Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21735

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,700,688	+		DZA65_RS21730	0.26	-1.0
4,700,688	+		DZA65_RS21730	0.26	+0.8
4,700,689	-		DZA65_RS21730	0.26	-1.5
4,700,689	-		DZA65_RS21730	0.26	+0.3
4,700,689	-		DZA65_RS21730	0.26	-0.2
4,700,784	+		DZA65_RS21730	0.33	-0.2
4,700,784	+		DZA65_RS21730	0.33	+0.5
4,700,785	-		DZA65_RS21730	0.33	-0.6
4,700,785	-		DZA65_RS21730	0.33	+1.2
4,700,841	+		DZA65_RS21730	0.38	+0.7
4,700,841	+		DZA65_RS21730	0.38	+1.3
4,700,841	+		DZA65_RS21730	0.38	-1.2
4,700,841	+		DZA65_RS21730	0.38	-0.4
4,700,841	+		DZA65_RS21730	0.38	-0.8
4,700,841	+		DZA65_RS21730	0.38	-0.3
4,700,841	+		DZA65_RS21730	0.38	+1.5
4,700,841	+		DZA65_RS21730	0.38	+1.7
4,700,841	+		DZA65_RS21730	0.38	-0.0
4,700,842	-		DZA65_RS21730	0.38	+2.3
4,700,842	-		DZA65_RS21730	0.38	-1.0
4,700,842	-		DZA65_RS21730	0.38	-0.5
4,700,842	-		DZA65_RS21730	0.38	-0.5
4,700,842	-		DZA65_RS21730	0.38	+0.7
4,700,842	-		DZA65_RS21730	0.38	-0.0
4,700,842	-		DZA65_RS21730	0.38	-0.9
4,700,842	-		DZA65_RS21730	0.38	+0.4
4,700,843	+		DZA65_RS21730	0.38	+0.5
4,700,843	+		DZA65_RS21730	0.38	+2.0
4,700,843	+		DZA65_RS21730	0.38	+0.4
4,700,843	+		DZA65_RS21730	0.38	+1.5
4,700,843	+				+2.0
4,700,843	+		DZA65_RS21730	0.38	+1.0
4,700,843	+				+2.0
4,700,843	+		DZA65_RS21730	0.38	-0.6
4,700,843	+		DZA65_RS21730	0.38	+0.6
4,700,843	+		DZA65_RS21730	0.38	+0.1
4,700,843	+		DZA65_RS21730	0.38	+0.2
4,700,843	+		DZA65_RS21730	0.38	-0.0
4,700,844	-		DZA65_RS21730	0.38	+1.0
4,700,844	-				+1.0
4,700,844	-		DZA65_RS21730	0.38	-0.7
4,700,844	-		DZA65_RS21730	0.38	+0.1
4,700,844	-		DZA65_RS21730	0.38	-0.8
4,700,844	-		DZA65_RS21730	0.38	+0.5
4,700,844	-		DZA65_RS21730	0.38	-1.5
4,700,844	-		DZA65_RS21730	0.38	+0.3
4,700,844	-		DZA65_RS21730	0.38	-1.2
4,700,844	-		DZA65_RS21730	0.38	-1.4
4,700,844	-		DZA65_RS21730	0.38	+1.6
4,700,844	-		DZA65_RS21730	0.38	+1.4
4,700,873	+		DZA65_RS21730	0.40	-1.6
4,700,873	+		DZA65_RS21730	0.40	-0.8
4,700,873	+		DZA65_RS21730	0.40	-0.4
4,700,873	+		DZA65_RS21730	0.40	-0.4
4,700,873	+		DZA65_RS21730	0.40	-1.8
4,700,873	+		DZA65_RS21730	0.40	+0.1
4,700,873	+		DZA65_RS21730	0.40	+1.0
4,700,873	+		DZA65_RS21730	0.40	-0.4
