Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14855

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,238,307	-		DZA65_RS14850	0.74	+0.1
3,238,307	-		DZA65_RS14850	0.74	-0.5
3,238,323	+		DZA65_RS14850	0.75	-1.6
3,238,323	+		DZA65_RS14850	0.75	-1.3
3,238,323	+		DZA65_RS14850	0.75	+0.3
3,238,324	-		DZA65_RS14850	0.75	+0.1
3,238,476	+		DZA65_RS14850	0.82	-0.5
3,238,477	-		DZA65_RS14850	0.82	-1.2
3,238,482	+		DZA65_RS14850	0.82	+0.4
3,238,483	-		DZA65_RS14850	0.82	+2.4
3,238,520	+		DZA65_RS14850	0.83	-0.1
3,238,599	+		DZA65_RS14850	0.87	+0.4
3,238,599	+		DZA65_RS14850	0.87	-0.3
3,238,600	-		DZA65_RS14850	0.87	+0.2
3,238,661	+		DZA65_RS14850	0.90	+0.4
3,238,661	+		DZA65_RS14850	0.90	+1.4
3,238,662	-		DZA65_RS14850	0.90	-0.3
3,238,713	-				-0.3
3,238,763	-				+0.0
3,238,763	-				-0.3
3,238,829	+				+0.8
3,238,829	+				+1.4
3,238,829	+				-0.3
3,238,829	+				-1.4
3,238,829	+				-1.0
3,238,829	+				-0.1
3,238,829	+				+0.4
3,238,830	-				+0.8
3,238,830	-				+0.4
3,238,830	-				-0.9
3,238,830	-				+1.0
3,238,830	-				-0.0
3,238,830	-				-0.0
3,238,864	-				-0.3
3,238,902	+				-0.2
3,238,902	+				-0.6
3,238,902	+				-1.0
3,238,902	+				+1.1
3,238,902	+				-1.7
3,238,903	-				+0.3
3,238,903	-				-0.0
3,238,903	-				-1.1
3,238,903	-				+1.8
3,238,903	-				-0.3
3,238,903	-				+0.2
3,238,903	-				+0.4
3,238,903	-				+1.7
3,238,903	-				-0.9
3,238,903	-				-0.3
3,238,903	-				-0.8
3,238,903	-				+0.7
3,238,906	+				-0.8
3,238,906	+				-0.6
3,238,906	+				+0.8
3,238,906	+				+0.5
3,238,906	+				-0.5
3,238,906	+				-0.6
3,238,906	+				-0.0
3,238,906	+				-0.3
3,238,906	+				+0.0
3,238,906	+				-1.4
3,238,906	+				-1.2
3,238,906	+				+1.1
3,238,906	+				+0.4
3,238,907	-				-0.2
3,238,907	-				-0.8
3,238,907	-				-1.2
3,238,907	-				+0.7
3,238,907	-				-2.9
3,238,907	-				+0.0
3,238,907	-				+2.7
3,238,907	-				+1.6
3,238,907	-				+2.0
3,238,907	-				+0.7
3,238,907	-				+0.0
3,238,907	-				-1.9
3,238,907	-				+0.2
3,238,908	+				-2.2
3,238,908	+				+0.4
3,238,908	+				-2.6
3,238,908	+				+0.1
3,238,908	+				-0.8
3,238,908	+				+0.1
3,238,908	+				-0.8
3,238,908	+				-1.6
3,238,908	+				-0.4
3,238,909	-				+0.6
3,238,909	-				-0.5
3,238,909	-				-1.9
3,238,909	-				+1.4
3,238,909	-				-0.9
3,238,909	-				+0.4
3,238,909	-				+1.5
3,238,909	-				+0.1
3,238,909	-				+0.6
3,238,909	-				+1.1
3,238,909	-				-2.1
3,238,914	+				-1.2
3,238,914	+				+1.0
3,238,914	+				+0.7
3,238,914	+				-1.1
3,238,914	+				+0.2
3,238,914	+				-0.1
3,238,915	-				-1.0
3,238,915	-				-0.8
3,238,915	-				+0.2
3,238,918	+				-0.2
3,238,918	+				-0.3
3,238,918	+				+0.6
3,238,918	+				-0.0
3,238,918	+				+0.2
3,238,918	+				-0.5
3,238,919	-				-0.3
3,238,919	-				-0.4
3,238,919	-				-0.3
3,238,926	+				-1.8
3,238,926	+				-2.0
3,238,927	-				-0.0
3,238,927	-				+0.4
3,238,927	-				-0.9
3,238,938	+				+0.6
3,238,950	+				+0.9
3,238,950	+				+0.6
3,238,950	+				-1.2
3,238,950	+				-0.1
3,238,950	+				-0.3
3,238,950	+				-0.6
3,238,950	+				-0.3
3,238,950	+				+0.6
