Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12255

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,617,176	-		DZA65_RS12245	0.52	-0.8
2,617,273	-		DZA65_RS12245	0.90	-0.7
2,617,273	-		DZA65_RS12245	0.90	-0.6
2,617,311	+				+0.0
2,617,312	-				-0.5
2,617,333	+				-0.1
2,617,333	+				+1.1
2,617,334	-				+0.6
2,617,334	-				-1.2
2,617,338	-				+0.2
2,617,346	-				-0.9
2,617,350	-				+1.5
2,617,379	+				-0.1
2,617,421	-		DZA65_RS12250	0.14	-0.0
2,617,710	+		DZA65_RS12250	0.50	+3.3
2,617,710	+		DZA65_RS12250	0.50	-0.9
2,617,710	+		DZA65_RS12250	0.50	-0.4
2,617,710	+		DZA65_RS12250	0.50	+0.0
2,617,710	+		DZA65_RS12250	0.50	+0.6
2,617,710	+		DZA65_RS12250	0.50	+0.1
2,617,710	+		DZA65_RS12250	0.50	-0.4
2,617,710	+		DZA65_RS12250	0.50	-0.7
2,617,710	+		DZA65_RS12250	0.50	+0.3
2,617,710	+		DZA65_RS12250	0.50	+3.5
2,617,711	-		DZA65_RS12250	0.50	+0.0
2,617,711	-		DZA65_RS12250	0.50	-1.7
2,617,711	-		DZA65_RS12250	0.50	+0.3
2,617,753	+		DZA65_RS12250	0.55	-1.4
2,617,753	+		DZA65_RS12250	0.55	+0.2
2,617,761	+		DZA65_RS12250	0.56	-0.4
2,617,761	+		DZA65_RS12250	0.56	-0.1
2,617,761	+		DZA65_RS12250	0.56	+0.9
2,617,761	+		DZA65_RS12250	0.56	+1.1
2,617,762	-		DZA65_RS12250	0.57	-0.9
2,617,762	-		DZA65_RS12250	0.57	-0.4
2,617,762	-		DZA65_RS12250	0.57	+0.7
2,617,762	-		DZA65_RS12250	0.57	+0.7
2,617,794	+		DZA65_RS12250	0.61	-0.8
2,617,795	-		DZA65_RS12250	0.61	-1.2
2,617,831	+		DZA65_RS12250	0.65	+1.1
2,617,831	+		DZA65_RS12250	0.65	+0.9
2,617,831	+		DZA65_RS12250	0.65	-0.2
2,617,832	-		DZA65_RS12250	0.65	+0.8
2,617,832	-		DZA65_RS12250	0.65	-0.6
2,617,832	-		DZA65_RS12250	0.65	-2.2
2,617,835	+		DZA65_RS12250	0.66	+0.3
2,617,835	+		DZA65_RS12250	0.66	-0.2
2,617,836	-		DZA65_RS12250	0.66	-0.1
2,617,836	-		DZA65_RS12250	0.66	+0.7
2,617,940	+		DZA65_RS12250	0.79	+0.4
2,617,941	-		DZA65_RS12250	0.79	-1.5
2,617,941	-		DZA65_RS12250	0.79	-0.7
2,617,961	+		DZA65_RS12250	0.81	-0.4
2,617,961	+		DZA65_RS12250	0.81	-0.0
2,617,961	+		DZA65_RS12250	0.81	+0.0
2,617,961	+		DZA65_RS12250	0.81	+0.5
2,617,961	+		DZA65_RS12250	0.81	-0.5
2,617,961	+		DZA65_RS12250	0.81	-0.3
2,617,961	+		DZA65_RS12250	0.81	-0.7
2,617,961	+		DZA65_RS12250	0.81	-0.7
2,617,961	+		DZA65_RS12250	0.81	-0.6
2,617,962	-		DZA65_RS12250	0.81	-0.4
2,617,962	-		DZA65_RS12250	0.81	+0.1
2,617,962	-		DZA65_RS12250	0.81	-0.3
2,617,962	-		DZA65_RS12250	0.81	+0.5
2,617,962	-		DZA65_RS12250	0.81	-1.5
2,617,962	-		DZA65_RS12250	0.81	+0.8
2,617,962	-		DZA65_RS12250	0.81	+0.8
2,617,962	-				-0.7
2,618,016	-		DZA65_RS12250	0.88	-0.9
2,618,016	-		DZA65_RS12250	0.88	-0.7
2,618,127	+				+1.5
2,618,128	-				+1.3
2,618,128	-				+0.0
2,618,128	-				-0.3
2,618,128	-				-0.3
2,618,128	-				+0.3
2,618,128	-				+2.3
2,618,128	-				-0.2
2,618,128	-				-1.8
2,618,136	+				+1.1
2,618,251	+				-1.7
2,618,252	-				-0.1
2,618,252	-				-0.7
2,618,252	-				+0.1
2,618,309	-		DZA65_RS12255	0.14	+0.3
2,618,309	-		DZA65_RS12255	0.14	-1.4
2,618,467	-		DZA65_RS12255	0.29	-0.9
2,618,635	+		DZA65_RS12255	0.45	-0.7
2,618,635	+		DZA65_RS12255	0.45	-0.8
2,618,635	+		DZA65_RS12255	0.45	-1.1
2,618,636	-		DZA65_RS12255	0.45	+0.1
2,618,636	-		DZA65_RS12255	0.45	+0.0
2,618,636	-		DZA65_RS12255	0.45	-0.5
2,618,659	-		DZA65_RS12255	0.47	+0.1
