Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12145

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,593,821	+		DZA65_RS12140	0.62	+0.9
2,593,821	+		DZA65_RS12140	0.62	+1.7
2,593,821	+		DZA65_RS12140	0.62	+1.0
2,593,821	+		DZA65_RS12140	0.62	-0.3
2,593,821	+		DZA65_RS12140	0.62	+0.6
2,593,821	+		DZA65_RS12140	0.62	+1.4
2,593,821	+		DZA65_RS12140	0.62	+0.3
2,593,821	+		DZA65_RS12140	0.62	+0.7
2,593,822	-		DZA65_RS12140	0.62	+1.1
2,593,822	-		DZA65_RS12140	0.62	-0.0
2,593,822	-		DZA65_RS12140	0.62	-0.5
2,593,822	-		DZA65_RS12140	0.62	+0.1
2,593,822	-		DZA65_RS12140	0.62	-0.3
2,593,822	-				-0.3
2,593,822	-		DZA65_RS12140	0.62	+0.7
2,593,822	-		DZA65_RS12140	0.62	-2.5
2,593,822	-		DZA65_RS12140	0.62	-0.4
2,593,822	-		DZA65_RS12140	0.62	-0.2
2,593,822	-		DZA65_RS12140	0.62	+1.8
2,593,822	-		DZA65_RS12140	0.62	+0.4
2,593,822	-		DZA65_RS12140	0.62	+0.6
2,593,825	+		DZA65_RS12140	0.62	+0.6
2,593,826	-		DZA65_RS12140	0.62	+0.7
2,593,826	-		DZA65_RS12140	0.62	-0.4
2,593,826	-		DZA65_RS12140	0.62	-0.7
2,593,832	+		DZA65_RS12140	0.63	+0.3
2,593,837	+		DZA65_RS12140	0.63	+1.8
2,593,837	+		DZA65_RS12140	0.63	+0.0
2,593,837	+		DZA65_RS12140	0.63	-2.0
2,593,838	-		DZA65_RS12140	0.63	-0.9
2,593,838	-		DZA65_RS12140	0.63	-1.3
2,593,872	+		DZA65_RS12140	0.64	+0.3
2,593,872	+		DZA65_RS12140	0.64	-0.3
2,593,872	+		DZA65_RS12140	0.64	-1.3
2,593,913	+		DZA65_RS12140	0.66	+0.0
2,593,914	-		DZA65_RS12140	0.66	-1.7
2,593,959	+		DZA65_RS12140	0.68	+0.8
2,593,959	+		DZA65_RS12140	0.68	+0.3
2,593,960	-		DZA65_RS12140	0.68	+1.9
2,593,996	+		DZA65_RS12140	0.69	-0.5
2,593,996	+				-0.3
2,593,997	-		DZA65_RS12140	0.69	-0.7
2,593,997	-		DZA65_RS12140	0.69	+1.5
2,593,997	-		DZA65_RS12140	0.69	-0.5
2,594,065	+		DZA65_RS12140	0.72	+0.1
2,594,066	-		DZA65_RS12140	0.72	-1.0
2,594,096	-		DZA65_RS12140	0.73	-2.3
2,594,106	+		DZA65_RS12140	0.73	+1.2
2,594,107	-		DZA65_RS12140	0.73	+0.6
2,594,120	+		DZA65_RS12140	0.74	-1.3
2,594,120	+		DZA65_RS12140	0.74	+0.3
2,594,133	+		DZA65_RS12140	0.74	-0.4
2,594,133	+		DZA65_RS12140	0.74	-0.3
2,594,194	-		DZA65_RS12140	0.77	+0.0
2,594,194	-		DZA65_RS12140	0.77	-0.3
2,594,235	-		DZA65_RS12140	0.78	-0.2
2,594,274	+		DZA65_RS12140	0.80	-0.4
2,594,275	-		DZA65_RS12140	0.80	-0.1
2,594,310	+		DZA65_RS12140	0.81	-1.8
2,594,310	+		DZA65_RS12140	0.81	-3.4
