Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11315

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,404,141	+		DZA65_RS11305	0.88	-1.2
2,404,142	-		DZA65_RS11305	0.88	-0.1
2,404,142	-		DZA65_RS11305	0.88	-1.3
2,404,142	-		DZA65_RS11305	0.88	+0.4
2,404,153	-		DZA65_RS11305	0.89	+0.5
2,404,733	+		DZA65_RS11310	0.57	-1.1
2,404,733	+		DZA65_RS11310	0.57	-0.6
2,404,733	+		DZA65_RS11310	0.57	-0.5
2,404,734	-		DZA65_RS11310	0.57	-0.7
2,404,944	+		DZA65_RS11310	0.82	-0.6
2,404,944	+		DZA65_RS11310	0.82	-0.1
2,404,944	+		DZA65_RS11310	0.82	-0.2
2,404,944	+		DZA65_RS11310	0.82	-0.5
2,404,944	+		DZA65_RS11310	0.82	-0.9
2,404,944	+		DZA65_RS11310	0.82	+1.5
2,404,944	+		DZA65_RS11310	0.82	+0.2
2,404,945	-		DZA65_RS11310	0.82	-0.1
2,404,945	-		DZA65_RS11310	0.82	+1.3
2,404,945	-		DZA65_RS11310	0.82	+0.8
2,404,945	-		DZA65_RS11310	0.82	-0.8
2,404,945	-		DZA65_RS11310	0.82	+0.3
2,404,945	-		DZA65_RS11310	0.82	-0.3
2,404,945	-		DZA65_RS11310	0.82	+0.2
2,404,945	-		DZA65_RS11310	0.82	+0.7
2,404,945	-		DZA65_RS11310	0.82	-0.0
2,404,945	-		DZA65_RS11310	0.82	-0.8
2,404,945	-		DZA65_RS11310	0.82	-0.8
2,405,078	+				+2.5
2,405,078	+				-0.1
2,405,078	+				+0.6
2,405,079	-				+0.8
2,405,155	+				+0.6
2,405,182	+				-0.4
2,405,291	+		DZA65_RS11315	0.18	+0.5
2,405,291	+		DZA65_RS11315	0.18	-0.6
2,405,291	+		DZA65_RS11315	0.18	-0.3
2,405,291	+		DZA65_RS11315	0.18	-0.4
2,405,350	+		DZA65_RS11315	0.23	+0.2
2,405,351	-		DZA65_RS11315	0.23	-0.2
2,405,351	-		DZA65_RS11315	0.23	+1.7
2,405,351	-		DZA65_RS11315	0.23	+0.5
2,405,462	+		DZA65_RS11315	0.34	+0.7
2,405,462	+		DZA65_RS11315	0.34	-1.2
2,405,462	+		DZA65_RS11315	0.34	+0.6
2,405,462	+		DZA65_RS11315	0.34	+1.0
2,405,462	+		DZA65_RS11315	0.34	-1.4
2,405,462	+		DZA65_RS11315	0.34	+0.2
2,405,462	+		DZA65_RS11315	0.34	+0.2
2,405,463	-		DZA65_RS11315	0.34	+1.0
2,405,463	-		DZA65_RS11315	0.34	+0.4
2,405,463	-		DZA65_RS11315	0.34	+1.0
2,405,465	+		DZA65_RS11315	0.34	-1.2
2,405,466	-		DZA65_RS11315	0.34	+0.2
2,405,466	-		DZA65_RS11315	0.34	+1.2
2,405,480	+		DZA65_RS11315	0.35	+0.2
2,405,515	+		DZA65_RS11315	0.39	-0.4
2,405,515	+		DZA65_RS11315	0.39	+0.6
2,405,516	-		DZA65_RS11315	0.39	-1.4
2,405,614	+		DZA65_RS11315	0.48	+0.2
2,405,614	+		DZA65_RS11315	0.48	-0.8
2,405,615	-		DZA65_RS11315	0.48	-0.4
2,405,615	-		DZA65_RS11315	0.48	+0.8
2,405,615	-		DZA65_RS11315	0.48	-0.4
2,405,615	-		DZA65_RS11315	0.48	+0.2
2,405,636	+		DZA65_RS11315	0.50	+0.7
2,405,636	+		DZA65_RS11315	0.50	-1.2
2,405,636	+		DZA65_RS11315	0.50	+0.1
2,405,636	+		DZA65_RS11315	0.50	-0.2
2,405,636	+		DZA65_RS11315	0.50	-0.2
2,405,636	+		DZA65_RS11315	0.50	+0.8
2,405,637	-		DZA65_RS11315	0.50	-0.2