4,700,873	+		DZA65_RS21730	0.40	-3.0
4,700,873	+		DZA65_RS21730	0.40	+1.4
4,700,873	+		DZA65_RS21730	0.40	-0.4
4,700,873	+		DZA65_RS21730	0.40	+0.4
4,700,873	+		DZA65_RS21730	0.40	-0.3
4,700,873	+		DZA65_RS21730	0.40	+0.1
4,700,873	+		DZA65_RS21730	0.40	+0.2
4,700,873	+		DZA65_RS21730	0.40	+0.2
4,700,874	-		DZA65_RS21730	0.40	-0.5
4,700,874	-		DZA65_RS21730	0.40	-1.4
4,700,874	-		DZA65_RS21730	0.40	-0.8
4,700,874	-		DZA65_RS21730	0.40	+2.5
4,700,874	-		DZA65_RS21730	0.40	+0.4
4,700,874	-		DZA65_RS21730	0.40	-0.7
4,700,874	-		DZA65_RS21730	0.40	+0.2
4,700,874	-		DZA65_RS21730	0.40	+0.7
4,700,874	-		DZA65_RS21730	0.40	-0.2
4,700,874	-		DZA65_RS21730	0.40	+0.4
4,700,902	-		DZA65_RS21730	0.42	-0.4
4,700,932	-		DZA65_RS21730	0.45	+1.2
4,701,018	+		DZA65_RS21730	0.51	+0.5
4,701,018	+		DZA65_RS21730	0.51	-1.4
4,701,018	+		DZA65_RS21730	0.51	-0.5
4,701,019	-		DZA65_RS21730	0.52	-0.5
4,701,019	-		DZA65_RS21730	0.52	+1.6
4,701,059	+		DZA65_RS21730	0.55	+0.2
4,701,059	+		DZA65_RS21730	0.55	-1.1
4,701,060	-		DZA65_RS21730	0.55	+0.0
4,701,060	-		DZA65_RS21730	0.55	-0.4
4,701,158	+		DZA65_RS21730	0.62	-0.4
4,701,159	-		DZA65_RS21730	0.63	+0.5
4,701,159	-		DZA65_RS21730	0.63	+0.0
4,701,159	-		DZA65_RS21730	0.63	-0.2
4,701,161	+		DZA65_RS21730	0.63	-0.0
4,701,161	+		DZA65_RS21730	0.63	-0.0
4,701,161	+		DZA65_RS21730	0.63	+1.0
4,701,179	+		DZA65_RS21730	0.64	+0.6
4,701,179	+		DZA65_RS21730	0.64	-0.8
4,701,179	+		DZA65_RS21730	0.64	-0.5
4,701,179	+		DZA65_RS21730	0.64	-0.0
4,701,185	+		DZA65_RS21730	0.65	+0.2
4,701,185	+		DZA65_RS21730	0.65	+0.3
4,701,186	-		DZA65_RS21730	0.65	+0.5
4,701,200	+		DZA65_RS21730	0.66	-1.8
4,701,200	+		DZA65_RS21730	0.66	+1.1
4,701,200	+		DZA65_RS21730	0.66	-0.9
4,701,270	+		DZA65_RS21730	0.71	+0.7
4,701,270	+		DZA65_RS21730	0.71	-0.8
4,701,270	+		DZA65_RS21730	0.71	-1.8
4,701,271	-		DZA65_RS21730	0.71	-1.0
4,701,271	-		DZA65_RS21730	0.71	-0.4
4,701,275	+		DZA65_RS21730	0.72	-0.0
4,701,275	+		DZA65_RS21730	0.72	-0.4
4,701,275	+		DZA65_RS21730	0.72	-0.0
4,701,275	+		DZA65_RS21730	0.72	+1.8
4,701,275	+		DZA65_RS21730	0.72	-0.5
4,701,275	+		DZA65_RS21730	0.72	+0.6
4,701,275	+		DZA65_RS21730	0.72	-1.4
4,701,275	+		DZA65_RS21730	0.72	+0.9
4,701,275	+		DZA65_RS21730	0.72	-0.0
