Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05670

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,165,958	+				+0.3
1,166,034	+				-0.9
1,166,034	+				-0.9
1,166,035	-				+0.1
1,166,035	-				-0.9
1,166,078	+				-0.9
1,166,078	+				+0.3
1,166,079	-				+1.0
1,166,082	+				-0.4
1,166,083	-				+0.2
1,166,083	-				+0.1
1,166,083	-				-0.1
1,166,155	+				+0.7
1,166,169	+				-1.1
1,166,214	+				+0.7
1,166,381	+				-0.6
1,166,386	-				-1.6
1,166,387	+				+0.7
1,166,397	-				-0.7
1,166,404	+				+0.5
1,166,518	+				-0.9
1,166,519	-				-0.5
1,166,545	-				+0.7
1,166,618	-				+2.1
1,166,629	-				-0.6
1,166,799	+				-0.3
1,166,799	+				-0.9
1,166,818	+				+0.2
1,166,818	+				+1.2
1,166,819	-				-0.6
1,166,819	-				-0.1
1,166,819	-				-0.8
1,166,819	-				+0.7
1,166,819	-				-0.0
1,166,819	-				+1.5
1,166,819	-				+0.1
1,166,822	+				-2.6
1,166,822	+				-0.7
1,166,822	+				-1.5
1,166,822	+				+0.0
1,166,822	+				-1.1
1,166,823	-				-0.6
1,166,823	-				+0.1
1,166,823	-				+0.5
1,166,823	-				+0.3
1,166,823	-				+0.6
1,166,823	-				-0.8
1,166,823	-				+3.5
1,166,823	-				+0.5
1,166,823	-				+0.7
1,166,823	-				-1.3
1,166,823	-				-0.0
1,166,823	-				-2.3
1,166,871	-				+0.7
1,166,871	-				-1.1
1,166,888	+				-0.5
1,166,888	+				+1.9
1,166,888	+				-1.1
1,166,889	-				-0.9
1,166,889	-				-0.9
1,166,889	-				-0.3
1,166,889	-				-1.6
1,166,889	-				-2.1
1,166,890	+				+0.4
1,166,890	+				+0.1
1,166,891	-				-0.2
1,166,891	-				-0.5
1,166,892	+				+1.3
1,166,892	+				+0.2
1,166,893	-				+0.9
1,166,893	-				-0.1
1,166,937	+				+1.2
1,167,003	-				+1.4
1,167,042	+		DZA65_RS05670	0.13	-2.6
1,167,043	-		DZA65_RS05670	0.13	+0.0
1,167,081	+		DZA65_RS05670	0.17	+0.2
1,167,089	+		DZA65_RS05670	0.18	-0.6
1,167,090	-		DZA65_RS05670	0.18	+0.6
1,167,116	+		DZA65_RS05670	0.21	+1.1
1,167,116	+		DZA65_RS05670	0.21	-1.6
1,167,188	-		DZA65_RS05670	0.28	+0.2
1,167,224	+				+2.7
1,167,225	-		DZA65_RS05670	0.31	+0.2
1,167,225	-		DZA65_RS05670	0.31	-0.3
1,167,270	+		DZA65_RS05670	0.35	-2.0
1,167,270	+		DZA65_RS05670	0.35	-0.5
1,167,271	-		DZA65_RS05670	0.36	+0.4
1,167,286	+		DZA65_RS05670	0.37	+0.9
1,167,286	+		DZA65_RS05670	0.37	-0.2
1,167,286	+		DZA65_RS05670	0.37	-1.2
1,167,287	-		DZA65_RS05670	0.37	+0.8
1,167,287	-		DZA65_RS05670	0.37	+0.3
1,167,287	-		DZA65_RS05670	0.37	-0.6
1,167,290	+		DZA65_RS05670	0.37	-2.5
1,167,290	+		DZA65_RS05670	0.37	-0.6
1,167,290	+		DZA65_RS05670	0.37	+0.5