2,594,311	-		DZA65_RS12140	0.81	-0.4
2,594,311	-		DZA65_RS12140	0.81	+0.4
2,594,318	-		DZA65_RS12140	0.81	+0.9
2,594,415	+		DZA65_RS12140	0.85	-2.5
2,594,415	+		DZA65_RS12140	0.85	-0.0
2,594,416	-		DZA65_RS12140	0.85	-1.1
2,594,416	-		DZA65_RS12140	0.85	-1.7
2,594,416	-		DZA65_RS12140	0.85	-0.1
2,594,416	-		DZA65_RS12140	0.85	-0.5
2,594,461	+		DZA65_RS12140	0.87	-2.1
2,594,461	+		DZA65_RS12140	0.87	-0.2
2,594,461	+		DZA65_RS12140	0.87	+0.6
2,594,462	-		DZA65_RS12140	0.87	-0.7
2,594,462	-		DZA65_RS12140	0.87	-0.6
2,594,462	-		DZA65_RS12140	0.87	-1.0
2,594,462	-		DZA65_RS12140	0.87	+0.5
2,594,462	-		DZA65_RS12140	0.87	-1.8
2,594,611	+				+1.1
2,594,611	+				-0.5
2,594,611	+				-0.4
2,594,612	-				-2.8
2,594,612	-				-2.8
2,594,612	-				+0.0
2,594,631	+				-0.1
2,594,631	+				+0.1
2,594,631	+				+0.3
2,594,632	-				+0.3
2,594,701	+				+0.1
2,594,702	-				-1.1
2,594,713	+				-1.1
2,594,793	+				-0.4
2,594,793	+				+2.1
2,594,794	-				+0.2
2,594,794	-				+0.4
2,594,819	-				-0.1
2,594,822	+				-2.2
2,594,823	-				-0.9
2,594,823	-				-0.1
2,594,844	+				+1.1
2,594,857	+				+0.2
2,594,858	-				-0.7
2,594,858	-				-0.3
2,594,858	-				+0.3
2,594,860	-				-1.2
2,594,907	-				+0.6
2,594,977	+				+0.6
2,595,079	+		DZA65_RS12145	0.11	+0.3
2,595,090	-		DZA65_RS12145	0.11	+0.7
2,595,135	+		DZA65_RS12145	0.13	-0.4
2,595,137	+		DZA65_RS12145	0.13	-0.7
2,595,277	+		DZA65_RS12145	0.19	+0.8
2,595,286	+		DZA65_RS12145	0.19	-0.3
2,595,292	+		DZA65_RS12145	0.19	+0.4
2,595,293	-		DZA65_RS12145	0.19	-0.7
2,595,313	+		DZA65_RS12145	0.20	-1.4
2,595,314	-		DZA65_RS12145	0.20	-1.2
2,595,385	+		DZA65_RS12145	0.23	+0.3
2,595,386	-		DZA65_RS12145	0.23	+0.7
2,595,386	-		DZA65_RS12145	0.23	-2.2
2,595,387	+		DZA65_RS12145	0.23	+1.1
2,595,387	+				-2.0
2,595,388	-		DZA65_RS12145	0.23	+0.9
2,595,388	-		DZA65_RS12145	0.23	-2.0
2,595,466	+		DZA65_RS12145	0.26	+1.5
2,595,467	-		DZA65_RS12145	0.26	-1.5
2,595,482	+		DZA65_RS12145	0.26	+0.8
2,595,554	-		DZA65_RS12145	0.29	+0.2
2,595,573	-		DZA65_RS12145	0.30	+0.8
2,595,914	+		DZA65_RS12145	0.43	+0.3
2,595,915	-		DZA65_RS12145	0.43	+1.0
2,595,926	+		DZA65_RS12145	0.44	-0.3
2,595,946	+		DZA65_RS12145	0.45	+0.5
2,595,980	-		DZA65_RS12145	0.46	-2.0
2,596,047	-		DZA65_RS12145	0.48	-1.2
2,596,089	+		DZA65_RS12145	0.50	+0.7
2,596,089	+		DZA65_RS12145	0.50	+1.9
