Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17390

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,748,389	-				+2.9
3,748,389	-				-1.7
3,748,389	-				+0.9
3,748,403	-				+0.9
3,748,403	-				-0.3
3,748,403	-				-0.1
3,748,403	-				-1.0
3,748,403	-				-2.7
3,748,403	-				+0.6
3,748,403	-				-1.7
3,748,403	-				+0.1
3,748,405	-				+0.3
3,748,405	-				+1.3
3,748,405	-				-0.1
3,748,445	-				+0.2
3,748,468	+				+0.4
3,748,474	+				-1.0
3,748,474	+				-0.1
3,748,474	+				-0.3
3,748,474	+				-1.1
3,748,474	+				-0.4
3,748,475	-				-1.0
3,748,475	-				+0.6
3,748,475	-				+1.6
3,748,475	-				-1.2
3,748,476	+				-1.4
3,748,476	+				-0.7
3,748,477	-				-1.0
3,748,477	-				+0.8
3,748,477	-				-0.4
3,748,493	-				+0.8
3,748,503	+				-0.3
3,748,509	+				+0.3
3,748,509	+				-0.8
3,748,509	+				-2.5
3,748,510	-				+0.6
3,748,510	-				-1.4
3,748,510	-				-1.1
3,748,510	-				+0.3
3,748,529	+				-1.2
3,748,530	-				-2.3
3,748,530	-				+0.6
3,748,530	-				+0.2
3,748,543	+				+0.1
3,748,543	+				-0.0
3,748,543	+				-1.2
3,748,544	-				-1.0
3,748,544	-				+0.6
3,748,566	+				-0.6
3,748,614	-		DZA65_RS17390	0.13	-1.2
3,748,614	-		DZA65_RS17390	0.13	-0.6
3,748,617	-		DZA65_RS17390	0.13	-1.4
3,748,657	+		DZA65_RS17390	0.18	-2.4
3,748,657	+				+0.6
3,748,657	+		DZA65_RS17390	0.18	+0.2
3,748,657	+		DZA65_RS17390	0.18	-0.1
3,748,657	+		DZA65_RS17390	0.18	-1.3
3,748,657	+		DZA65_RS17390	0.18	-0.1
3,748,657	+		DZA65_RS17390	0.18	+0.9
3,748,658	-		DZA65_RS17390	0.19	-1.2
3,748,658	-		DZA65_RS17390	0.19	-2.0
3,748,658	-		DZA65_RS17390	0.19	-1.7
3,748,658	-		DZA65_RS17390	0.19	-0.1
3,748,658	-		DZA65_RS17390	0.19	-0.6
3,748,658	-		DZA65_RS17390	0.19	-1.1
3,748,658	-		DZA65_RS17390	0.19	-1.0
3,748,658	-		DZA65_RS17390	0.19	-3.2
3,748,658	-		DZA65_RS17390	0.19	-0.3
3,748,658	-		DZA65_RS17390	0.19	-0.4
3,748,665	+		DZA65_RS17390	0.19	+0.0
3,748,665	+		DZA65_RS17390	0.19	-0.1
3,748,666	-		DZA65_RS17390	0.20	-1.3
3,748,666	-		DZA65_RS17390	0.20	+0.1
3,748,666	-		DZA65_RS17390	0.20	-2.6
3,748,731	+				+1.2
3,748,731	+		DZA65_RS17390	0.28	+0.3
3,748,738	-		DZA65_RS17390	0.29	+0.2
3,748,738	-		DZA65_RS17390	0.29	+0.1
3,748,754	+		DZA65_RS17390	0.31	-0.5
3,748,754	+		DZA65_RS17390	0.31	+0.6
3,748,754	+		DZA65_RS17390	0.31	-0.4
3,748,795	+		DZA65_RS17390	0.36	-0.6
3,748,795	+		DZA65_RS17390	0.36	-0.7
3,748,795	+		DZA65_RS17390	0.36	-1.1