1,167,290	+		DZA65_RS05670	0.37	-0.9
1,167,291	-		DZA65_RS05670	0.38	-0.0
1,167,335	-		DZA65_RS05670	0.42	-1.7
1,167,355	+		DZA65_RS05670	0.44	-0.5
1,167,387	+		DZA65_RS05670	0.47	+0.3
1,167,387	+		DZA65_RS05670	0.47	-1.6
1,167,387	+		DZA65_RS05670	0.47	+0.1
1,167,391	+		DZA65_RS05670	0.47	+0.4
1,167,392	-		DZA65_RS05670	0.47	-0.2
1,167,392	-		DZA65_RS05670	0.47	-0.5
1,167,392	-		DZA65_RS05670	0.47	-0.2
1,167,392	-		DZA65_RS05670	0.47	+0.7
1,167,392	-		DZA65_RS05670	0.47	+1.4
1,167,392	-		DZA65_RS05670	0.47	-0.8
1,167,392	-		DZA65_RS05670	0.47	+1.0
1,167,392	-		DZA65_RS05670	0.47	-0.1
1,167,392	-		DZA65_RS05670	0.47	-0.9
1,167,392	-		DZA65_RS05670	0.47	-0.9
1,167,405	+		DZA65_RS05670	0.49	+0.4
1,167,405	+		DZA65_RS05670	0.49	-1.1
1,167,405	+		DZA65_RS05670	0.49	+0.2
1,167,406	-		DZA65_RS05670	0.49	-2.1
1,167,406	-		DZA65_RS05670	0.49	-2.8
1,167,406	-		DZA65_RS05670	0.49	-2.3
1,167,406	-		DZA65_RS05670	0.49	+0.7
1,167,523	+		DZA65_RS05670	0.60	+0.2
1,167,523	+		DZA65_RS05670	0.60	-0.7
1,167,523	+		DZA65_RS05670	0.60	-0.3
1,167,523	+		DZA65_RS05670	0.60	-0.6
1,167,523	+		DZA65_RS05670	0.60	+0.4
1,167,523	+		DZA65_RS05670	0.60	-0.7
1,167,523	+		DZA65_RS05670	0.60	+0.7
1,167,523	+		DZA65_RS05670	0.60	-1.6
1,167,524	-		DZA65_RS05670	0.60	+0.2
1,167,524	-		DZA65_RS05670	0.60	-0.3
1,167,524	-				+0.7
1,167,524	-		DZA65_RS05670	0.60	-1.2
1,167,524	-		DZA65_RS05670	0.60	+0.7
1,167,524	-		DZA65_RS05670	0.60	+0.2
1,167,524	-		DZA65_RS05670	0.60	+0.2
1,167,524	-		DZA65_RS05670	0.60	-1.6
1,167,524	-		DZA65_RS05670	0.60	+0.1
1,167,524	-		DZA65_RS05670	0.60	+0.5
1,167,524	-		DZA65_RS05670	0.60	-0.5
1,167,524	-		DZA65_RS05670	0.60	-0.5
1,167,524	-		DZA65_RS05670	0.60	-0.9
1,167,525	+		DZA65_RS05670	0.60	+0.4
1,167,556	+		DZA65_RS05670	0.63	-1.0
1,167,717	+		DZA65_RS05670	0.79	-0.6
1,167,717	+		DZA65_RS05670	0.79	+0.9
1,167,718	-		DZA65_RS05670	0.79	-0.1
1,167,753	-		DZA65_RS05670	0.82	-0.1
1,167,807	+		DZA65_RS05670	0.88	-0.3
1,167,812	-		DZA65_RS05670	0.88	+0.1
1,167,812	-		DZA65_RS05670	0.88	-0.2
1,167,812	-		DZA65_RS05670	0.88	+1.9
1,167,883	+				-0.3
1,167,883	+				-0.0
1,167,883	+				-0.3
1,167,884	-				+0.6
1,167,884	-				+1.7
1,167,884	-				-2.1
1,167,884	-				+0.8
1,167,888	+				+0.1
1,167,888	+				+0.4
1,167,889	-				+2.5
1,167,892	-				-0.6
1,167,931	+				+0.7
1,167,932	-				+2.5
1,167,936	+				+0.4
1,167,936	+				+0.6
1,167,936	+				+0.4
1,167,936	+				-0.6
1,167,936	+				+0.9
