Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12140

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,591,209	+				-0.0
2,591,240	+				+0.3
2,591,241	-				+0.1
2,591,241	-				+0.3
2,591,247	-				-0.5
2,591,247	-				+0.4
2,591,344	+				-0.1
2,591,345	-				+1.9
2,591,345	-				-0.4
2,591,345	-				+0.2
2,591,354	+				-0.8
2,591,354	+				-0.5
2,591,354	+				-1.2
2,591,354	+				-0.6
2,591,354	+				-0.5
2,591,355	-				+0.2
2,591,355	-				-1.1
2,591,355	-				-2.8
2,591,355	-				+0.7
2,591,355	-				+0.7
2,591,355	-				-0.5
2,591,535	-		DZA65_RS12130	0.40	-0.1
2,591,540	+		DZA65_RS12130	0.41	+0.2
2,591,540	+		DZA65_RS12130	0.41	-0.8
2,591,540	+		DZA65_RS12130	0.41	+0.2
2,591,541	-		DZA65_RS12130	0.41	+0.2
2,591,541	-		DZA65_RS12130	0.41	-0.3
2,591,541	-		DZA65_RS12130	0.41	-0.1
2,591,614	-		DZA65_RS12130	0.58	+0.2
2,591,626	+		DZA65_RS12130	0.60	+0.7
2,591,626	+		DZA65_RS12130	0.60	+0.1
2,591,626	+		DZA65_RS12130	0.60	-0.1
2,591,626	+		DZA65_RS12130	0.60	-0.3
2,591,627	-		DZA65_RS12130	0.61	+0.6
2,591,866	+		DZA65_RS12135	0.36	-0.6
2,591,867	-		DZA65_RS12135	0.36	-0.4
2,591,885	-		DZA65_RS12135	0.44	+0.3
2,591,893	+		DZA65_RS12135	0.48	+0.6
2,591,893	+		DZA65_RS12135	0.48	-2.3
2,591,893	+		DZA65_RS12135	0.48	-0.3
2,591,893	+		DZA65_RS12135	0.48	-0.3
2,591,893	+		DZA65_RS12135	0.48	+0.5
2,591,893	+		DZA65_RS12135	0.48	-0.4
2,591,893	+		DZA65_RS12135	0.48	+2.3
2,591,893	+		DZA65_RS12135	0.48	+1.4
2,591,893	+		DZA65_RS12135	0.48	-0.5
2,591,894	-		DZA65_RS12135	0.48	-1.8
2,591,894	-		DZA65_RS12135	0.48	+0.8
2,591,894	-		DZA65_RS12135	0.48	-1.2
2,591,894	-		DZA65_RS12135	0.48	+0.5
2,591,894	-		DZA65_RS12135	0.48	-0.2
2,591,894	-		DZA65_RS12135	0.48	-1.4
2,591,894	-		DZA65_RS12135	0.48	+0.8
2,591,894	-		DZA65_RS12135	0.48	-1.8
2,591,897	+		DZA65_RS12135	0.50	+0.8
2,591,993	+				-0.8
2,591,993	+				-0.8
2,591,994	-				+0.5
2,591,994	-				-0.8
2,591,994	-				+0.2
2,591,994	-				-1.1
2,591,994	-				-0.3
2,591,994	-				-0.7
2,591,994	-				+0.9
2,592,019	+				+0.7
2,592,041	-				-1.0
2,592,041	-				+0.2
2,592,041	-				-0.4
2,592,041	-				-0.1
2,592,046	+				+0.6
2,592,046	+				-0.3
2,592,046	+				-0.8
2,592,046	+				+1.2
2,592,047	-				-2.1
2,592,047	-				-2.1
2,592,047	-				-0.0
2,592,047	-				+1.2
2,592,047	-				-2.1
2,592,047	-				+2.8
2,592,055	+				-0.4
2,592,055	+				-0.4
2,592,055	+				+0.4
