Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05230

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,074,865	+		DZA65_RS05225	0.60	-1.1
1,075,019	+		DZA65_RS05225	0.67	-1.3
1,075,020	-		DZA65_RS05225	0.67	-2.0
1,075,034	+		DZA65_RS05225	0.68	-1.3
1,075,034	+		DZA65_RS05225	0.68	-0.5
1,075,034	+		DZA65_RS05225	0.68	+0.3
1,075,034	+		DZA65_RS05225	0.68	-0.4
1,075,035	-		DZA65_RS05225	0.68	-0.6
1,075,035	-		DZA65_RS05225	0.68	+1.7
1,075,098	-		DZA65_RS05225	0.71	-0.6
1,075,098	-		DZA65_RS05225	0.71	+2.2
1,075,098	-		DZA65_RS05225	0.71	-1.3
1,075,098	-		DZA65_RS05225	0.71	+2.3
1,075,098	-		DZA65_RS05225	0.71	+0.7
1,075,099	+		DZA65_RS05225	0.71	+0.0
1,075,099	+		DZA65_RS05225	0.71	-0.3
1,075,100	-		DZA65_RS05225	0.71	+0.5
1,075,100	-		DZA65_RS05225	0.71	+1.2
1,075,100	-		DZA65_RS05225	0.71	+1.1
1,075,136	+		DZA65_RS05225	0.72	+0.6
1,075,136	+		DZA65_RS05225	0.72	+0.5
1,075,137	-		DZA65_RS05225	0.72	+0.3
1,075,307	+		DZA65_RS05225	0.80	-1.0
1,075,316	+		DZA65_RS05225	0.81	-0.3
1,075,316	+		DZA65_RS05225	0.81	-1.3
1,075,317	-		DZA65_RS05225	0.81	+0.5
1,075,339	+		DZA65_RS05225	0.82	-0.1
1,075,339	+		DZA65_RS05225	0.82	+0.0
1,075,339	+		DZA65_RS05225	0.82	-1.3
1,075,340	-		DZA65_RS05225	0.82	+0.9
1,075,377	-		DZA65_RS05225	0.83	-0.1
1,075,472	+		DZA65_RS05225	0.88	-0.6
1,075,472	+		DZA65_RS05225	0.88	-0.4
1,075,472	+		DZA65_RS05225	0.88	+0.5
1,075,472	+		DZA65_RS05225	0.88	-0.3
1,075,472	+		DZA65_RS05225	0.88	-2.8
1,075,472	+		DZA65_RS05225	0.88	+0.4
1,075,472	+		DZA65_RS05225	0.88	+1.0
1,075,473	-		DZA65_RS05225	0.88	-0.5
1,075,473	-		DZA65_RS05225	0.88	+0.4
1,075,473	-		DZA65_RS05225	0.88	-0.3
1,075,473	-		DZA65_RS05225	0.88	-2.1
1,075,473	-		DZA65_RS05225	0.88	-1.0
1,075,473	-		DZA65_RS05225	0.88	-0.1
1,075,473	-		DZA65_RS05225	0.88	-1.1
1,075,474	+		DZA65_RS05225	0.88	+0.4
1,075,607	+				+2.3
1,075,608	-				-0.3
1,075,608	-				+1.4
1,075,608	-				+1.0
1,075,608	-				-0.3
1,075,673	+				-0.1
1,075,673	+				-0.5
1,075,673	+				-0.4
1,075,674	-				+0.7
1,075,674	-				-0.8
1,075,674	-				-0.3
1,075,674	-				+0.7
1,075,719	+				-0.5
1,075,719	+				-2.6
1,075,719	+				-0.3
1,075,719	+				-1.7
1,075,719	+				+2.3
1,075,720	-				+0.6
1,075,720	-				-0.6
1,075,720	-				+0.1
1,075,790	+				-0.4
1,075,790	+				+1.5
1,075,791	-				+1.7
1,075,791	-				+0.4
1,075,791	-				-0.9
1,075,857	+				+2.7
1,075,858	-				-1.0
1,075,868	+				-0.3
1,075,914	+				-1.8
1,076,011	-		DZA65_RS05230	0.14	-0.8
1,076,153	+		DZA65_RS05230	0.24	-0.6
1,076,153	+		DZA65_RS05230	0.24	-0.8
1,076,153	+		DZA65_RS05230	0.24	-0.8
1,076,153	+		DZA65_RS05230	0.24	-1.6
1,076,154	-		DZA65_RS05230	0.24	-1.8
1,076,154	-		DZA65_RS05230	0.24	-0.1
1,076,154	-		DZA65_RS05230	0.24	-0.3
1,076,154	-		DZA65_RS05230	0.24	-0.8
1,076,154	-		DZA65_RS05230	0.24	-1.5
1,076,154	-		DZA65_RS05230	0.24	-0.8
1,076,208	-		DZA65_RS05230	0.28	+0.1
1,076,212	+		DZA65_RS05230	0.28	+0.3
1,076,213	-		DZA65_RS05230	0.28	-0.6
1,076,294	+		DZA65_RS05230	0.34	+1.1
1,076,295	-		DZA65_RS05230	0.34	-0.3
1,076,295	-		DZA65_RS05230	0.34	-0.6
1,076,295	-		DZA65_RS05230	0.34	-0.1
1,076,340	+		DZA65_RS05230	0.37	-1.4
1,076,359	-		DZA65_RS05230	0.38	-2.6
