Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07930

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,655,962	+		DZA65_RS07925	0.57	+1.5
1,655,982	-		DZA65_RS07925	0.58	-0.7
1,655,982	-		DZA65_RS07925	0.58	-1.3
1,656,020	+		DZA65_RS07925	0.61	+1.3
1,656,020	+		DZA65_RS07925	0.61	-1.5
1,656,021	-		DZA65_RS07925	0.61	+0.2
1,656,021	-		DZA65_RS07925	0.61	-0.5
1,656,021	-		DZA65_RS07925	0.61	+3.5
1,656,021	-		DZA65_RS07925	0.61	-0.1
1,656,024	+		DZA65_RS07925	0.61	-0.8
1,656,024	+		DZA65_RS07925	0.61	-0.0
1,656,024	+				-0.1
1,656,024	+		DZA65_RS07925	0.61	+0.0
1,656,024	+		DZA65_RS07925	0.61	-0.5
1,656,024	+		DZA65_RS07925	0.61	-2.3
1,656,024	+		DZA65_RS07925	0.61	+0.9
1,656,025	-		DZA65_RS07925	0.61	+0.0
1,656,025	-		DZA65_RS07925	0.61	+2.1
1,656,025	-		DZA65_RS07925	0.61	-1.0
1,656,025	-		DZA65_RS07925	0.61	-1.8
1,656,025	-				-0.5
1,656,038	+		DZA65_RS07925	0.62	-0.5
1,656,038	+		DZA65_RS07925	0.62	+0.7
1,656,039	-		DZA65_RS07925	0.62	+1.3
1,656,081	+		DZA65_RS07925	0.65	+1.2
1,656,118	-		DZA65_RS07925	0.67	-0.5
1,656,118	-		DZA65_RS07925	0.67	-0.1
1,656,118	-		DZA65_RS07925	0.67	-0.5
1,656,118	-		DZA65_RS07925	0.67	+0.3
1,656,118	-		DZA65_RS07925	0.67	+0.0
1,656,233	+		DZA65_RS07925	0.75	-1.8
1,656,234	-		DZA65_RS07925	0.75	-2.2
1,656,236	+		DZA65_RS07925	0.76	+1.0
1,656,237	-		DZA65_RS07925	0.76	-0.4
1,656,237	-		DZA65_RS07925	0.76	+2.0
1,656,440	+		DZA65_RS07925	0.90	-2.1
1,656,441	-		DZA65_RS07925	0.90	+0.0
1,656,469	+				+0.5
1,656,469	+				-0.5
1,656,469	+				-1.5
1,656,469	+				-0.2
1,656,470	-				-1.0
1,656,470	-				-1.8
1,656,470	-				+0.7
1,656,470	-				-0.4
1,656,470	-				+0.7
1,656,470	-				+1.0
1,656,470	-				-0.9
1,656,551	+				-0.2
1,656,551	+				-0.2
1,656,551	+				-0.3
1,656,551	+				+0.1
1,656,551	+				-0.5
1,656,551	+				+2.2
1,656,552	-				-0.7
1,656,558	+				+0.3
1,656,559	-				-0.2
1,656,559	-				-1.9
1,656,686	+				+0.4
1,656,687	-				+0.5
1,656,687	-				+0.2
1,656,687	-				-0.8
1,656,689	+				-0.2
1,656,690	-				+0.1
1,656,739	+				-0.7
1,656,762	+				+0.7
1,656,762	+				+0.0
1,656,762	+				-0.9
1,656,762	+				-0.8
1,656,763	-				+0.3
1,656,763	-				-0.9
1,656,763	-				-0.9
1,656,763	-				+0.1
1,656,763	-				-2.3
1,656,763	-				+0.1
1,656,765	-				-1.2
1,656,765	-				-1.1
1,656,777	-				+0.2
1,656,794	+				-0.5
1,656,849	+				-0.3
1,656,849	+				+0.2
1,656,850	-				-0.5
1,656,850	-				-0.8
1,656,850	-				-0.5
1,656,850	-				-1.1
1,656,851	+				-0.2
1,656,851	+				-0.9
1,656,851	+				-1.8
1,656,851	+				-1.5
1,656,851	+				-0.1
1,656,851	+				-1.0
1,656,851	+				-0.1
1,656,852	-				+1.8
1,656,852	-				+0.5
1,656,852	-				+1.2
1,656,852	-				-0.2
1,656,852	-				-0.3
1,656,858	+				-2.0
1,656,858	+				+0.4
1,656,858	+				-1.1
1,656,859	-				+0.5
1,656,859	-				-0.9
1,656,862	+				+0.6
1,656,862	+				-0.2
1,656,863	-				-0.5
1,656,935	+				-0.3
1,656,935	+				-1.0
1,656,936	-				-0.1
1,656,966	+				-0.2
1,656,966	+				-0.1
1,656,966	+				+0.7
1,656,967	-				+0.1
1,656,967	-				-3.0
1,656,967	-				+0.4
1,657,036	+				-1.1
1,657,037	-				+0.3
1,657,037	-				-0.2
1,657,060	+		DZA65_RS07930	0.11	-0.8
1,657,091	-		DZA65_RS07930	0.13	+0.4
1,657,091	-		DZA65_RS07930	0.13	-1.5
1,657,100	+		DZA65_RS07930	0.14	-1.5
1,657,101	-		DZA65_RS07930	0.14	-1.0
1,657,153	+		DZA65_RS07930	0.18	-1.1