2,592,055	+				+1.8
2,592,055	+				-0.9
2,592,055	+				-0.4
2,592,056	-				-0.2
2,592,056	-				-0.3
2,592,056	-				-0.6
2,592,056	-				-0.7
2,592,056	-				+0.2
2,592,056	-				-1.8
2,592,163	-				-0.7
2,592,210	+				+0.1
2,592,210	+				+1.9
2,592,210	+				-0.0
2,592,211	-				+1.4
2,592,211	-				-1.2
2,592,254	+				-0.8
2,592,290	+				-0.6
2,592,290	+				+0.6
2,592,290	+				-0.2
2,592,291	-				-2.1
2,592,291	-				+0.6
2,592,291	-				-0.5
2,592,364	+				-1.0
2,592,365	-				-0.4
2,592,394	+				-0.5
2,592,394	+				+0.6
2,592,395	-				+0.5
2,592,398	-				-0.3
2,592,507	+		DZA65_RS12140	0.12	-0.0
2,592,507	+		DZA65_RS12140	0.12	+0.6
2,592,507	+		DZA65_RS12140	0.12	-0.6
2,592,507	+		DZA65_RS12140	0.12	-0.3
2,592,507	+		DZA65_RS12140	0.12	+0.9
2,592,508	-		DZA65_RS12140	0.12	-0.3
2,592,508	-		DZA65_RS12140	0.12	+1.5
2,592,510	+		DZA65_RS12140	0.12	-0.0
2,592,511	-		DZA65_RS12140	0.12	-1.4
2,592,511	-		DZA65_RS12140	0.12	-0.2
2,592,511	-		DZA65_RS12140	0.12	+0.4
2,592,511	-		DZA65_RS12140	0.12	-0.1
2,592,511	-		DZA65_RS12140	0.12	+0.6
2,592,511	-		DZA65_RS12140	0.12	+0.1
2,592,528	+		DZA65_RS12140	0.12	-0.4
2,592,528	+		DZA65_RS12140	0.12	+0.2
2,592,528	+		DZA65_RS12140	0.12	-1.3
2,592,528	+				-0.4
2,592,528	+		DZA65_RS12140	0.12	+1.2
2,592,528	+		DZA65_RS12140	0.12	-0.0
2,592,528	+		DZA65_RS12140	0.12	-0.0
2,592,529	-		DZA65_RS12140	0.12	-0.4
2,592,529	-		DZA65_RS12140	0.12	-0.5
2,592,529	-		DZA65_RS12140	0.12	-0.3
2,592,529	-		DZA65_RS12140	0.12	+0.7
2,592,529	-		DZA65_RS12140	0.12	+1.5
2,592,529	-		DZA65_RS12140	0.12	+0.9
2,592,529	-		DZA65_RS12140	0.12	-0.4
2,592,529	-				+1.5
2,592,532	+		DZA65_RS12140	0.12	-0.5
2,592,532	+		DZA65_RS12140	0.12	-0.1
2,592,532	+		DZA65_RS12140	0.12	-0.8
2,592,532	+		DZA65_RS12140	0.12	+0.5
2,592,532	+		DZA65_RS12140	0.12	+0.7
2,592,532	+		DZA65_RS12140	0.12	+0.9
2,592,532	+		DZA65_RS12140	0.12	+0.3
2,592,532	+		DZA65_RS12140	0.12	+0.1
2,592,532	+		DZA65_RS12140	0.12	-0.6
2,592,533	-		DZA65_RS12140	0.13	-0.1
2,592,533	-		DZA65_RS12140	0.13	-1.8
2,592,533	-		DZA65_RS12140	0.13	+0.5
2,592,533	-		DZA65_RS12140	0.13	-0.5
2,592,533	-		DZA65_RS12140	0.13	-1.4
2,592,533	-		DZA65_RS12140	0.13	-0.8
2,592,533	-		DZA65_RS12140	0.13	-0.6
2,592,533	-		DZA65_RS12140	0.13	-2.4
2,592,533	-		DZA65_RS12140	0.13	-0.1
2,592,533	-		DZA65_RS12140	0.13	-1.2