2,405,637	-		DZA65_RS11315	0.50	+1.3
2,405,637	-		DZA65_RS11315	0.50	-0.5
2,405,637	-		DZA65_RS11315	0.50	-0.3
2,405,865	+		DZA65_RS11315	0.71	-1.2
2,405,929	+		DZA65_RS11315	0.77	+0.7
2,405,929	+		DZA65_RS11315	0.77	+1.9
2,405,929	+		DZA65_RS11315	0.77	+0.8
2,405,930	-		DZA65_RS11315	0.77	-0.6
2,405,930	-		DZA65_RS11315	0.77	+0.4
2,405,930	-		DZA65_RS11315	0.77	+0.3
2,405,951	+		DZA65_RS11315	0.79	-1.2
2,405,951	+		DZA65_RS11315	0.79	+0.2
2,405,951	+		DZA65_RS11315	0.79	-1.4
2,405,952	-		DZA65_RS11315	0.79	-0.1
2,406,023	+		DZA65_RS11315	0.86	+2.5
2,406,036	-		DZA65_RS11315	0.87	-1.6
2,406,142	+				+1.2
2,406,143	-				-1.2
2,406,174	-				-1.0
2,406,174	-				-0.2
2,406,180	+				-0.2
2,406,180	+				-0.1
2,406,180	+				-0.2
2,406,180	+				+0.5
2,406,180	+				-1.0
2,406,180	+				-0.0
2,406,180	+				+0.2
2,406,180	+				-0.1
2,406,180	+				+0.0
2,406,180	+				-0.2
2,406,180	+				+0.4
2,406,181	-				-1.1
2,406,181	-				-0.2
2,406,181	-				+0.2
2,406,181	-				-0.8
2,406,181	-				-1.8
2,406,236	-				+0.1
2,406,261	+				+1.2
2,406,374	-				-0.8
2,406,425	+				-0.6
2,406,486	-				-0.4
2,406,493	+				+0.2
2,406,494	-				-0.6
2,406,494	-				-0.4
2,406,551	+				+0.2
2,406,551	+				+1.0
2,406,552	-				-0.6
2,406,552	-				-1.4
2,406,600	+				-0.1
2,406,621	+				-0.3
2,406,621	+				+1.1
2,406,621	+				-0.0
2,406,621	+				+0.4
2,406,622	-				+1.1
2,406,622	-				+0.2
2,406,622	-				+2.6
2,406,622	-				+0.2
2,406,731	+		DZA65_RS11320	0.17	-0.1
2,406,732	-		DZA65_RS11320	0.17	-0.5
2,406,732	-		DZA65_RS11320	0.17	+0.2
2,406,732	-		DZA65_RS11320	0.17	-1.1
2,406,784	+		DZA65_RS11320	0.22	-0.4
2,406,784	+		DZA65_RS11320	0.22	-1.4
2,406,785	-		DZA65_RS11320	0.22	+1.8
2,406,807	+		DZA65_RS11320	0.24	-0.3
2,406,808	-		DZA65_RS11320	0.24	-0.1
2,406,808	-		DZA65_RS11320	0.24	+0.8
2,406,808	-		DZA65_RS11320	0.24	+0.7
2,406,851	+		DZA65_RS11320	0.28	-0.3
2,406,851	+		DZA65_RS11320	0.28	-0.8
2,406,851	+		DZA65_RS11320	0.28	-1.4
2,406,852	-		DZA65_RS11320	0.28	+0.0
2,406,852	-		DZA65_RS11320	0.28	+0.4
2,406,907	-		DZA65_RS11320	0.33	-0.2
2,406,907	-		DZA65_RS11320	0.33	-0.8
2,406,907	-		DZA65_RS11320	0.33	+0.2
2,406,907	-		DZA65_RS11320	0.33	-0.7
2,406,943	+		DZA65_RS11320	0.36	-0.8
2,406,944	-		DZA65_RS11320	0.36	+0.5
2,406,948	+		DZA65_RS11320	0.36	+0.8
2,406,948	+		DZA65_RS11320	0.36	-0.6
2,406,948	+		DZA65_RS11320	0.36	-0.0
2,406,948	+		DZA65_RS11320	0.36	-0.1
2,406,948	+		DZA65_RS11320	0.36	+0.2
2,406,949	-				+0.6
2,406,949	-		DZA65_RS11320	0.36	+0.7
2,406,949	-		DZA65_RS11320	0.36	+0.5
2,406,949	-		DZA65_RS11320	0.36	+0.4
2,406,949	-		DZA65_RS11320	0.36	+0.9
2,406,994	+		DZA65_RS11320	0.40	+0.2
2,407,177	+		DZA65_RS11320	0.57	-1.4