3,748,795	+		DZA65_RS17390	0.36	-1.7
3,748,795	+		DZA65_RS17390	0.36	-2.2
3,748,795	+		DZA65_RS17390	0.36	+0.1
3,748,795	+		DZA65_RS17390	0.36	+0.0
3,748,796	-		DZA65_RS17390	0.36	+0.0
3,748,796	-		DZA65_RS17390	0.36	-0.7
3,748,796	-		DZA65_RS17390	0.36	+0.6
3,748,796	-		DZA65_RS17390	0.36	-1.9
3,748,796	-		DZA65_RS17390	0.36	-1.4
3,748,796	-		DZA65_RS17390	0.36	-2.2
3,748,796	-		DZA65_RS17390	0.36	-1.0
3,748,796	-		DZA65_RS17390	0.36	+0.6
3,748,796	-		DZA65_RS17390	0.36	-0.4
3,748,796	-		DZA65_RS17390	0.36	-0.1
3,748,796	-		DZA65_RS17390	0.36	+0.1
3,748,813	-		DZA65_RS17390	0.38	-1.7
3,748,848	+		DZA65_RS17390	0.43	+0.2
3,748,848	+		DZA65_RS17390	0.43	-0.7
3,748,848	+		DZA65_RS17390	0.43	-1.1
3,748,848	+		DZA65_RS17390	0.43	-1.0
3,748,849	-		DZA65_RS17390	0.43	+0.2
3,748,883	+		DZA65_RS17390	0.47	-1.0
3,748,883	+		DZA65_RS17390	0.47	-0.5
3,748,884	-		DZA65_RS17390	0.47	+1.9
3,748,884	-		DZA65_RS17390	0.47	+0.0
3,748,909	+		DZA65_RS17390	0.50	-0.2
3,748,936	+		DZA65_RS17390	0.54	+1.2
3,748,936	+		DZA65_RS17390	0.54	-1.5
3,748,936	+		DZA65_RS17390	0.54	-0.7
3,748,936	+		DZA65_RS17390	0.54	-0.8
3,748,936	+		DZA65_RS17390	0.54	-0.9
3,748,936	+		DZA65_RS17390	0.54	-0.8
3,748,936	+		DZA65_RS17390	0.54	-0.4
3,748,936	+		DZA65_RS17390	0.54	+0.2
3,748,937	-		DZA65_RS17390	0.54	-1.7
3,748,937	-		DZA65_RS17390	0.54	-1.4
3,748,937	-		DZA65_RS17390	0.54	-1.4
3,748,937	-		DZA65_RS17390	0.54	-1.4
3,748,937	-		DZA65_RS17390	0.54	-1.0
3,748,937	-		DZA65_RS17390	0.54	-1.7
3,748,937	-		DZA65_RS17390	0.54	-2.2
3,748,963	+		DZA65_RS17390	0.57	-1.7
3,748,963	+		DZA65_RS17390	0.57	+1.2
3,748,963	+		DZA65_RS17390	0.57	-0.7
3,748,963	+		DZA65_RS17390	0.57	-0.1
3,748,964	-		DZA65_RS17390	0.57	-0.6
3,748,964	-		DZA65_RS17390	0.57	-0.2
3,748,964	-		DZA65_RS17390	0.57	-0.7
3,748,964	-		DZA65_RS17390	0.57	-1.1
3,749,078	+		DZA65_RS17390	0.71	-0.6
3,749,079	-		DZA65_RS17390	0.72	+1.2
3,749,091	+		DZA65_RS17390	0.73	-2.4
3,749,091	+		DZA65_RS17390	0.73	+0.1
3,749,091	+		DZA65_RS17390	0.73	+0.6
3,749,091	+		DZA65_RS17390	0.73	-0.1
3,749,091	+		DZA65_RS17390	0.73	-1.5
3,749,092	-		DZA65_RS17390	0.73	-2.6
3,749,092	-		DZA65_RS17390	0.73	+0.7
3,749,092	-		DZA65_RS17390	0.73	+0.3
3,749,095	+		DZA65_RS17390	0.74	-1.0
3,749,095	+		DZA65_RS17390	0.74	-0.2
3,749,095	+		DZA65_RS17390	0.74	-1.4
3,749,095	+		DZA65_RS17390	0.74	-0.6