2,618,776	-		DZA65_RS12255	0.58	-0.8
2,618,865	-		DZA65_RS12255	0.66	-0.7
2,619,112	-		DZA65_RS12255	0.89	-0.2
2,619,112	-		DZA65_RS12255	0.89	+0.1
2,619,132	+				+2.5
2,619,132	+				-1.4
2,619,132	+				+2.0
2,619,132	+				-0.3
2,619,133	-				-0.2
2,619,133	-				-0.0
2,619,133	-				-0.1
2,619,133	-				-0.2
2,619,133	-				+5.0
2,619,133	-				-0.5
2,619,133	-				+1.1
2,619,133	-				+0.3
2,619,133	-				-0.7
2,619,133	-				+0.7
2,619,133	-				+0.3
2,619,146	+				+0.0
2,619,146	+				+0.2
2,619,147	-				+1.7
2,619,147	-				-0.4
2,619,181	+				+0.8
2,619,182	-				-0.2
2,619,262	-				-1.2
2,619,278	+				-0.1
2,619,279	-				-0.3
2,619,295	+				-0.2
2,619,295	+				+2.7
2,619,295	+				-0.5
2,619,295	+				-2.5
2,619,296	-				+0.9
2,619,296	-				+0.9
2,619,320	-				-0.1
2,619,379	+				+1.3
2,619,379	+				+0.7
2,619,380	-				-0.2
2,619,380	-				+0.3
2,619,380	-				-1.7
2,619,380	-				-1.2
2,619,380	-				-1.1
2,619,380	-				-0.4
2,619,380	-				+1.9
2,619,380	-				+0.1
2,619,380	-				+0.1
2,619,400	+				+1.5
2,619,400	+				-0.3
2,619,401	-				+0.8
2,619,462	+				+0.5
2,619,462	+				+0.3
2,619,463	-				+1.7
2,619,463	-				+0.2
2,619,463	-				+0.3
2,619,463	-				-1.1
2,619,545	-				+0.0
2,619,644	-		DZA65_RS12260	0.15	-1.1
2,619,644	-		DZA65_RS12260	0.15	+0.7
2,619,653	-		DZA65_RS12260	0.15	+0.8
2,619,653	-		DZA65_RS12260	0.15	+0.7
2,619,757	+		DZA65_RS12260	0.24	+0.8
2,619,757	+		DZA65_RS12260	0.24	+0.7
2,619,758	-		DZA65_RS12260	0.24	-0.2
2,619,796	+		DZA65_RS12260	0.27	-1.1
2,619,796	+		DZA65_RS12260	0.27	+0.5
2,619,797	-		DZA65_RS12260	0.27	-1.1
2,619,797	-		DZA65_RS12260	0.27	+1.7
2,619,797	-		DZA65_RS12260	0.27	+0.9
2,619,797	-		DZA65_RS12260	0.27	+2.9
2,619,808	+		DZA65_RS12260	0.28	+0.3
2,619,865	+		DZA65_RS12260	0.33	-1.2
2,619,946	+		DZA65_RS12260	0.39	-0.5
2,619,946	+		DZA65_RS12260	0.39	-1.7
2,619,947	-		DZA65_RS12260	0.39	+0.3
2,619,947	-		DZA65_RS12260	0.39	-0.7
2,619,979	+		DZA65_RS12260	0.42	-0.4
2,619,979	+		DZA65_RS12260	0.42	-2.4
2,619,979	+		DZA65_RS12260	0.42	-2.5
2,619,979	+		DZA65_RS12260	0.42	-0.1
2,619,979	+		DZA65_RS12260	0.42	-0.3
2,619,979	+		DZA65_RS12260	0.42	-1.0
2,619,980	-		DZA65_RS12260	0.42	-0.5
2,619,980	-		DZA65_RS12260	0.42	-1.0
2,619,980	-		DZA65_RS12260	0.42	-0.8
2,619,980	-		DZA65_RS12260	0.42	+0.1
2,619,980	-		DZA65_RS12260	0.42	+0.0
2,619,982	+		DZA65_RS12260	0.42	+0.8
2,619,982	+		DZA65_RS12260	0.42	-2.5
2,619,982	+		DZA65_RS12260	0.42	+1.1
2,619,982	+		DZA65_RS12260	0.42	+0.6
2,619,983	-		DZA65_RS12260	0.42	+0.0
2,619,983	-		DZA65_RS12260	0.42	-1.0
2,619,983	-		DZA65_RS12260	0.42	-1.2
2,619,983	-		DZA65_RS12260	0.42	-0.2
2,619,983	-		DZA65_RS12260	0.42	+0.5
2,619,983	-		DZA65_RS12260	0.42	+0.1
2,619,983	-		DZA65_RS12260	0.42	-1.2
2,619,983	-		DZA65_RS12260	0.42	-1.7
2,619,983	-		DZA65_RS12260	0.42	+1.1
2,619,983	-		DZA65_RS12260	0.42	+0.3
2,619,983	-		DZA65_RS12260	0.42	+0.8
2,619,983	-		DZA65_RS12260	0.42	+0.6
2,620,032	+		DZA65_RS12260	0.46	-0.2
2,620,032	+		DZA65_RS12260	0.46	-0.1
2,620,033	-		DZA65_RS12260	0.46	-0.2
2,620,033	-		DZA65_RS12260	0.46	-0.2
2,620,033	-		DZA65_RS12260	0.46	-0.3
2,620,082	+		DZA65_RS12260	0.50	-0.2
2,620,112	+		DZA65_RS12260	0.53	+1.5
2,620,122	-		DZA65_RS12260	0.54	-1.3