4,701,275	+		DZA65_RS21730	0.72	+1.7
4,701,275	+		DZA65_RS21730	0.72	+0.8
4,701,275	+		DZA65_RS21730	0.72	+1.0
4,701,275	+		DZA65_RS21730	0.72	-0.8
4,701,276	-		DZA65_RS21730	0.72	+0.8
4,701,276	-				+1.0
4,701,276	-		DZA65_RS21730	0.72	+0.6
4,701,276	-		DZA65_RS21730	0.72	-0.5
4,701,276	-		DZA65_RS21730	0.72	+1.0
4,701,276	-		DZA65_RS21730	0.72	-1.5
4,701,276	-		DZA65_RS21730	0.72	+0.6
4,701,276	-		DZA65_RS21730	0.72	+1.2
4,701,276	-		DZA65_RS21730	0.72	-1.2
4,701,403	+		DZA65_RS21730	0.82	-1.2
4,701,403	+		DZA65_RS21730	0.82	-0.4
4,701,404	-		DZA65_RS21730	0.82	+1.3
4,701,404	-		DZA65_RS21730	0.82	-0.8
4,701,472	+		DZA65_RS21730	0.87	-0.3
4,701,472	+		DZA65_RS21730	0.87	+2.5
4,701,472	+		DZA65_RS21730	0.87	-0.8
4,701,472	+		DZA65_RS21730	0.87	+1.0
4,701,473	-		DZA65_RS21730	0.87	-1.4
4,701,577	-				+0.6
4,701,577	-				+0.1
4,701,577	-				-1.2
4,701,604	+				-0.2
4,701,604	+				+1.4
4,701,636	+				-2.0
4,701,636	+				+1.0
4,701,636	+				+1.7
4,701,637	-				+1.5
4,701,637	-				-1.0
4,701,637	-				-0.5
4,701,637	-				+0.1
4,701,725	-				-1.0
4,701,725	-				-0.8
4,701,725	-				+0.2
4,701,725	-				+1.2
4,701,725	-				+0.0
4,701,725	-				-1.1
4,701,725	-				-0.2
4,701,725	-				+0.1
4,701,862	+		DZA65_RS21735	0.25	-0.5
4,701,862	+		DZA65_RS21735	0.25	-1.0
4,701,862	+		DZA65_RS21735	0.25	+0.5
4,701,862	+		DZA65_RS21735	0.25	-0.5
4,701,862	+		DZA65_RS21735	0.25	+0.2
4,701,862	+		DZA65_RS21735	0.25	+0.6
4,701,862	+		DZA65_RS21735	0.25	+0.6
4,701,862	+		DZA65_RS21735	0.25	+1.3
4,701,862	+		DZA65_RS21735	0.25	-0.8
4,701,862	+		DZA65_RS21735	0.25	-0.1
4,701,862	+		DZA65_RS21735	0.25	+1.5
4,701,863	-		DZA65_RS21735	0.25	-2.4
4,701,863	-		DZA65_RS21735	0.25	-0.5
4,701,863	-		DZA65_RS21735	0.25	-0.6
4,701,863	-		DZA65_RS21735	0.25	+0.4
4,701,863	-		DZA65_RS21735	0.25	-0.6
4,701,863	-		DZA65_RS21735	0.25	-0.0
4,701,863	-		DZA65_RS21735	0.25	+0.2
4,701,863	-		DZA65_RS21735	0.25	-0.2
4,701,863	-		DZA65_RS21735	0.25	+0.1
4,701,869	+		DZA65_RS21735	0.25	-0.3
4,701,869	+		DZA65_RS21735	0.25	+0.2
4,701,880	+		DZA65_RS21735	0.27	-2.2
4,701,880	+		DZA65_RS21735	0.27	-1.0
4,701,880	+		DZA65_RS21735	0.27	-1.5
4,701,881	-		DZA65_RS21735	0.27	+0.0
4,702,037	+		DZA65_RS21735	0.44	+0.7
4,702,038	-		DZA65_RS21735	0.44	+0.4