1,167,936	+				-2.1
1,167,937	-				+0.3
1,167,937	-				-0.0
1,167,937	-				-1.0
1,167,937	-				-2.1
1,167,937	-				+0.1
1,167,937	-				+0.1
1,167,937	-				+0.8
1,167,937	-				+2.8
1,167,937	-				-0.9
1,167,937	-				-0.4
1,167,944	+				-0.3
1,167,948	+				-0.4
1,167,949	-				+0.9
1,167,949	-				-0.3
1,167,949	-				+1.4
1,167,987	+				+2.3
1,167,988	-				-1.6
1,168,034	+		DZA65_RS05675	0.14	+0.3
1,168,035	-		DZA65_RS05675	0.14	-0.2
1,168,169	-		DZA65_RS05675	0.34	+1.0
1,168,201	+		DZA65_RS05675	0.38	-0.1
1,168,201	+		DZA65_RS05675	0.38	-0.1
1,168,202	-				+1.7
1,168,202	-		DZA65_RS05675	0.39	-0.0
1,168,202	-		DZA65_RS05675	0.39	-0.4
1,168,202	-		DZA65_RS05675	0.39	-1.0
1,168,202	-		DZA65_RS05675	0.39	-1.9
1,168,269	+		DZA65_RS05675	0.48	-0.4
1,168,293	+		DZA65_RS05675	0.52	+0.1
1,168,293	+		DZA65_RS05675	0.52	-0.6
1,168,294	-		DZA65_RS05675	0.52	+1.3
1,168,334	+		DZA65_RS05675	0.58	-0.5
1,168,334	+		DZA65_RS05675	0.58	-1.5
1,168,334	+		DZA65_RS05675	0.58	-2.3
1,168,334	+		DZA65_RS05675	0.58	+0.5
1,168,335	-		DZA65_RS05675	0.58	+0.0
1,168,335	-		DZA65_RS05675	0.58	-1.3
1,168,336	+		DZA65_RS05675	0.58	-1.6
1,168,337	-		DZA65_RS05675	0.58	-1.9
1,168,337	-		DZA65_RS05675	0.58	-0.1
1,168,337	-		DZA65_RS05675	0.58	-2.9
1,168,371	+		DZA65_RS05675	0.63	-0.9
1,168,374	+		DZA65_RS05675	0.64	+0.1
1,168,375	-		DZA65_RS05675	0.64	-0.5
1,168,429	+		DZA65_RS05675	0.72	+0.4
1,168,429	+		DZA65_RS05675	0.72	+0.2
1,168,429	+		DZA65_RS05675	0.72	-0.0
1,168,429	+		DZA65_RS05675	0.72	-0.6
1,168,430	-		DZA65_RS05675	0.72	-2.2
1,168,430	-		DZA65_RS05675	0.72	-0.8
1,168,430	-		DZA65_RS05675	0.72	+1.0
1,168,430	-		DZA65_RS05675	0.72	+0.1
1,168,430	-		DZA65_RS05675	0.72	-0.6
1,168,430	-		DZA65_RS05675	0.72	-1.3
1,168,430	-		DZA65_RS05675	0.72	-0.5
1,168,440	+		DZA65_RS05675	0.73	-1.4
1,168,441	-		DZA65_RS05675	0.73	+0.7
1,168,441	-		DZA65_RS05675	0.73	+0.1
1,168,441	-		DZA65_RS05675	0.73	-0.7
1,168,489	+		DZA65_RS05675	0.80	-0.6
1,168,489	+		DZA65_RS05675	0.80	-0.1
1,168,490	-		DZA65_RS05675	0.80	-1.0
1,168,490	-		DZA65_RS05675	0.80	+1.3
1,168,573	-				-1.3
1,168,681	+				-0.7
1,168,681	+				+1.3
1,168,681	+				+0.4
1,168,682	-				-2.3
1,168,699	+				-1.0
1,168,741	+				+0.3
1,168,744	+				-0.5
1,168,745	-				+0.7
1,168,782	-				-0.1
1,168,807	-				-0.0
1,168,807	-				-1.1
1,168,807	-				+0.7
1,168,810	-				-0.8
1,168,832	+				-1.0
1,168,880	-				+1.5
1,168,922	-				+1.3
1,168,922	-				+0.4
1,168,922	-				-0.1