1,657,153	+		DZA65_RS07930	0.18	-1.3
1,657,154	-		DZA65_RS07930	0.18	-1.1
1,657,175	-		DZA65_RS07930	0.19	+1.7
1,657,179	+		DZA65_RS07930	0.19	-0.7
1,657,179	+		DZA65_RS07930	0.19	-1.8
1,657,180	-		DZA65_RS07930	0.19	-1.8
1,657,180	-		DZA65_RS07930	0.19	+0.1
1,657,207	-		DZA65_RS07930	0.21	-1.8
1,657,236	-		DZA65_RS07930	0.23	-0.9
1,657,312	-		DZA65_RS07930	0.29	-0.5
1,657,330	+		DZA65_RS07930	0.30	+0.1
1,657,330	+		DZA65_RS07930	0.30	-1.5
1,657,330	+		DZA65_RS07930	0.30	-1.3
1,657,330	+		DZA65_RS07930	0.30	-0.6
1,657,331	-		DZA65_RS07930	0.30	+0.7
1,657,342	-		DZA65_RS07930	0.31	+0.2
1,657,393	+		DZA65_RS07930	0.34	-0.5
1,657,394	-		DZA65_RS07930	0.35	-2.1
1,657,660	+		DZA65_RS07930	0.53	-0.7
1,657,660	+		DZA65_RS07930	0.53	+4.2
1,657,660	+		DZA65_RS07930	0.53	-1.8
1,657,660	+		DZA65_RS07930	0.53	+0.2
1,657,768	+		DZA65_RS07930	0.61	+0.2
1,657,768	+		DZA65_RS07930	0.61	-0.1
1,657,769	-		DZA65_RS07930	0.61	+1.5
1,657,769	-		DZA65_RS07930	0.61	-0.2
1,657,865	+		DZA65_RS07930	0.68	-0.2
1,657,866	-		DZA65_RS07930	0.68	-0.3
1,657,890	+		DZA65_RS07930	0.69	-0.5
1,657,890	+		DZA65_RS07930	0.69	+0.7
1,657,890	+		DZA65_RS07930	0.69	-1.9
1,658,225	+				-0.9
1,658,225	+				-0.1
1,658,226	-				+0.7
1,658,226	-				+0.7
1,658,290	-				+0.5
1,658,298	+				-0.3
1,658,301	+				+1.0
1,658,302	-				-1.3
1,658,366	-				+0.2
1,658,559	+				-0.7
1,658,635	+				+0.5
1,658,718	-				-0.5
1,658,718	-				-0.3
1,658,718	-				+0.1
1,658,773	+				-0.9
1,658,777	-				-1.8
1,658,930	+		DZA65_RS07935	0.31	-0.5
1,658,942	+		DZA65_RS07935	0.32	-2.3
1,658,942	+		DZA65_RS07935	0.32	-0.6
1,658,942	+		DZA65_RS07935	0.32	+0.8
1,658,942	+		DZA65_RS07935	0.32	+0.6
1,658,942	+		DZA65_RS07935	0.32	-0.1
1,658,943	-		DZA65_RS07935	0.33	-0.5
1,658,948	+		DZA65_RS07935	0.33	-0.7
1,658,949	-		DZA65_RS07935	0.33	-1.8
1,658,976	+		DZA65_RS07935	0.38	-0.2
1,658,976	+		DZA65_RS07935	0.38	+0.2
1,658,976	+		DZA65_RS07935	0.38	+0.8
1,658,976	+		DZA65_RS07935	0.38	+0.5
1,658,976	+		DZA65_RS07935	0.38	-2.5
1,658,977	-		DZA65_RS07935	0.38	+0.4
1,658,978	+		DZA65_RS07935	0.38	-0.7
1,658,979	-		DZA65_RS07935	0.38	-1.8
1,658,979	-		DZA65_RS07935	0.38	+0.1
1,658,979	-		DZA65_RS07935	0.38	+2.5
1,658,979	-		DZA65_RS07935	0.38	-1.1
1,659,019	-		DZA65_RS07935	0.44	+1.2
1,659,020	+		DZA65_RS07935	0.44	-0.6
1,659,033	-		DZA65_RS07935	0.47	+0.2
1,659,059	+		DZA65_RS07935	0.51	-1.1
1,659,065	+		DZA65_RS07935	0.51	-0.2
1,659,100	+		DZA65_RS07935	0.57	-2.7
1,659,173	+		DZA65_RS07935	0.68	+2.2
1,659,173	+		DZA65_RS07935	0.68	+0.5
1,659,173	+		DZA65_RS07935	0.68	-0.4
1,659,174	-		DZA65_RS07935	0.68	-0.5
1,659,174	-		DZA65_RS07935	0.68	-1.3
1,659,174	-				+0.5
1,659,174	-		DZA65_RS07935	0.68	+0.8
1,659,174	-		DZA65_RS07935	0.68	-1.2
1,659,179	+		DZA65_RS07935	0.69	+1.7
1,659,179	+		DZA65_RS07935	0.69	-1.5
1,659,180	-		DZA65_RS07935	0.69	-0.5
1,659,203	+		DZA65_RS07935	0.73	-1.1
1,659,233	+		DZA65_RS07935	0.78	-0.3
1,659,305	+		DZA65_RS07935	0.89	+2.1
1,659,309	+		DZA65_RS07935	0.89	+0.1
1,659,309	+		DZA65_RS07935	0.89	+1.3
1,659,310	-		DZA65_RS07935	0.89	-0.8
1,659,310	-		DZA65_RS07935	0.89	-0.2
1,659,310	-		DZA65_RS07935	0.89	-0.2
1,659,310	-		DZA65_RS07935	0.89	+0.5
1,659,310	-		DZA65_RS07935	0.89	-0.2
1,659,312	-		DZA65_RS07935	0.90	+0.2
1,659,312	-		DZA65_RS07935	0.90	+0.8
1,659,313	+				+0.5