3,749,095	+		DZA65_RS17390	0.74	+0.8
3,749,095	+		DZA65_RS17390	0.74	-0.4
3,749,095	+		DZA65_RS17390	0.74	-1.2
3,749,095	+		DZA65_RS17390	0.74	-0.8
3,749,095	+		DZA65_RS17390	0.74	-0.8
3,749,095	+		DZA65_RS17390	0.74	-0.8
3,749,095	+		DZA65_RS17390	0.74	-0.7
3,749,096	-		DZA65_RS17390	0.74	-1.2
3,749,096	-		DZA65_RS17390	0.74	-0.1
3,749,096	-		DZA65_RS17390	0.74	+0.1
3,749,096	-		DZA65_RS17390	0.74	-1.1
3,749,096	-		DZA65_RS17390	0.74	-1.5
3,749,096	-		DZA65_RS17390	0.74	+0.0
3,749,119	-		DZA65_RS17390	0.77	-1.6
3,749,119	-		DZA65_RS17390	0.77	-0.6
3,749,119	-		DZA65_RS17390	0.77	-1.4
3,749,134	-		DZA65_RS17390	0.78	-1.4
3,749,134	-		DZA65_RS17390	0.78	-1.0
3,749,168	-		DZA65_RS17390	0.83	-1.0
3,749,168	-		DZA65_RS17390	0.83	+1.2
3,749,191	+		DZA65_RS17390	0.86	+0.2
3,749,191	+		DZA65_RS17390	0.86	-0.8
3,749,191	+		DZA65_RS17390	0.86	-0.3
3,749,192	-		DZA65_RS17390	0.86	-1.1
3,749,192	-		DZA65_RS17390	0.86	-0.7
3,749,219	+		DZA65_RS17390	0.89	+0.4
3,749,219	+		DZA65_RS17390	0.89	+1.5
3,749,219	+		DZA65_RS17390	0.89	+0.6
3,749,223	-		DZA65_RS17390	0.90	-0.8
3,749,223	-		DZA65_RS17390	0.90	+0.3
3,749,223	-		DZA65_RS17390	0.90	-0.4
3,749,263	+				-1.3
3,749,264	-				-0.8
3,749,328	+				-0.1
3,749,328	+				+0.6
3,749,328	+				-0.4
3,749,339	+				+0.9
3,749,339	+				-1.0
3,749,340	-				-0.6
3,749,352	+				+0.2
3,749,353	-				+0.1
3,749,379	+				+0.6
3,749,379	+				+0.6
3,749,379	+				-1.4
3,749,387	+				+0.7
3,749,387	+				+0.0
3,749,388	-				+0.2
3,749,388	-				+1.0
3,749,388	-				-0.5
3,749,388	-				-0.2
3,749,388	-				+0.6
3,749,398	+				+0.2
3,749,398	+				+0.1
3,749,398	+				-0.4
3,749,398	+				-2.4
3,749,399	-				-0.3
3,749,399	-				-1.2
3,749,399	-				-0.4
3,749,399	-				-0.2
3,749,407	+				-1.0
3,749,408	-				+0.5
3,749,408	-				+0.3
3,749,526	+		DZA65_RS17395	0.24	+0.2
3,749,526	+		DZA65_RS17395	0.24	-0.5
3,749,527	-				-2.0
3,749,527	-		DZA65_RS17395	0.24	-0.3
3,749,527	-		DZA65_RS17395	0.24	+0.6
3,749,527	-				+0.0
3,749,527	-		DZA65_RS17395	0.24	+0.9
3,749,527	-		DZA65_RS17395	0.24	+1.3
3,749,541	+		DZA65_RS17395	0.27	-2.4
3,749,542	-		DZA65_RS17395	0.27	-0.4
3,749,542	-		DZA65_RS17395	0.27	-0.1
3,749,582	-		DZA65_RS17395	0.35	+0.5
3,749,582	-		DZA65_RS17395	0.35	-1.8
3,749,582	-		DZA65_RS17395	0.35	-0.9
3,749,582	-		DZA65_RS17395	0.35	+0.0
3,749,655	+		DZA65_RS17395	0.49	-1.4