2,592,533	-		DZA65_RS12140	0.13	-2.0
2,592,556	+		DZA65_RS12140	0.13	+0.1
2,592,556	+		DZA65_RS12140	0.13	+1.2
2,592,576	+		DZA65_RS12140	0.14	-1.5
2,592,576	+		DZA65_RS12140	0.14	+0.3
2,592,576	+		DZA65_RS12140	0.14	+0.2
2,592,576	+		DZA65_RS12140	0.14	+1.2
2,592,577	-		DZA65_RS12140	0.14	-2.4
2,592,577	-		DZA65_RS12140	0.14	+2.6
2,592,577	-		DZA65_RS12140	0.14	+0.1
2,592,577	-		DZA65_RS12140	0.14	-0.2
2,592,577	-		DZA65_RS12140	0.14	+1.8
2,592,610	-		DZA65_RS12140	0.15	-0.7
2,592,610	-		DZA65_RS12140	0.15	-0.8
2,592,610	-		DZA65_RS12140	0.15	+0.3
2,592,618	-		DZA65_RS12140	0.16	-0.3
2,592,618	-		DZA65_RS12140	0.16	+0.0
2,592,648	+		DZA65_RS12140	0.17	-0.3
2,592,648	+		DZA65_RS12140	0.17	+0.2
2,592,648	+		DZA65_RS12140	0.17	-0.5
2,592,649	-		DZA65_RS12140	0.17	+1.1
2,592,703	+		DZA65_RS12140	0.19	-0.2
2,592,713	+		DZA65_RS12140	0.19	+1.1
2,592,713	+		DZA65_RS12140	0.19	-0.5
2,592,753	+		DZA65_RS12140	0.21	+1.8
2,592,788	-		DZA65_RS12140	0.22	+1.2
2,592,912	+		DZA65_RS12140	0.27	+0.2
2,592,912	+		DZA65_RS12140	0.27	-0.8
2,592,912	+		DZA65_RS12140	0.27	-0.2
2,592,912	+		DZA65_RS12140	0.27	+1.3
2,592,912	+		DZA65_RS12140	0.27	-0.3
2,592,912	+		DZA65_RS12140	0.27	-0.5
2,592,912	+		DZA65_RS12140	0.27	+0.3
2,592,912	+		DZA65_RS12140	0.27	+2.0
2,592,912	+		DZA65_RS12140	0.27	-0.5
2,592,912	+		DZA65_RS12140	0.27	+1.1
2,592,912	+		DZA65_RS12140	0.27	-0.4
2,592,913	-		DZA65_RS12140	0.27	-0.3
2,592,913	-		DZA65_RS12140	0.27	-0.6
2,592,913	-		DZA65_RS12140	0.27	-0.2
2,592,913	-		DZA65_RS12140	0.27	-0.5
2,592,913	-		DZA65_RS12140	0.27	-0.0
2,592,913	-		DZA65_RS12140	0.27	-1.0
2,592,913	-		DZA65_RS12140	0.27	+0.4
2,592,930	+				+0.8
2,592,930	+		DZA65_RS12140	0.28	+0.3
2,592,930	+		DZA65_RS12140	0.28	-0.8
2,592,930	+		DZA65_RS12140	0.28	-1.1
2,592,930	+		DZA65_RS12140	0.28	+1.0
2,592,930	+		DZA65_RS12140	0.28	-2.4
2,592,930	+		DZA65_RS12140	0.28	-1.2
2,592,930	+		DZA65_RS12140	0.28	+0.2
2,592,931	-		DZA65_RS12140	0.28	-0.3
2,592,931	-		DZA65_RS12140	0.28	+1.1
2,592,931	-		DZA65_RS12140	0.28	+0.8
2,592,931	-		DZA65_RS12140	0.28	+0.5
2,592,931	-		DZA65_RS12140	0.28	-1.2
2,592,931	-		DZA65_RS12140	0.28	-0.3
2,592,931	-		DZA65_RS12140	0.28	-0.3
2,592,997	+		DZA65_RS12140	0.30	+2.0
2,592,997	+		DZA65_RS12140	0.30	-1.0
2,592,998	-		DZA65_RS12140	0.30	+0.0
2,592,998	-		DZA65_RS12140	0.30	-0.5
2,592,998	-		DZA65_RS12140	0.30	+1.9