1,076,360	+		DZA65_RS05230	0.38	-0.3
1,076,360	+		DZA65_RS05230	0.38	+0.9
1,076,360	+		DZA65_RS05230	0.38	-0.6
1,076,360	+		DZA65_RS05230	0.38	+0.3
1,076,360	+		DZA65_RS05230	0.38	-1.0
1,076,360	+		DZA65_RS05230	0.38	+0.7
1,076,360	+		DZA65_RS05230	0.38	+0.7
1,076,360	+		DZA65_RS05230	0.38	+1.0
1,076,360	+		DZA65_RS05230	0.38	+0.0
1,076,360	+		DZA65_RS05230	0.38	+0.2
1,076,360	+		DZA65_RS05230	0.38	+1.3
1,076,360	+		DZA65_RS05230	0.38	-0.3
1,076,361	-		DZA65_RS05230	0.38	-0.4
1,076,361	-		DZA65_RS05230	0.38	+1.3
1,076,361	-		DZA65_RS05230	0.38	-0.8
1,076,361	-		DZA65_RS05230	0.38	-1.2
1,076,361	-		DZA65_RS05230	0.38	-0.8
1,076,361	-		DZA65_RS05230	0.38	-1.7
1,076,361	-		DZA65_RS05230	0.38	-0.3
1,076,415	-		DZA65_RS05230	0.42	+1.1
1,076,462	+		DZA65_RS05230	0.45	+1.2
1,076,462	+		DZA65_RS05230	0.45	+0.4
1,076,462	+		DZA65_RS05230	0.45	-1.1
1,076,463	-		DZA65_RS05230	0.45	-0.1
1,076,463	-		DZA65_RS05230	0.45	-2.1
1,076,463	-		DZA65_RS05230	0.45	+0.5
1,076,463	-		DZA65_RS05230	0.45	-0.3
1,076,463	-		DZA65_RS05230	0.45	-1.6
1,076,526	+		DZA65_RS05230	0.50	-0.2
1,076,526	+		DZA65_RS05230	0.50	-0.4
1,076,641	-		DZA65_RS05230	0.58	+0.2
1,076,861	+		DZA65_RS05230	0.73	-0.3
1,076,861	+		DZA65_RS05230	0.73	-0.8
1,076,870	+		DZA65_RS05230	0.73	-0.7
1,076,870	+		DZA65_RS05230	0.73	-0.6
1,076,870	+		DZA65_RS05230	0.73	+0.3
1,076,870	+		DZA65_RS05230	0.73	-0.1
1,076,870	+		DZA65_RS05230	0.73	-0.6
1,076,870	+		DZA65_RS05230	0.73	-1.1
1,076,871	-		DZA65_RS05230	0.73	-0.4
1,076,871	-		DZA65_RS05230	0.73	-0.3
1,076,871	-		DZA65_RS05230	0.73	+0.7
1,076,871	-		DZA65_RS05230	0.73	-1.8
1,076,871	-		DZA65_RS05230	0.73	-0.8
1,076,871	-		DZA65_RS05230	0.73	-0.7
1,076,924	+		DZA65_RS05230	0.77	-1.1
1,076,924	+		DZA65_RS05230	0.77	-2.6
1,076,924	+		DZA65_RS05230	0.77	-0.7
1,076,924	+		DZA65_RS05230	0.77	-1.7
1,076,925	-		DZA65_RS05230	0.77	-0.8
1,076,925	-		DZA65_RS05230	0.77	-1.6
1,076,925	-		DZA65_RS05230	0.77	+0.7
1,076,925	-		DZA65_RS05230	0.77	+0.7
1,076,942	+		DZA65_RS05230	0.78	-1.0
1,076,942	+		DZA65_RS05230	0.78	-0.6
1,076,942	+		DZA65_RS05230	0.78	-0.3
1,076,943	-		DZA65_RS05230	0.78	+0.2
1,076,943	-		DZA65_RS05230	0.78	+0.3
1,076,943	-		DZA65_RS05230	0.78	-0.6
1,076,943	-		DZA65_RS05230	0.78	+1.7
1,076,943	-		DZA65_RS05230	0.78	-0.5
1,076,975	+		DZA65_RS05230	0.81	-2.7
1,076,976	-		DZA65_RS05230	0.81	+0.1
1,076,976	-		DZA65_RS05230	0.81	-1.3
1,076,976	-		DZA65_RS05230	0.81	-0.3
1,077,065	+		DZA65_RS05230	0.87	+0.2
1,077,121	+				-0.8
1,077,122	-				-0.4
1,077,246	+				+1.3
1,077,246	+				+0.3
1,077,247	-				-0.6
1,077,247	-				+0.2
1,077,333	-				+0.2
1,077,333	-				+2.0
1,077,442	+				+0.5
1,077,443	-				-0.4
1,077,443	-				-1.4
1,077,465	-				-0.3
1,077,465	-				+0.3
1,077,492	+				+0.1
1,077,505	+				+0.4
1,077,505	+				+1.2
1,077,526	-				+1.2
1,077,534	-				+0.0
1,077,534	-				-0.8
1,077,534	-				-0.4
1,077,547	-				+1.2
1,077,554	-				-0.3
1,077,554	-				+0.5
1,077,562	-				+1.7
1,077,591	-				-0.1
1,077,591	-				+0.0
1,077,594	+				+0.5
1,077,607	+				-0.3
1,077,607	+				+0.4
1,077,608	-				-0.2
1,077,640	-				+1.1
1,077,708	+				+0.4
1,077,709	-				+0.0
1,077,718	-				+2.3