Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12930

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,772,542	-		DZA65_RS12925	0.12	-1.6
2,772,714	+		DZA65_RS12925	0.28	+0.2
2,772,714	+		DZA65_RS12925	0.28	+0.6
2,772,714	+		DZA65_RS12925	0.28	-0.6
2,772,732	+		DZA65_RS12925	0.30	-0.1
2,772,732	+		DZA65_RS12925	0.30	-1.2
2,772,733	-		DZA65_RS12925	0.30	+1.6
2,772,733	-		DZA65_RS12925	0.30	+0.0
2,772,733	-		DZA65_RS12925	0.30	+0.2
2,772,733	-		DZA65_RS12925	0.30	-0.3
2,772,745	+		DZA65_RS12925	0.31	-0.8
2,772,745	+		DZA65_RS12925	0.31	-1.5
2,772,746	-		DZA65_RS12925	0.31	+1.3
2,772,746	-		DZA65_RS12925	0.31	-0.3
2,772,761	+		DZA65_RS12925	0.32	-0.3
2,772,761	+		DZA65_RS12925	0.32	-1.2
2,772,761	+		DZA65_RS12925	0.32	+0.5
2,772,766	+		DZA65_RS12925	0.33	+1.7
2,772,767	-		DZA65_RS12925	0.33	-0.9
2,772,897	+		DZA65_RS12925	0.45	+1.1
2,772,897	+				-0.2
2,772,897	+		DZA65_RS12925	0.45	-1.6
2,772,898	-		DZA65_RS12925	0.45	-0.6
2,772,898	-		DZA65_RS12925	0.45	+0.2
2,772,898	-		DZA65_RS12925	0.45	-1.5
2,772,898	-		DZA65_RS12925	0.45	-0.2
2,772,899	+		DZA65_RS12925	0.45	+0.6
2,772,900	-		DZA65_RS12925	0.46	-0.4
2,773,044	-		DZA65_RS12925	0.59	-0.5
2,773,090	-		DZA65_RS12925	0.64	-0.6
2,773,197	+		DZA65_RS12925	0.74	+1.7
2,773,197	+		DZA65_RS12925	0.74	+0.2
2,773,197	+		DZA65_RS12925	0.74	+1.1
2,773,198	-		DZA65_RS12925	0.74	-0.8
2,773,198	-		DZA65_RS12925	0.74	-1.8
2,773,229	-		DZA65_RS12925	0.77	+1.4
2,773,427	+				+0.4
2,773,428	-				-0.4
2,773,482	+				-0.1
2,773,483	-				-0.1
2,773,483	-				-0.2
2,773,483	-				-0.0
2,773,522	-				-1.3
2,773,807	+		DZA65_RS12930	0.24	+1.0
2,773,808	-		DZA65_RS12930	0.24	+2.8
2,773,825	-		DZA65_RS12930	0.25	-0.3
2,773,845	+		DZA65_RS12930	0.26	-0.6
2,773,846	-		DZA65_RS12930	0.26	-0.2
2,773,846	-		DZA65_RS12930	0.26	-2.4
2,774,054	+		DZA65_RS12930	0.41	+0.9
2,774,081	+		DZA65_RS12930	0.43	-1.2
2,774,081	+		DZA65_RS12930	0.43	+0.0
2,774,081	+		DZA65_RS12930	0.43	-0.3
2,774,081	+				+0.4
2,774,082	-		DZA65_RS12930	0.43	-0.6
2,774,082	-		DZA65_RS12930	0.43	-0.6
2,774,082	-		DZA65_RS12930	0.43	-0.1
2,774,084	+		DZA65_RS12930	0.43	+0.3
2,774,084	+		DZA65_RS12930	0.43	+0.1
2,774,085	-		DZA65_RS12930	0.43	+0.4
2,774,085	-		DZA65_RS12930	0.43	+1.7
2,774,085	-		DZA65_RS12930	0.43	+0.2
2,774,274	-		DZA65_RS12930	0.57	+1.3
2,774,282	+		DZA65_RS12930	0.57	+0.2
2,774,283	-		DZA65_RS12930	0.57	-0.2
2,774,394	+		DZA65_RS12930	0.65	-1.0
2,774,395	-		DZA65_RS12930	0.65	+1.0
2,774,395	-		DZA65_RS12930	0.65	-1.8
2,774,424	-		DZA65_RS12930	0.67	-1.5
2,774,469	-		DZA65_RS12930	0.70	+0.0
2,774,486	+		DZA65_RS12930	0.72	-0.6
2,774,486	+		DZA65_RS12930	0.72	+1.9
2,774,487	-		DZA65_RS12930	0.72	+0.9
2,774,603	+		DZA65_RS12930	0.80	+0.1
2,774,604	-		DZA65_RS12930	0.80	+0.2
2,774,627	+		DZA65_RS12930	0.82	-0.4
2,774,628	-		DZA65_RS12930	0.82	-0.2
2,774,763	+				+0.8
2,774,763	+				+0.2
2,774,763	+				+0.3
