA65_RS15250	0.80	-1.3
3,310,689	+		DZA65_RS15250	0.80	+0.2
3,310,689	+		DZA65_RS15250	0.80	-0.6
3,310,689	+		DZA65_RS15250	0.80	+0.3
3,310,689	+		DZA65_RS15250	0.80	+1.1
3,310,689	+		DZA65_RS15250	0.80	-0.5
3,310,689	+		DZA65_RS15250	0.80	+0.8
3,310,689	+		DZA65_RS15250	0.80	+0.6
3,310,690	-		DZA65_RS15250	0.81	-0.4
3,310,690	-		DZA65_RS15250	0.81	+0.9
3,310,690	-		DZA65_RS15250	0.81	-0.4
3,310,690	-		DZA65_RS15250	0.81	+1.4
3,310,690	-		DZA65_RS15250	0.81	-0.5
3,310,690	-		DZA65_RS15250	0.81	-0.2
3,310,690	-		DZA65_RS15250	0.81	+2.2
3,310,690	-		DZA65_RS15250	0.81	-0.1
3,310,735	+		DZA65_RS15250	0.89	+0.6
3,310,735	+		DZA65_RS15250	0.89	+0.0
3,310,735	+		DZA65_RS15250	0.89	+1.4
3,310,735	+		DZA65_RS15250	0.89	-0.1
3,310,735	+		DZA65_RS15250	0.89	-0.4
3,310,735	+		DZA65_RS15250	0.89	+1.1
3,310,735	+		DZA65_RS15250	0.89	-2.4
3,310,735	+		DZA65_RS15250	0.89	+1.3
3,310,735	+		DZA65_RS15250	0.89	-0.4
3,310,735	+		DZA65_RS15250	0.89	+1.6
3,310,735	+		DZA65_RS15250	0.89	-0.6
3,310,735	+		DZA65_RS15250	0.89	+0.7
3,310,735	+		DZA65_RS15250	0.89	-1.0
3,310,736	-		DZA65_RS15250	0.89	-0.4
3,310,736	-		DZA65_RS15250	0.89	-1.2
3,310,736	-		DZA65_RS15250	0.89	-0.0
3,310,736	-		DZA65_RS15250	0.89	+1.4
3,310,796	+				-0.4
3,310,796	+				-0.6
3,310,807	+				-0.2
3,310,807	+				-1.2
3,310,807	+				+1.0
3,310,807	+				-0.1
3,310,807	+				-1.3
3,310,808	-				-1.0
3,310,808	-				+0.3
3,310,808	-				+0.4
3,310,808	-				+0.8
3,310,808	-				+0.2
3,310,808	-				+0.6
3,310,811	+				+0.9
3,310,811	+				-0.4
3,310,811	+				-0.6
3,310,811	+				+0.6
3,310,812	-				-2.0
3,310,812	-				-0.6
3,310,812	-				-1.2
3,310,812	-				-1.7
3,310,812	-				+0.6
3,310,812	-				-0.1
3,310,813	+				-0.1
3,310,854	+				+0.0
3,310,854	+				-1.5
3,310,864	+				-1.0
3,310,865	-				-0.4
3,310,956	+				-0.4
3,311,053	-				-1.0
3,311,055	+				+0.0
3,311,055	+				-0.6
3,311,056	-				+1.1
3,311,056	-				-1.0
3,311,060	+				-0.7
3,311,060	+				-0.8
3,311,060	+				-0.4
3,311,060	+				-0.4
3,311,061	-				-0.2
3,311,061	-				-0.6
3,311,061	-				+1.3
3,311,066	+				+0.3
3,311,066	+				-0.4
3,311,066	+				+0.8
3,311,066	+				+0.9
3,311,066	+				-0.7
3,311,066	+				-0.5
3,311,066	+				+0.6
3,311,066	+				+0.8
3,311,066	+				-0.2
3,311,066	+				+0.4
3,311,066	+				-0.4
3,311,066	+				-0.3
3,311,066	+				+0.2
3,311,066	+				-0.7
3,311,066	+				+0.3
3,311,067	-				-0.1
3,311,067	-				-0.7
3,311,067	-				-0.1
3,311,067	-				-0.8
3,311,067	-				-1.4
3,311,067	-				-0.1
3,311,067	-				+1.6
3,311,067	-				+0.8
3,311,067	-				+2.4
3,311,067	-				+1.9
3,311,100	-				+0.0
3,311,147	+		DZA65_RS15255	0.18	+0.3
3,311,148	-		DZA65_RS15255	0.18	+0.1
3,311,218	+		DZA65_RS15255	0.37	+0.2
3,311,218	+		DZA65_RS15255	0.37	-0.4
3,311,219	-		DZA65_RS15255	0.37	+0.6
3,311,277	+		DZA65_RS15255	0.53	-0.4
3,311,278	-		DZA65_RS15255	0.53	+0.3
3,311,278	-		DZA65_RS15255	0.53	-0.3
3,311,278	-		DZA65_RS15255	0.53	-0.7
3,311,402	+		DZA65_RS15255	0.87	-0.2
3,311,402	+		DZA65_RS15255	0.87	-0.7
3,311,403	-		DZA65_RS15255	0.87	-0.5
3,311,403	-		DZA65_RS15255	0.87	+0.6
3,311,444	+				-0.3
3,311,445	-				-0.8
3,311,445	-				-0.9
3,311,445	-				-1.4
3,311,445	-				+0.0
3,311,476	+				-0.6
3,311,476	+				-0.4
3,311,476	+				+0.0
3,311,480	+				-1.6
3,311,480	+				+1.3
3,311,480	+				-1.3
3,311,481	-				+1.3
3,311,582	-				-0.3
3,311,633	+				-0.7
3,311,664	+		DZA65_RS15260	0.10	+0.6
3,311,664	+		DZA65_RS15260	0.10	-0.2
3,311,664	+		DZA65_RS15260	0.10	-1.2
3,311,665	-		DZA65_RS15260	0.10	-0.9
3,311,665	-		DZA65_RS15260	0.10	+0.2
3,311,665	-		DZA65_RS15260	0.10	-0.1
3,311,665	-		DZA65_RS15260	0.10	+0.1
3,311,665	-		DZA65_RS15260	0.10	+0.6
3,311,665	-		DZA65_RS15260	0.10	-0.6
3,311,665	-		DZA65_RS15260	0.10	+0.6
3,311,665	-		DZA65_RS15260	0.10	-1.0