4,702,198	+		DZA65_RS21735	0.61	-0.0
4,702,198	+		DZA65_RS21735	0.61	+1.0
4,702,198	+		DZA65_RS21735	0.61	-2.4
4,702,198	+		DZA65_RS21735	0.61	-0.0
4,702,198	+		DZA65_RS21735	0.61	-0.5
4,702,199	-		DZA65_RS21735	0.61	+0.8
4,702,199	-		DZA65_RS21735	0.61	-1.1
4,702,199	-		DZA65_RS21735	0.61	-2.2
4,702,199	-		DZA65_RS21735	0.61	-0.8
4,702,199	-		DZA65_RS21735	0.61	+0.5
4,702,199	-		DZA65_RS21735	0.61	+0.5
4,702,199	-		DZA65_RS21735	0.61	-0.8
4,702,273	+		DZA65_RS21735	0.69	+0.3
4,702,273	+		DZA65_RS21735	0.69	-0.1
4,702,273	+		DZA65_RS21735	0.69	-0.1
4,702,273	+		DZA65_RS21735	0.69	+0.1
4,702,273	+		DZA65_RS21735	0.69	-0.3
4,702,301	-		DZA65_RS21735	0.72	-0.0
4,702,394	+		DZA65_RS21735	0.82	-0.6
4,702,394	+		DZA65_RS21735	0.82	-0.4
4,702,395	-		DZA65_RS21735	0.82	+0.7
4,702,395	-		DZA65_RS21735	0.82	+1.0
4,702,405	+		DZA65_RS21735	0.83	-0.2
4,702,405	+		DZA65_RS21735	0.83	-0.3
4,702,405	+		DZA65_RS21735	0.83	-0.4
4,702,405	+		DZA65_RS21735	0.83	-0.2
4,702,405	+		DZA65_RS21735	0.83	-1.3
4,702,405	+		DZA65_RS21735	0.83	+2.1
4,702,405	+		DZA65_RS21735	0.83	+0.2
4,702,405	+		DZA65_RS21735	0.83	-0.3
4,702,405	+		DZA65_RS21735	0.83	+0.5
4,702,405	+		DZA65_RS21735	0.83	-0.4
4,702,405	+		DZA65_RS21735	0.83	-0.0
4,702,405	+		DZA65_RS21735	0.83	+1.2
4,702,405	+		DZA65_RS21735	0.83	-2.4
4,702,405	+		DZA65_RS21735	0.83	+1.0
4,702,405	+		DZA65_RS21735	0.83	+0.5
4,702,405	+		DZA65_RS21735	0.83	+0.3
4,702,406	-		DZA65_RS21735	0.83	-0.2
4,702,406	-		DZA65_RS21735	0.83	-0.6
4,702,406	-		DZA65_RS21735	0.83	-0.4
4,702,406	-		DZA65_RS21735	0.83	-2.0
4,702,406	-		DZA65_RS21735	0.83	-1.4
4,702,406	-		DZA65_RS21735	0.83	-0.2
4,702,406	-		DZA65_RS21735	0.83	-0.6
4,702,406	-		DZA65_RS21735	0.83	+0.5
4,702,406	-		DZA65_RS21735	0.83	+1.0
4,702,406	-		DZA65_RS21735	0.83	-0.8
4,702,406	-		DZA65_RS21735	0.83	-0.8
4,702,406	-		DZA65_RS21735	0.83	-0.2
4,702,406	-		DZA65_RS21735	0.83	-0.6
4,702,406	-		DZA65_RS21735	0.83	-0.3
4,702,406	-		DZA65_RS21735	0.83	+0.8
4,702,406	-		DZA65_RS21735	0.83	+1.4
4,702,406	-		DZA65_RS21735	0.83	+0.7
4,702,406	-		DZA65_RS21735	0.83	+0.5
4,702,406	-		DZA65_RS21735	0.83	+1.0
4,702,406	-		DZA65_RS21735	0.83	-0.3
4,702,409	+		DZA65_RS21735	0.84	-0.6
4,702,410	-		DZA65_RS21735	0.84	-0.4