2,774,776	-				+0.2
2,774,914	+				-0.6
2,774,915	-				+0.4
2,774,929	+				+2.7
2,774,956	+				+0.1
2,774,956	+				-2.6
2,774,957	-				-1.2
2,774,993	-				-0.9
2,774,993	-				-0.8
2,775,073	+				-0.8
2,775,073	+				-0.6
2,775,074	-				+0.1
2,775,075	+				-2.3
2,775,075	+				+0.0
2,775,075	+				-0.8
2,775,075	+				+0.6
2,775,075	+				-1.2
2,775,075	+				+0.1
2,775,076	-				-0.9
2,775,076	-				-0.9
2,775,076	-				-0.5
2,775,076	-				+0.1
2,775,076	-				+0.2
2,775,076	-				+1.2
2,775,076	-				+1.0
2,775,103	+				-0.6
2,775,103	+				-1.6
2,775,103	+				+0.4
2,775,103	+				+0.7
2,775,103	+				-1.0
2,775,103	+				-0.7
2,775,103	+				-0.6
2,775,103	+				-0.5
2,775,103	+				-0.2
2,775,103	+				+0.1
2,775,103	+				+0.5
2,775,104	-				-1.2
2,775,104	-				-0.5
2,775,104	-				+0.7
2,775,119	+		DZA65_RS12935	0.13	+0.4
2,775,119	+		DZA65_RS12935	0.13	-2.4
2,775,119	+		DZA65_RS12935	0.13	-0.4
2,775,120	-		DZA65_RS12935	0.13	+1.4
2,775,120	-		DZA65_RS12935	0.13	-0.6
2,775,120	-		DZA65_RS12935	0.13	+0.2
2,775,120	-		DZA65_RS12935	0.13	+0.5
2,775,120	-		DZA65_RS12935	0.13	-0.3
2,775,120	-		DZA65_RS12935	0.13	-0.3
2,775,120	-		DZA65_RS12935	0.13	-1.2
2,775,120	-		DZA65_RS12935	0.13	-0.3
2,775,121	+		DZA65_RS12935	0.14	+2.1
2,775,121	+		DZA65_RS12935	0.14	-0.2
2,775,121	+		DZA65_RS12935	0.14	-1.3
2,775,121	+		DZA65_RS12935	0.14	+0.2
2,775,121	+		DZA65_RS12935	0.14	-0.6
2,775,122	-		DZA65_RS12935	0.14	-0.9
2,775,122	-				-0.6
2,775,122	-		DZA65_RS12935	0.14	+0.0
2,775,122	-		DZA65_RS12935	0.14	+0.4
2,775,122	-		DZA65_RS12935	0.14	+0.1
2,775,254	+		DZA65_RS12935	0.51	+1.2
2,775,254	+		DZA65_RS12935	0.51	-0.2
2,775,255	-		DZA65_RS12935	0.51	+0.3
2,775,255	-		DZA65_RS12935	0.51	-1.8
2,775,255	-		DZA65_RS12935	0.51	-1.2
2,775,255	-		DZA65_RS12935	0.51	-0.3
2,775,255	-		DZA65_RS12935	0.51	-1.5
2,775,265	+		DZA65_RS12935	0.54	+0.9
2,775,265	+		DZA65_RS12935	0.54	-0.5
2,775,265	+		DZA65_RS12935	0.54	+0.2
2,775,265	+		DZA65_RS12935	0.54	+2.3
2,775,278	+		DZA65_RS12935	0.57	+0.7
2,775,278	+		DZA65_RS12935	0.57	-0.8
2,775,278	+		DZA65_RS12935	0.57	+0.2
2,775,279	-		DZA65_RS12935	0.57	-1.0
2,775,321	-		DZA65_RS12935	0.69	-0.1
2,775,321	-		DZA65_RS12935	0.69	-0.9
2,775,350	-		DZA65_RS12935	0.77	-1.2
2,775,403	+				+0.5
2,775,404	-				-0.2
2,775,499	+		DZA65_RS12940	0.29	+0.6
2,775,499	+		DZA65_RS12940	0.29	+0.8
2,775,499	+		DZA65_RS12940	0.29	-0.4
2,775,499	+		DZA65_RS12940	0.29	+0.6
2,775,499	+		DZA65_RS12940	0.29	-1.2
2,775,499	+		DZA65_RS12940	0.29	+0.7
2,775,499	+		DZA65_RS12940	0.29	-0.6
2,775,500	-		DZA65_RS12940	0.30	-1.9
2,775,500	-		DZA65_RS12940	0.30	-1.1
2,775,562	+		DZA65_RS12940	0.57	-0.2
2,775,562	+		DZA65_RS12940	0.57	-0.8
2,775,583	-		DZA65_RS12940	0.66	-0.3
2,775,672	+				+0.5
2,775,677	-				-0.9
2,775,677	-				+0.4
2,775,679	+				-1.4
2,775,680	-				-0.8
2,775,740	+				-1.2
2,775,740	+				-0.2
2,775,741	-				+1.2
2,775,741	-				+0.7