Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16685

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,600,880	+		DZA65_RS16680	0.35	+2.1
3,600,880	+		DZA65_RS16680	0.35	-0.7
3,600,880	+		DZA65_RS16680	0.35	-1.1
3,600,881	-		DZA65_RS16680	0.35	-0.3
3,600,981	+		DZA65_RS16680	0.47	-0.0
3,600,982	-		DZA65_RS16680	0.47	-1.0
3,600,982	-		DZA65_RS16680	0.47	-0.7
3,600,982	-		DZA65_RS16680	0.47	-0.1
3,600,982	-		DZA65_RS16680	0.47	-0.6
3,600,982	-		DZA65_RS16680	0.47	-2.4
3,600,999	+		DZA65_RS16680	0.49	+0.9
3,600,999	+		DZA65_RS16680	0.49	-0.3
3,600,999	+		DZA65_RS16680	0.49	+1.5
3,600,999	+		DZA65_RS16680	0.49	-0.4
3,600,999	+		DZA65_RS16680	0.49	-0.2
3,600,999	+		DZA65_RS16680	0.49	-0.5
3,600,999	+		DZA65_RS16680	0.49	+0.8
3,601,000	-		DZA65_RS16680	0.50	-0.0
3,601,027	+		DZA65_RS16680	0.53	+1.0
3,601,027	+		DZA65_RS16680	0.53	-0.8
3,601,028	-		DZA65_RS16680	0.53	+1.0
3,601,028	-		DZA65_RS16680	0.53	+1.7
3,601,251	+		DZA65_RS16680	0.81	+1.0
3,601,252	-		DZA65_RS16680	0.81	-2.3
3,601,295	+		DZA65_RS16680	0.87	-0.4
3,601,295	+		DZA65_RS16680	0.87	+0.8
3,601,295	+		DZA65_RS16680	0.87	-0.5
3,601,295	+		DZA65_RS16680	0.87	-0.7
3,601,295	+		DZA65_RS16680	0.87	-0.5
3,601,295	+		DZA65_RS16680	0.87	-1.5
3,601,295	+		DZA65_RS16680	0.87	+0.8
3,601,295	+		DZA65_RS16680	0.87	-1.8
3,601,295	+		DZA65_RS16680	0.87	+0.5
3,601,295	+		DZA65_RS16680	0.87	+0.8
3,601,295	+		DZA65_RS16680	0.87	-1.0
3,601,295	+				-0.0
3,601,295	+		DZA65_RS16680	0.87	+0.5
3,601,296	-		DZA65_RS16680	0.87	+0.0
3,601,296	-		DZA65_RS16680	0.87	+0.8
3,601,296	-		DZA65_RS16680	0.87	-1.9
3,601,296	-		DZA65_RS16680	0.87	-0.1
3,601,296	-		DZA65_RS16680	0.87	+0.1
3,601,296	-		DZA65_RS16680	0.87	+0.5
3,601,296	-		DZA65_RS16680	0.87	-1.1
3,601,296	-		DZA65_RS16680	0.87	-0.9
3,601,297	+		DZA65_RS16680	0.87	+0.7
3,601,297	+		DZA65_RS16680	0.87	-2.0
3,601,297	+		DZA65_RS16680	0.87	-0.3
3,601,297	+		DZA65_RS16680	0.87	+0.5
3,601,297	+		DZA65_RS16680	0.87	-0.2
3,601,297	+		DZA65_RS16680	0.87	+0.5
3,601,297	+		DZA65_RS16680	0.87	+1.3
3,601,297	+		DZA65_RS16680	0.87	-1.1
3,601,297	+		DZA65_RS16680	0.87	-0.5
3,601,297	+		DZA65_RS16680	0.87	+1.0
3,601,297	+		DZA65_RS16680	0.87	+2.9
3,601,298	-		DZA65_RS16680	0.87	-0.7
3,601,298	-		DZA65_RS16680	0.87	+0.1
3,601,298	-		DZA65_RS16680	0.87	+0.8
3,601,298	-		DZA65_RS16680	0.87	-0.2
3,601,298	-		DZA65_RS16680	0.87	-1.0
3,601,298	-		DZA65_RS16680	0.87	-1.5
3,601,419	-				-1.5
3,601,419	-				-0.3
3,601,424	+				+0.4
3,601,430	+				-0.4
3,601,431	-				-0.7
3,601,431	-				-0.3
3,601,431	-				+0.5
3,601,431	-				+2.1
3,601,431	-				+0.3
3,601,431	-				-0.5
3,601,431	-				-0.5
3,601,434	+				+0.0
3,601,434	+				-0.2
3,601,434	+				-0.5
3,601,434	+				+0.5
3,601,434	+				+0.1
3,601,435	-				-0.2
3,601,435	-				+0.5
3,601,435	-				-0.5
3,601,473	+				-0.2
3,601,473	+				-0.9
3,601,473	+				-0.3
3,601,473	+				-1.6
3,601,474	-				-0.2
3,601,474	-				-0.6
3,601,474	-				-0.5
3,601,474	-				+0.3
3,601,474	-				-1.5
3,601,474	-				+0.2
3,601,474	-				-0.0
3,601,479	+				+1.1
3,601,479	+				+0.5
3,601,479	+				-0.7