4,702,410	-		DZA65_RS21735	0.84	-1.2
4,702,420	+		DZA65_RS21735	0.85	-0.5
4,702,420	+		DZA65_RS21735	0.85	+0.1
4,702,420	+		DZA65_RS21735	0.85	-1.5
4,702,420	+		DZA65_RS21735	0.85	-3.6
4,702,420	+		DZA65_RS21735	0.85	+0.2
4,702,420	+		DZA65_RS21735	0.85	-1.0
4,702,420	+		DZA65_RS21735	0.85	-0.2
4,702,420	+		DZA65_RS21735	0.85	-0.1
4,702,420	+		DZA65_RS21735	0.85	+1.4
4,702,420	+		DZA65_RS21735	0.85	+1.0
4,702,420	+		DZA65_RS21735	0.85	-0.9
4,702,420	+		DZA65_RS21735	0.85	+0.4
4,702,420	+		DZA65_RS21735	0.85	-0.4
4,702,420	+		DZA65_RS21735	0.85	+1.5
4,702,421	-		DZA65_RS21735	0.85	-1.4
4,702,421	-		DZA65_RS21735	0.85	-0.3
4,702,421	-		DZA65_RS21735	0.85	+1.7
4,702,442	+		DZA65_RS21735	0.87	+0.1
4,702,442	+		DZA65_RS21735	0.87	-1.3
4,702,442	+		DZA65_RS21735	0.87	-0.6
4,702,442	+		DZA65_RS21735	0.87	-0.6
4,702,442	+		DZA65_RS21735	0.87	+1.6
4,702,442	+		DZA65_RS21735	0.87	-0.9
4,702,442	+		DZA65_RS21735	0.87	-2.4
4,702,442	+		DZA65_RS21735	0.87	-0.0
4,702,442	+		DZA65_RS21735	0.87	+0.1
4,702,443	-		DZA65_RS21735	0.87	-1.2
4,702,443	-		DZA65_RS21735	0.87	+0.4
4,702,443	-		DZA65_RS21735	0.87	+1.1
4,702,443	-		DZA65_RS21735	0.87	+1.0
4,702,455	-		DZA65_RS21735	0.89	-0.3
4,702,463	-		DZA65_RS21735	0.90	-0.0
4,702,474	+				-1.0
4,702,475	-				-1.0
4,702,475	-				-0.8
4,702,495	+				-0.4
4,702,495	+				+0.2
4,702,495	+				-0.5
4,702,495	+				-0.8
4,702,495	+				+0.3
4,702,495	+				-0.6
4,702,495	+				-0.6
4,702,495	+				-0.5
4,702,495	+				-0.1
4,702,495	+				-0.3
4,702,495	+				+0.2
4,702,495	+				-0.9
4,702,496	-				-1.0
4,702,496	-				+0.5
4,702,496	-				+1.1
4,702,496	-				+0.1
4,702,496	-				-1.0
4,702,540	+				+0.5
4,702,541	-				-1.0
4,702,541	-				-0.5
4,702,541	-				-0.8
4,702,541	-				+1.8
4,702,541	-				+0.3
4,702,541	-				-0.6
4,702,541	-				-0.6
4,702,559	+				+0.2
4,702,559	+				-0.0
4,702,559	+				-0.5
4,702,559	+				-1.4
4,702,559	+				+0.8
4,702,560	-				+0.2
4,702,560	-				+0.7
4,702,560	-				-0.5
4,702,560	-				+1.2
4,702,560	-				+3.5
4,702,560	-				-0.2
4,702,560	-				-1.7
4,702,560	-				-0.7
4,702,560	-				+0.2
4,702,560	-				-1.6
4,702,560	-				-3.1
4,702,560	-				+0.2
4,702,564	+				-0.0
4,702,565	-				+0.2
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