3,749,655	+		DZA65_RS17395	0.49	+1.2
3,749,655	+		DZA65_RS17395	0.49	+1.6
3,749,655	+		DZA65_RS17395	0.49	-0.4
3,749,656	-		DZA65_RS17395	0.49	-0.8
3,749,656	-		DZA65_RS17395	0.49	-0.5
3,749,678	-		DZA65_RS17395	0.53	+0.3
3,749,678	-		DZA65_RS17395	0.53	+0.0
3,749,686	+		DZA65_RS17395	0.55	-0.6
3,749,687	-		DZA65_RS17395	0.55	-1.1
3,749,788	+		DZA65_RS17395	0.75	-0.1
3,749,788	+		DZA65_RS17395	0.75	-0.6
3,749,788	+		DZA65_RS17395	0.75	+0.2
3,749,789	-		DZA65_RS17395	0.75	-0.1
3,749,789	-		DZA65_RS17395	0.75	+0.6
3,749,789	-		DZA65_RS17395	0.75	-1.0
3,749,789	-		DZA65_RS17395	0.75	+0.6
3,749,789	-		DZA65_RS17395	0.75	-0.5
3,749,789	-				+2.2
3,749,789	-		DZA65_RS17395	0.75	-0.4
3,749,789	-		DZA65_RS17395	0.75	-0.2
3,749,804	+		DZA65_RS17395	0.78	+0.1
3,749,804	+		DZA65_RS17395	0.78	+0.6
3,749,805	-		DZA65_RS17395	0.78	-0.1
3,749,805	-		DZA65_RS17395	0.78	-0.1
3,749,805	-		DZA65_RS17395	0.78	-1.0
3,749,824	+		DZA65_RS17395	0.82	+0.5
3,749,824	+		DZA65_RS17395	0.82	-1.1
3,749,825	-		DZA65_RS17395	0.82	+0.2
3,749,879	-				-1.0
3,749,884	+				+1.6
3,749,885	-				-0.1
3,749,885	-				-1.1
3,749,885	-				+0.6
3,749,896	+				-0.4
3,749,896	+				+1.4
3,749,897	-				+1.7
3,749,902	+				-1.7
3,749,902	+				-1.0
3,749,902	+				+0.2
3,749,902	+				+0.2
3,749,902	+				-0.3
3,749,903	-				-0.1
3,749,903	-				+2.3
3,749,903	-				+1.2
3,749,903	-				+0.5
3,749,903	-				+0.6
3,749,903	-				-1.7
3,749,906	+				-1.0
3,749,906	+				+1.4
3,749,906	+				+0.1
3,749,906	+				-2.0
3,749,906	+				+2.6
3,749,906	+				+1.3
3,749,906	+				-0.7
3,749,907	-				-2.0
3,749,907	-				-0.3
3,749,907	-				+2.4
3,749,907	-				-0.7
3,749,907	-				+1.0
3,749,907	-				+0.8
3,749,907	-				-1.2
3,749,907	-				+1.6
3,749,907	-				-0.3
3,749,907	-				+0.6
3,749,907	-				+0.7
3,749,907	-				-0.8
3,749,907	-				-0.1
3,749,907	-				-0.1
3,749,907	-				-0.6
3,749,910	-				+0.4
3,749,910	-				+0.1
3,749,923	+				-0.1
3,749,984	+				+0.9
3,749,984	+				-0.1
3,749,985	-				+0.3
3,750,006	+				+1.2
3,750,007	-				+1.3
3,750,007	-				-0.9
3,750,009	+				-1.5
3,750,010	-				+0.3
3,750,021	+				-0.1
3,750,025	-				-0.8
3,750,085	+				+1.0
3,750,085	+				+2.0
3,750,085	+				+0.3
3,750,086	-				+0.8
3,750,086	-				-0.4
3,750,086	-				-0.3
3,750,086	-				+0.6
3,750,104	+				-0.3
3,750,119	+				+0.6
3,750,120	-				-0.2
3,750,245	+				-1.4
3,750,246	-				-0.4