2,593,004	+		DZA65_RS12140	0.31	-0.4
2,593,005	-		DZA65_RS12140	0.31	-0.7
2,593,005	-		DZA65_RS12140	0.31	+1.5
2,593,005	-		DZA65_RS12140	0.31	-0.3
2,593,005	-		DZA65_RS12140	0.31	+0.7
2,593,009	+		DZA65_RS12140	0.31	-0.1
2,593,009	+		DZA65_RS12140	0.31	-1.1
2,593,009	+		DZA65_RS12140	0.31	+0.0
2,593,010	-		DZA65_RS12140	0.31	-0.1
2,593,010	-		DZA65_RS12140	0.31	+0.0
2,593,010	-		DZA65_RS12140	0.31	+1.2
2,593,038	+		DZA65_RS12140	0.32	+0.1
2,593,039	-		DZA65_RS12140	0.32	-0.2
2,593,039	-		DZA65_RS12140	0.32	-0.4
2,593,054	+		DZA65_RS12140	0.33	-0.5
2,593,055	-		DZA65_RS12140	0.33	-1.0
2,593,218	+		DZA65_RS12140	0.39	-0.6
2,593,218	+		DZA65_RS12140	0.39	-0.7
2,593,218	+		DZA65_RS12140	0.39	-2.1
2,593,219	-		DZA65_RS12140	0.39	-0.8
2,593,219	-		DZA65_RS12140	0.39	+0.8
2,593,219	-		DZA65_RS12140	0.39	+0.4
2,593,219	-		DZA65_RS12140	0.39	+1.4
2,593,219	-		DZA65_RS12140	0.39	-0.1
2,593,235	+		DZA65_RS12140	0.40	+0.1
2,593,235	+		DZA65_RS12140	0.40	-1.4
2,593,235	+		DZA65_RS12140	0.40	-0.3
2,593,235	+		DZA65_RS12140	0.40	+1.5
2,593,235	+		DZA65_RS12140	0.40	+0.5
2,593,235	+		DZA65_RS12140	0.40	-0.8
2,593,235	+		DZA65_RS12140	0.40	+0.5
2,593,235	+		DZA65_RS12140	0.40	+0.2
2,593,235	+		DZA65_RS12140	0.40	-0.4
2,593,235	+		DZA65_RS12140	0.40	+0.6
2,593,235	+		DZA65_RS12140	0.40	+0.9
2,593,235	+		DZA65_RS12140	0.40	-1.2
2,593,235	+		DZA65_RS12140	0.40	-0.8
2,593,235	+		DZA65_RS12140	0.40	+0.0
2,593,236	-		DZA65_RS12140	0.40	+0.0
2,593,236	-		DZA65_RS12140	0.40	+0.4
2,593,236	-		DZA65_RS12140	0.40	-0.4
2,593,240	+		DZA65_RS12140	0.40	-0.2
2,593,240	+		DZA65_RS12140	0.40	-1.1
2,593,240	+		DZA65_RS12140	0.40	+0.0
2,593,240	+		DZA65_RS12140	0.40	-0.3
2,593,241	-		DZA65_RS12140	0.40	+0.5
2,593,241	-		DZA65_RS12140	0.40	-0.1
2,593,244	-		DZA65_RS12140	0.40	-1.4
2,593,337	+		DZA65_RS12140	0.44	-1.0
2,593,358	+		DZA65_RS12140	0.44	-0.2
2,593,358	+				+0.6
2,593,358	+		DZA65_RS12140	0.44	+0.3
2,593,359	-		DZA65_RS12140	0.44	-2.1
2,593,359	-		DZA65_RS12140	0.44	-0.8
2,593,426	-		DZA65_RS12140	0.47	+0.2
2,593,484	-		DZA65_RS12140	0.49	+1.8
2,593,484	-		DZA65_RS12140	0.49	+0.4
2,593,625	+		DZA65_RS12140	0.55	+2.8
2,593,638	+		DZA65_RS12140	0.55	-0.8
2,593,638	+		DZA65_RS12140	0.55	-0.2
2,593,638	+		DZA65_RS12140	0.55	-0.3
2,593,638	+		DZA65_RS12140	0.55	-0.1
2,593,638	+		DZA65_RS12140	0.55	+2.7