2,596,092	+		DZA65_RS12145	0.50	-0.6
2,596,093	-		DZA65_RS12145	0.50	+1.3
2,596,173	+		DZA65_RS12145	0.53	+1.0
2,596,173	+		DZA65_RS12145	0.53	+0.1
2,596,174	-		DZA65_RS12145	0.53	+0.1
2,596,174	-		DZA65_RS12145	0.53	-1.5
2,596,174	-		DZA65_RS12145	0.53	+0.4
2,596,174	-		DZA65_RS12145	0.53	-0.1
2,596,179	+		DZA65_RS12145	0.54	-1.1
2,596,179	+		DZA65_RS12145	0.54	+0.0
2,596,180	-		DZA65_RS12145	0.54	-2.0
2,596,180	-		DZA65_RS12145	0.54	+1.0
2,596,180	-		DZA65_RS12145	0.54	-2.9
2,596,180	-		DZA65_RS12145	0.54	-1.0
2,596,180	-		DZA65_RS12145	0.54	+1.7
2,596,234	+		DZA65_RS12145	0.56	-1.2
2,596,247	+		DZA65_RS12145	0.56	-0.1
2,596,247	+		DZA65_RS12145	0.56	+0.6
2,596,247	+		DZA65_RS12145	0.56	-1.1
2,596,248	-		DZA65_RS12145	0.56	-0.7
2,596,248	-		DZA65_RS12145	0.56	-0.8
2,596,261	+		DZA65_RS12145	0.57	-0.3
2,596,262	-		DZA65_RS12145	0.57	-1.2
2,596,262	-		DZA65_RS12145	0.57	+0.9
2,596,348	+		DZA65_RS12145	0.60	+0.3
2,596,348	+		DZA65_RS12145	0.60	+0.3
2,596,367	-		DZA65_RS12145	0.61	-0.8
2,596,377	+		DZA65_RS12145	0.61	+0.7
2,596,378	-		DZA65_RS12145	0.61	+0.9
2,596,378	-		DZA65_RS12145	0.61	+0.3
2,596,391	-		DZA65_RS12145	0.62	-0.5
2,596,404	+		DZA65_RS12145	0.62	+0.3
2,596,413	+		DZA65_RS12145	0.63	+0.2
2,596,413	+		DZA65_RS12145	0.63	+1.6
2,596,413	+		DZA65_RS12145	0.63	-0.6
2,596,413	+		DZA65_RS12145	0.63	-1.0
2,596,413	+		DZA65_RS12145	0.63	-1.2
2,596,414	-		DZA65_RS12145	0.63	+0.3
2,596,414	-		DZA65_RS12145	0.63	+0.0
2,596,414	-		DZA65_RS12145	0.63	-0.3
2,596,414	-		DZA65_RS12145	0.63	-0.7
2,596,420	+		DZA65_RS12145	0.63	+1.2
2,596,482	-		DZA65_RS12145	0.65	-0.7
2,596,521	+		DZA65_RS12145	0.67	-2.1
2,596,521	+		DZA65_RS12145	0.67	+1.3
2,596,589	+		DZA65_RS12145	0.70	-0.8
2,596,766	+		DZA65_RS12145	0.76	+0.3
2,596,800	+		DZA65_RS12145	0.78	+1.9
2,596,838	-		DZA65_RS12145	0.79	-0.2
2,596,853	+		DZA65_RS12145	0.80	+0.7
2,596,853	+		DZA65_RS12145	0.80	+1.2
2,596,854	-		DZA65_RS12145	0.80	-0.3
2,596,854	-		DZA65_RS12145	0.80	-1.1
2,596,911	+		DZA65_RS12145	0.82	+0.3
2,596,974	+		DZA65_RS12145	0.85	-0.2
2,596,974	+		DZA65_RS12145	0.85	-0.5
2,596,974	+		DZA65_RS12145	0.85	+0.8
2,596,974	+		DZA65_RS12145	0.85	-0.1
2,596,975	-		DZA65_RS12145	0.85	+1.3
2,596,975	-		DZA65_RS12145	0.85	+0.6
2,596,975	-		DZA65_RS12145	0.85	+0.3
2,596,976	+		DZA65_RS12145	0.85	+0.8