3,238,951	-				-0.4
3,238,951	-				-1.8
3,238,951	-				+2.2
3,238,951	-				-0.8
3,238,951	-				+0.4
3,238,951	-				-1.6
3,238,952	+				-1.0
3,238,952	+				+0.5
3,238,952	+				-0.6
3,238,952	+				+0.4
3,238,952	+				-0.5
3,238,952	+				+0.1
3,238,952	+				-0.1
3,238,952	+				-0.6
3,238,952	+				-1.6
3,238,952	+				-2.0
3,238,952	+				-0.6
3,238,953	-				-0.6
3,238,953	-				+0.3
3,238,953	-				+0.7
3,238,953	-				+0.1
3,238,953	-				-1.3
3,238,953	-				+1.4
3,238,953	-				+0.9
3,238,954	+				+0.6
3,238,954	+				+0.4
3,238,954	+				+0.6
3,238,954	+				-0.5
3,238,954	+				-0.4
3,238,954	+				-0.6
3,238,954	+				-0.8
3,238,954	+				-1.2
3,238,955	-				+1.0
3,238,955	-				-1.1
3,238,955	-				-0.1
3,238,955	-				+1.2
3,238,955	-				-0.2
3,238,964	-				+0.2
3,238,994	-				-0.6
3,238,994	-				-1.2
3,239,018	-				-1.4
3,239,052	+				-0.9
3,239,172	+				-0.1
3,239,173	-				-0.2
3,239,173	-				+0.2
3,239,173	-				-0.9
3,239,177	+				-1.8
3,239,177	+				-0.4
3,239,178	-				+0.4
3,239,318	+				+0.8
3,239,319	-				-0.3
3,239,319	-				+2.7
3,239,319	-				-0.4
3,239,319	-				+0.4
3,239,522	+		DZA65_RS14855	0.27	-0.9
3,239,522	+		DZA65_RS14855	0.27	+0.2
3,239,523	-		DZA65_RS14855	0.27	+1.4
3,239,523	-		DZA65_RS14855	0.27	+0.1
3,239,873	+		DZA65_RS14855	0.61	-1.0
3,239,874	-		DZA65_RS14855	0.61	+0.1
3,239,874	-		DZA65_RS14855	0.61	-2.2
3,239,976	+		DZA65_RS14855	0.71	+0.4
3,239,976	+		DZA65_RS14855	0.71	+1.0
3,239,977	-		DZA65_RS14855	0.71	-1.6
3,239,977	-		DZA65_RS14855	0.71	+0.8
3,240,075	+		DZA65_RS14855	0.81	-1.0
3,240,075	+		DZA65_RS14855	0.81	+0.8
3,240,075	+		DZA65_RS14855	0.81	+0.4
3,240,075	+		DZA65_RS14855	0.81	-0.8
3,240,075	+		DZA65_RS14855	0.81	-1.1
3,240,075	+		DZA65_RS14855	0.81	-2.6
3,240,075	+		DZA65_RS14855	0.81	+0.8
3,240,075	+		DZA65_RS14855	0.81	-0.5
3,240,075	+		DZA65_RS14855	0.81	-0.7
3,240,076	-		DZA65_RS14855	0.81	-0.8
3,240,076	-		DZA65_RS14855	0.81	+0.4
3,240,076	-		DZA65_RS14855	0.81	-1.4
3,240,076	-		DZA65_RS14855	0.81	-0.6
3,240,076	-				-0.6
3,240,076	-		DZA65_RS14855	0.81	-0.6
3,240,197	+				-0.6
3,240,197	+				-0.2
3,240,197	+				+0.4
3,240,197	+				-2.4
3,240,198	-				+0.1
3,240,198	-				+0.4
3,240,257	+				-0.3
3,240,257	+				-0.6
3,240,258	-				-2.6
3,240,258	-				-0.3
3,240,258	-				+1.5
3,240,297	+				-2.3
3,240,298	-				-2.8
3,240,298	-				+1.6
3,240,298	-				-0.9
3,240,298	-				+0.4
3,240,300	+				+0.0
3,240,300	+				-0.2
3,240,300	+				+0.6
3,240,301	-				+0.2
3,240,301	-				-0.3
3,240,301	-				-0.9
3,240,359	-				-1.2
3,240,395	-		DZA65_RS14860	0.11	-0.1
3,240,395	-		DZA65_RS14860	0.11	-1.6
3,240,410	+		DZA65_RS14860	0.12	-0.8
3,240,463	+		DZA65_RS14860	0.17	+0.2
3,240,492	+		DZA65_RS14860	0.20	-1.1
3,240,492	+		DZA65_RS14860	0.20	+0.7
3,240,619	+		DZA65_RS14860	0.31	+1.1
3,240,620	-		DZA65_RS14860	0.31	-0.8
3,241,021	-		DZA65_RS14860	0.67	-0.1
3,241,090	+		DZA65_RS14860	0.73	+0.8
3,241,090	+		DZA65_RS14860	0.73	+0.0
3,241,091	-		DZA65_RS14860	0.73	+2.9
3,241,105	+		DZA65_RS14860	0.75	+1.0