2,593,638	+		DZA65_RS12140	0.55	+0.7
2,593,638	+		DZA65_RS12140	0.55	+0.7
2,593,638	+		DZA65_RS12140	0.55	+1.5
2,593,638	+		DZA65_RS12140	0.55	+0.9
2,593,638	+		DZA65_RS12140	0.55	-1.0
2,593,638	+		DZA65_RS12140	0.55	+0.5
2,593,638	+		DZA65_RS12140	0.55	-0.1
2,593,639	-		DZA65_RS12140	0.55	+0.6
2,593,639	-		DZA65_RS12140	0.55	-0.2
2,593,639	-		DZA65_RS12140	0.55	-2.6
2,593,639	-		DZA65_RS12140	0.55	-0.1
2,593,639	-		DZA65_RS12140	0.55	+0.2
2,593,642	+		DZA65_RS12140	0.55	+0.6
2,593,642	+		DZA65_RS12140	0.55	+0.7
2,593,660	+		DZA65_RS12140	0.56	-0.8
2,593,660	+		DZA65_RS12140	0.56	-1.0
2,593,712	+		DZA65_RS12140	0.58	-0.2
2,593,713	-		DZA65_RS12140	0.58	+0.3
2,593,727	+		DZA65_RS12140	0.59	+0.5
2,593,727	+				-1.4
2,593,728	-		DZA65_RS12140	0.59	-0.6
2,593,763	+		DZA65_RS12140	0.60	+0.7
2,593,763	+		DZA65_RS12140	0.60	+0.4
2,593,780	-		DZA65_RS12140	0.61	+2.0
2,593,796	+		DZA65_RS12140	0.61	+0.1
2,593,797	-		DZA65_RS12140	0.61	-0.0
2,593,821	+		DZA65_RS12140	0.62	+0.8
2,593,821	+		DZA65_RS12140	0.62	+0.2
2,593,821	+		DZA65_RS12140	0.62	-0.4
2,593,821	+		DZA65_RS12140	0.62	-0.0
2,593,821	+		DZA65_RS12140	0.62	-0.5
2,593,821	+		DZA65_RS12140	0.62	-0.5
2,593,821	+		DZA65_RS12140	0.62	+0.4
2,593,821	+		DZA65_RS12140	0.62	+0.4
2,593,822	-		DZA65_RS12140	0.62	-0.3
2,593,822	-		DZA65_RS12140	0.62	-0.2
2,593,822	-		DZA65_RS12140	0.62	+0.7
2,593,822	-		DZA65_RS12140	0.62	-0.6
2,593,822	-		DZA65_RS12140	0.62	-0.7
2,593,822	-				+1.8
2,593,822	-		DZA65_RS12140	0.62	+0.5
2,593,822	-		DZA65_RS12140	0.62	-0.3
2,593,822	-		DZA65_RS12140	0.62	-0.6
2,593,822	-		DZA65_RS12140	0.62	-1.1
2,593,822	-		DZA65_RS12140	0.62	+0.2
2,593,822	-		DZA65_RS12140	0.62	+0.2
2,593,822	-		DZA65_RS12140	0.62	+1.3
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2,593,832	+		DZA65_RS12140	0.63	+0.1
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2,593,872	+		DZA65_RS12140	0.64	-0.6
2,593,872	+		DZA65_RS12140	0.64	-1.4
2,593,872	+		DZA65_RS12140	0.64	-1.1
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2,593,996	+				+0.2
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2,594,461	+		DZA65_RS12140	0.87	-1.1
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2,594,611	+				-2.6
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2,595,387	+				-1.1
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