2,596,976	+		DZA65_RS12145	0.85	-0.5
2,596,976	+		DZA65_RS12145	0.85	-1.4
2,596,976	+		DZA65_RS12145	0.85	+0.1
2,596,976	+		DZA65_RS12145	0.85	+0.3
2,596,976	+		DZA65_RS12145	0.85	-1.5
2,596,976	+		DZA65_RS12145	0.85	-0.3
2,596,976	+		DZA65_RS12145	0.85	+0.9
2,596,977	-		DZA65_RS12145	0.85	-0.5
2,596,977	-		DZA65_RS12145	0.85	+0.6
2,596,977	-		DZA65_RS12145	0.85	+0.2
2,596,977	-				-0.2
2,597,012	+		DZA65_RS12145	0.86	-0.0
2,597,012	+		DZA65_RS12145	0.86	+0.0
2,597,014	+		DZA65_RS12145	0.86	-0.1
2,597,014	+		DZA65_RS12145	0.86	+1.3
2,597,014	+		DZA65_RS12145	0.86	-0.8
2,597,015	-		DZA65_RS12145	0.86	-2.7
2,597,021	+		DZA65_RS12145	0.86	+0.1
2,597,021	+		DZA65_RS12145	0.86	-0.8
2,597,021	+		DZA65_RS12145	0.86	-3.2
2,597,022	-		DZA65_RS12145	0.86	-0.0
2,597,045	-		DZA65_RS12145	0.87	+0.0
2,597,056	+		DZA65_RS12145	0.88	-1.7
2,597,057	-		DZA65_RS12145	0.88	-0.8
2,597,057	-		DZA65_RS12145	0.88	-0.3
2,597,057	-		DZA65_RS12145	0.88	+0.5
2,597,057	-		DZA65_RS12145	0.88	-1.7
2,597,057	-		DZA65_RS12145	0.88	+0.3
2,597,150	-				+0.3
2,597,150	-				+0.3
2,597,166	+				-0.8
2,597,167	-				+1.0
2,597,218	+				+0.9
2,597,219	-				-0.7
2,597,220	+				-0.2
2,597,221	-				+1.8
2,597,331	+				+0.8
2,597,479	+				-0.7
2,597,518	+				-2.2
2,597,518	+				-0.7
2,597,519	-				-1.8
2,597,539	+				+1.0
2,597,539	+				-1.5
2,597,540	-				+0.9
2,597,540	-				+0.4
2,597,540	-				+0.0
2,597,694	-		DZA65_RS12150	0.15	-0.7
2,597,694	-		DZA65_RS12150	0.15	+0.5
2,597,836	+		DZA65_RS12150	0.28	+0.7
2,597,836	+		DZA65_RS12150	0.28	+1.5
2,597,956	+		DZA65_RS12150	0.40	+0.0
2,597,996	-		DZA65_RS12150	0.44	-1.2
2,598,007	+		DZA65_RS12150	0.45	+0.6
2,598,008	-		DZA65_RS12150	0.45	+1.1
2,598,008	-		DZA65_RS12150	0.45	-0.2
2,598,084	-		DZA65_RS12150	0.52	-0.9
2,598,101	+		DZA65_RS12150	0.54	-0.5
2,598,101	+		DZA65_RS12150	0.54	-0.9
2,598,101	+		DZA65_RS12150	0.54	-0.5
2,598,102	-		DZA65_RS12150	0.54	-1.2
2,598,102	-		DZA65_RS12150	0.54	-0.1
2,598,220	+		DZA65_RS12150	0.65	-0.7
2,598,267	-		DZA65_RS12150	0.69	+0.5
2,598,290	-		DZA65_RS12150	0.72	+0.0
2,598,290	-		DZA65_RS12150	0.72	-0.7
2,598,327	+		DZA65_RS12150	0.75	+0.0
2,598,327	+		DZA65_RS12150	0.75	-1.2
2,598,328	-		DZA65_RS12150	0.75	+1.0
2,598,328	-		DZA65_RS12150	0.75	+0.2
2,598,328	-		DZA65_RS12150	0.75	+0.3
2,598,328	-		DZA65_RS12150	0.75	-1.0