Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14715

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,199,512	+		DZA65_RS14705	0.88	-0.6
3,199,512	+		DZA65_RS14705	0.88	+1.2
3,199,576	+				-0.2
3,199,577	-				+0.2
3,199,592	+				+0.6
3,199,592	+				-0.6
3,199,592	+				+1.2
3,199,592	+				-1.4
3,199,593	-				+0.2
3,199,593	-				+0.9
3,199,593	-				+0.8
3,199,593	-				-0.3
3,199,593	-				+0.4
3,199,593	-				-0.4
3,199,602	+				+0.7
3,199,630	-				+0.7
3,199,651	-				+1.3
3,199,691	-				+0.1
3,199,748	+				+0.6
3,199,748	+				-0.8
3,199,748	+				+0.3
3,199,748	+				+0.6
3,199,749	-				-0.6
3,199,749	-				+0.1
3,199,749	-				+0.4
3,199,749	-				-1.2
3,199,843	-				+0.4
3,199,844	+				+0.6
3,199,845	-				-0.6
3,199,847	-				+0.4
3,200,020	-				-0.6
3,200,046	-				-0.2
3,200,046	-				+1.3
3,200,050	-				-0.2
3,200,050	-				-0.9
3,200,050	-				-0.1
3,200,050	-				+1.2
3,200,050	-				+0.2
3,200,055	+				-0.6
3,200,055	+				-0.4
3,200,056	-				-0.3
3,200,056	-				+0.6
3,200,180	+				-0.6
3,200,192	+				-1.6
3,200,192	+				-1.6
3,200,192	+				+0.4
3,200,192	+				+0.3
3,200,312	+		DZA65_RS14710	0.37	-0.6
3,200,312	+		DZA65_RS14710	0.37	+0.4
3,200,312	+		DZA65_RS14710	0.37	-1.3
3,200,313	-		DZA65_RS14710	0.37	-0.0
3,200,313	-		DZA65_RS14710	0.37	-0.2
3,200,313	-		DZA65_RS14710	0.37	-0.9
3,200,358	-		DZA65_RS14710	0.52	-1.3
3,200,403	-		DZA65_RS14710	0.67	-3.2
3,200,521	+				-0.2
3,200,522	-				-1.2
3,200,592	+		DZA65_RS14715	0.11	-0.9
3,200,592	+		DZA65_RS14715	0.11	-1.6
3,200,592	+		DZA65_RS14715	0.11	-1.2
3,200,592	+		DZA65_RS14715	0.11	-0.9
3,200,592	+		DZA65_RS14715	0.11	-2.6
3,200,592	+		DZA65_RS14715	0.11	-0.1
3,200,592	+		DZA65_RS14715	0.11	-0.1
3,200,592	+		DZA65_RS14715	0.11	-1.1
3,200,593	-		DZA65_RS14715	0.11	-0.9
3,200,593	-		DZA65_RS14715	0.11	+0.0
3,200,593	-		DZA65_RS14715	0.11	-0.2
3,200,593	-		DZA65_RS14715	0.11	+1.2
3,200,593	-		DZA65_RS14715	0.11	+0.1
3,200,595	+		DZA65_RS14715	0.11	+0.4
3,200,595	+		DZA65_RS14715	0.11	-0.0
3,200,595	+		DZA65_RS14715	0.11	+0.6
3,200,595	+		DZA65_RS14715	0.11	-0.6
3,200,595	+		DZA65_RS14715	0.11	-1.6
3,200,596	-		DZA65_RS14715	0.12	-0.2
3,200,596	-		DZA65_RS14715	0.12	-0.6
3,200,596	-		DZA65_RS14715	0.12	-1.2
3,200,596	-		DZA65_RS14715	0.12	-0.4
3,200,747	-		DZA65_RS14715	0.28	-0.9
3,201,035	-		DZA65_RS14715	0.61	-0.4
3,201,278	+		DZA65_RS14715	0.88	+0.2
3,201,382	+				+0.3
3,201,430	+				+0.4
3,201,430	+				-0.4
3,201,430	+				-1.8
3,201,434	+				-0.2
3,201,434	+				+0.1
3,201,434	+				+0.1
3,201,435	-				-0.6
3,201,435	-				-0.5
3,201,438	+				-3.4
3,201,438	+				+0.2
3,201,438	+				-0.2
3,201,439	-				+0.1
3,201,439	-				+0.4
3,201,439	-				+0.1
3,201,439	-				-0.5
3,201,458	+				+0.7
3,201,458	+				+0.4
3,201,459	-				+0.6
3,201,459	-				-0.8
3,201,459	-				+0.6
3,201,462	+				-0.1
3,201,462	+				+0.4
3,201,462	+				-0.0
3,201,462	+				+0.3
3,201,463	-				-0.8
3,201,463	-				-0.9
3,201,463	-				-0.8
3,201,497	+				-1.2
3,201,498	-				-0.1
3,201,572	+				-0.0
3,201,572	+				+1.0
3,201,572	+				-0.3
3,201,572	+				+0.4
3,201,572	+				+1.1
3,201,572	+				-1.2
3,201,572	+				+0.6