3,601,479	+				-0.3
3,601,479	+				+1.0
3,601,479	+				-0.6
3,601,480	-				-0.2
3,601,480	-				-0.2
3,601,480	-				-0.6
3,601,480	-				+0.3
3,601,480	-				+0.3
3,601,480	-				+0.5
3,601,480	-				-0.1
3,601,480	-				-0.3
3,601,480	-				+0.6
3,601,486	+				+0.5
3,601,486	+				-1.2
3,601,486	+				-0.6
3,601,486	+				+1.5
3,601,486	+				+0.7
3,601,486	+				+1.1
3,601,486	+				+0.4
3,601,487	-				+0.9
3,601,487	-				+0.0
3,601,487	-				+0.2
3,601,487	-				-0.5
3,601,487	-				+0.1
3,601,718	+				-0.1
3,601,718	+				+0.5
3,601,718	+				-0.6
3,601,718	+				-0.6
3,601,718	+				-1.8
3,601,718	+				+0.5
3,601,718	+				+0.5
3,601,718	+				-0.0
3,601,721	+				-0.2
3,601,722	-				-0.8
3,601,722	-				-1.0
3,601,722	-				+0.3
3,601,722	-				+1.8
3,601,722	-				-0.9
3,601,722	-				+0.4
3,601,733	+				-0.5
3,601,733	+				+0.7
3,601,734	-				+1.3
3,601,743	-				-0.3
3,601,789	-				+0.0
3,601,908	-				-2.6
3,601,927	-				-1.0
3,601,927	-				-0.2
3,601,946	+		DZA65_RS16685	0.10	-0.6
3,602,159	+		DZA65_RS16685	0.26	-0.5
3,602,159	+		DZA65_RS16685	0.26	-0.7
3,602,160	-		DZA65_RS16685	0.27	-0.4
3,602,160	-		DZA65_RS16685	0.27	-0.0
3,602,160	-		DZA65_RS16685	0.27	-0.9
3,602,284	-		DZA65_RS16685	0.36	-0.2
3,602,304	+		DZA65_RS16685	0.38	-0.5
3,602,305	-		DZA65_RS16685	0.38	+0.5
3,602,325	+		DZA65_RS16685	0.39	+0.1
3,602,517	+		DZA65_RS16685	0.54	-0.9
3,602,517	+		DZA65_RS16685	0.54	-0.5
3,602,518	-		DZA65_RS16685	0.54	+0.2
3,602,518	-		DZA65_RS16685	0.54	+0.9
3,602,576	+		DZA65_RS16685	0.59	-0.0
3,602,576	+		DZA65_RS16685	0.59	-0.3
3,602,577	-		DZA65_RS16685	0.59	+0.1
3,602,577	-		DZA65_RS16685	0.59	+0.1
3,602,577	-		DZA65_RS16685	0.59	-0.7
3,602,577	-		DZA65_RS16685	0.59	-0.5
3,602,577	-		DZA65_RS16685	0.59	-0.8
3,602,577	-		DZA65_RS16685	0.59	-0.7
3,602,577	-		DZA65_RS16685	0.59	+0.5
3,602,639	+		DZA65_RS16685	0.64	-1.0
3,602,639	+		DZA65_RS16685	0.64	+1.1
3,602,639	+		DZA65_RS16685	0.64	-0.8
3,602,640	-		DZA65_RS16685	0.64	-0.5
3,602,640	-		DZA65_RS16685	0.64	-0.5
3,602,640	-		DZA65_RS16685	0.64	-1.5
3,602,670	+		DZA65_RS16685	0.66	-0.3
3,602,940	+		DZA65_RS16685	0.87	+1.3
3,602,940	+		DZA65_RS16685	0.87	-0.7
3,602,940	+		DZA65_RS16685	0.87	+0.8
3,602,940	+		DZA65_RS16685	0.87	-0.5
3,602,941	-		DZA65_RS16685	0.87	+1.3
3,602,941	-		DZA65_RS16685	0.87	-0.9
3,602,982	+				-1.5
3,602,982	+				-0.5
3,602,982	+				+0.6
3,602,982	+				+2.1
3,602,982	+				+0.7
3,602,982	+				+1.1
3,602,983	-				-0.1
3,602,983	-				-1.9
3,602,983	-				-1.0
3,603,015	+				-1.0
3,603,015	+				+1.5
3,603,015	+				-0.0
3,603,111	+				+1.3
3,603,118	-				+1.1
3,603,151	-				+1.0
3,603,161	+				+0.5
3,603,161	+				-0.0
3,603,161	+				-0.3
3,603,162	-				-0.4
3,603,314	+		DZA65_RS16690	0.52	+0.5
3,603,315	-		DZA65_RS16690	0.53	-0.2
3,603,315	-		DZA65_RS16690	0.53	-0.5
3,603,354	+		DZA65_RS16690	0.72	+0.5
3,603,363	+		DZA65_RS16690	0.77	+0.3
3,603,410	-				-1.5
3,603,410	-				-0.0
3,603,415	-				+0.7
3,603,415	-				-0.5
3,603,447	+				-1.0
3,603,448	-				-0.3
3,603,448	-				-0.9
3,603,759	+				-2.8
3,603,761	+				+0.4
3,603,762	-				-2.6
3,603,846	-				+0.4