3,201,572	+				-2.8
3,201,572	+				+0.6
3,201,572	+				-1.4
3,201,572	+				+0.2
3,201,572	+				-2.2
3,201,572	+				+1.4
3,201,572	+				+0.2
3,201,573	-				+1.4
3,201,573	-				-0.5
3,201,573	-				+1.4
3,201,573	-				-2.3
3,201,573	-				-0.4
3,201,573	-				-0.6
3,201,573	-				-1.3
3,201,573	-				+1.1
3,201,573	-				-0.4
3,201,573	-				-1.0
3,201,573	-				+0.7
3,201,573	-				+0.8
3,201,573	-				-0.7
3,201,626	+				-0.1
3,201,626	+				+1.0
3,201,627	-				-0.2
3,201,629	+				-0.1
3,201,654	+				+0.3
3,201,670	+				-1.9
3,201,670	+				+0.4
3,201,671	-				-0.4
3,201,681	+				-2.4
3,201,681	+				+0.4
3,201,682	-				-1.9
3,201,682	-				+0.2
3,201,682	-				+0.1
3,201,694	-				+0.4
3,201,700	+				+0.4
3,201,701	-				-1.5
3,201,703	+				-0.6
3,201,729	+				-0.8
3,201,730	-				-0.6
3,201,730	-				+0.1
3,201,730	-				+0.6
3,201,787	-				+3.0
3,201,787	-				-0.3
3,201,809	+				-0.1
3,201,912	+		DZA65_RS14720	0.15	+1.1
3,201,912	+		DZA65_RS14720	0.15	-0.4
3,201,912	+		DZA65_RS14720	0.15	+0.6
3,201,919	+		DZA65_RS14720	0.16	+0.6
3,201,920	-		DZA65_RS14720	0.16	-0.9
3,201,920	-		DZA65_RS14720	0.16	-0.9
3,201,982	+		DZA65_RS14720	0.21	-0.1
3,201,994	+		DZA65_RS14720	0.22	+0.1
3,202,045	+		DZA65_RS14720	0.27	-0.2
3,202,046	-		DZA65_RS14720	0.27	-0.9
3,202,046	-		DZA65_RS14720	0.27	+1.3
3,202,046	-		DZA65_RS14720	0.27	-0.1
3,202,086	+		DZA65_RS14720	0.30	+0.6
3,202,086	+		DZA65_RS14720	0.30	-1.4
3,202,086	+		DZA65_RS14720	0.30	-2.4
3,202,086	+		DZA65_RS14720	0.30	-0.8
3,202,090	+				+0.4
3,202,090	+		DZA65_RS14720	0.31	+0.4
3,202,090	+		DZA65_RS14720	0.31	+2.0
3,202,090	+		DZA65_RS14720	0.31	+1.1
3,202,090	+		DZA65_RS14720	0.31	-0.9
3,202,090	+		DZA65_RS14720	0.31	-0.6
3,202,091	-		DZA65_RS14720	0.31	-0.2
3,202,091	-		DZA65_RS14720	0.31	-0.2
3,202,091	-		DZA65_RS14720	0.31	+0.8
3,202,114	+		DZA65_RS14720	0.33	-0.8
3,202,114	+		DZA65_RS14720	0.33	+0.6
3,202,114	+		DZA65_RS14720	0.33	-0.1
3,202,114	+		DZA65_RS14720	0.33	-0.8
3,202,114	+		DZA65_RS14720	0.33	-0.5
3,202,114	+		DZA65_RS14720	0.33	+0.4
3,202,114	+		DZA65_RS14720	0.33	-0.9
3,202,114	+		DZA65_RS14720	0.33	-0.6
3,202,114	+		DZA65_RS14720	0.33	+0.6
3,202,115	-		DZA65_RS14720	0.33	+0.4
3,202,115	-		DZA65_RS14720	0.33	+0.1
3,202,115	-		DZA65_RS14720	0.33	+1.0
3,202,115	-		DZA65_RS14720	0.33	+0.7
3,202,115	-		DZA65_RS14720	0.33	-0.4
3,202,115	-		DZA65_RS14720	0.33	-1.0
3,202,115	-		DZA65_RS14720	0.33	-1.1
3,202,115	-		DZA65_RS14720	0.33	-1.2
3,202,115	-		DZA65_RS14720	0.33	+0.4
3,202,115	-		DZA65_RS14720	0.33	-0.3
3,202,115	-		DZA65_RS14720	0.33	+0.2
3,202,115	-		DZA65_RS14720	0.33	+0.4
3,202,115	-		DZA65_RS14720	0.33	+0.8
3,202,115	-		DZA65_RS14720	0.33	-0.0
3,202,115	-		DZA65_RS14720	0.33	-0.2
3,202,115	-		DZA65_RS14720	0.33	+0.1
3,202,157	+		DZA65_RS14720	0.36	-1.6
3,202,158	-		DZA65_RS14720	0.36	-0.6
3,202,233	+		DZA65_RS14720	0.43	-0.6
3,202,233	+		DZA65_RS14720	0.43	+0.3
3,202,234	-		DZA65_RS14720	0.43	+2.6
3,202,234	-		DZA65_RS14720	0.43	+0.4
3,202,234	-		DZA65_RS14720	0.43	+0.0
3,202,234	-		DZA65_RS14720	0.43	+0.3
3,202,345	+		DZA65_RS14720	0.52	-0.0
3,202,346	-		DZA65_RS14720	0.52	+1.0