Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11125

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,356,688	+		DZA65_RS11120	0.37	-0.1
2,356,779	+		DZA65_RS11120	0.44	-1.4
2,356,779	+		DZA65_RS11120	0.44	-0.8
2,356,780	-		DZA65_RS11120	0.45	+0.3
2,357,012	+		DZA65_RS11120	0.64	+2.5
2,357,012	+		DZA65_RS11120	0.64	-1.0
2,357,013	-		DZA65_RS11120	0.64	-0.8
2,357,013	-		DZA65_RS11120	0.64	-1.4
2,357,013	-		DZA65_RS11120	0.64	-0.3
2,357,060	+		DZA65_RS11120	0.68	-0.5
2,357,060	+		DZA65_RS11120	0.68	-1.1
2,357,060	+		DZA65_RS11120	0.68	+0.2
2,357,061	-		DZA65_RS11120	0.68	+0.6
2,357,061	-		DZA65_RS11120	0.68	+1.2
2,357,134	-		DZA65_RS11120	0.74	-0.8
2,357,143	+		DZA65_RS11120	0.75	+0.0
2,357,143	+		DZA65_RS11120	0.75	-0.4
2,357,143	+		DZA65_RS11120	0.75	-0.7
2,357,144	-		DZA65_RS11120	0.75	-0.7
2,357,369	+				-0.5
2,357,369	+				-1.8
2,357,405	+				-0.1
2,357,405	+				-0.0
2,357,466	-				-0.6
2,357,518	+				-0.8
2,357,518	+				-0.2
2,357,518	+				+0.9
2,357,519	-				-0.2
2,357,534	-				-0.8
2,357,541	+				-0.2
2,357,541	+				-0.4
2,357,541	+				-0.1
2,357,541	+				+0.4
2,357,541	+				+0.5
2,357,541	+				-0.3
2,357,541	+				-0.3
2,357,541	+				-0.3
2,357,542	-				+0.7
2,357,542	-				-0.0
2,357,542	-				-1.0
2,357,542	-				-0.8
2,357,542	-				-0.0
2,357,542	-				-1.4
2,357,542	-				-1.4
2,357,542	-				-1.2
2,357,542	-				+0.1
2,357,543	+				+0.2
2,357,543	+				+1.0
2,357,544	-				-0.8
2,357,544	-				-0.9
2,357,544	-				-0.2
2,357,544	-				-0.3
2,357,544	-				-0.1
2,357,544	-				+0.2
2,357,788	-		DZA65_RS11125	0.12	-1.5
2,357,790	+				+0.5
2,357,790	+		DZA65_RS11125	0.13	+0.7
2,357,791	-		DZA65_RS11125	0.13	+0.2
2,357,791	-		DZA65_RS11125	0.13	-1.7
2,357,791	-		DZA65_RS11125	0.13	-0.7
2,357,890	-		DZA65_RS11125	0.20	-1.4
2,357,923	-		DZA65_RS11125	0.22	-0.8
2,357,928	+		DZA65_RS11125	0.22	+2.2
2,357,928	+		DZA65_RS11125	0.22	-0.5
2,357,928	+		DZA65_RS11125	0.22	-0.8
2,357,929	-		DZA65_RS11125	0.23	+0.0
2,357,929	-		DZA65_RS11125	0.23	+1.2
2,357,929	-		DZA65_RS11125	0.23	-1.1
2,358,033	+		DZA65_RS11125	0.30	-2.6
2,358,164	+		DZA65_RS11125	0.39	+1.8
2,358,267	+		DZA65_RS11125	0.47	+0.6
2,358,325	-		DZA65_RS11125	0.51	-2.1
2,358,338	-		DZA65_RS11125	0.52	+0.5
2,358,653	+		DZA65_RS11125	0.74	-1.4
2,358,708	-		DZA65_RS11125	0.78	-0.8
2,358,708	-		DZA65_RS11125	0.78	-0.8
2,358,865	+		DZA65_RS11125	0.89	-0.4
2,358,944	-				+0.9
2,359,016	+				-0.4
2,359,016	+				+1.3
2,359,016	+				+0.2
2,359,016	+				+0.6
2,359,016	+				-1.8
2,359,016	+				+0.8
2,359,016	+				-0.2
2,359,016	+				-0.5
2,359,016	+				+1.3
2,359,016	+				-1.0
2,359,016	+				+0.0
2,359,016	+				-1.4
2,359,016	+				-1.8
2,359,016	+				+1.2
2,359,016	+				-0.2
2,359,017	-				+0.4
2,359,017	-				+0.5
2,359,017	-				+0.0
2,359,017	-				-0.7
2,359,017	-				-1.4
2,359,017	-				-0.7
2,359,017	-				-0.4
2,359,017	-				-0.8
2,359,017	-				-0.1
2,359,017	-				-0.6
2,359,017	-				-0.9
2,359,017	-				+0.6
2,359,017	-				+0.3
2,359,017	-				-0.1
2,359,017	-				-0.8
2,359,017	-				+0.2
2,359,017	-				+0.3
2,359,017	-				-0.2
2,359,017	-				-1.1
2,359,017	-				-0.8
2,359,017	-				+0.4
2,359,017	-				-1.0
2,359,017	-				-0.1
2,359,017	-				+0.2
2,359,018	+				-0.4
2,359,018	+				+0.6
2,359,018	+				+0.2
2,359,018	+				+1.2
2,359,018	+				-0.1
2,359,019	-				-0.1
2,359,019	-				+0.3
2,359,019	-				+0.3
2,359,019	-				+0.2
2,359,034	+				+1.8
2,359,035	-				-0.6
2,359,113	-		DZA65_RS11130	0.11	+0.9
2,359,156	+		DZA65_RS11130	0.15	+0.0
2,359,157	-		DZA65_RS11130	0.15	+1.0
2,359,157	-		DZA65_RS11130	0.15	+0.3
2,359,184	+		DZA65_RS11130	0.18	-2.1
2,359,285	+		DZA65_RS11130	0.29	-0.1
2,359,286	-		DZA65_RS11130	0.29	-0.3
2,359,286	-		DZA65_RS11130	0.29	+1.5
2,359,294	+		DZA65_RS11130	0.30	-1.4
2,359,330	-		DZA65_RS11130	0.34	+0.5
2,359,334	+		DZA65_RS11130	0.34	-0.3
2,359,335	-		DZA65_RS11130	0.35	+0.1
2,359,335	-		DZA65_RS11130	0.35	+0.1
2,359,420	-		DZA65_RS11130	0.44	-0.4
2,359,501	+		DZA65_RS11130	0.52	-0.1
2,359,501	+		DZA65_RS11130	0.52	-0.6
2,359,501	+		DZA65_RS11130	0.52	+0.4
2,359,509	+		DZA65_RS11130	0.53	+0.2
2,359,510	-		DZA65_RS11130	0.53	-0.2
2,359,557	+		DZA65_RS11130	0.58	-0.2
2,359,558	-		DZA65_RS11130	0.59	+0.4
2,359,604	-		DZA65_RS11130	0.64	-0.4
2,359,604	-		DZA65_RS11130	0.64	-0.1
2,359,618	+		DZA65_RS11130	0.65	-1.4
2,359,618	+		DZA65_RS11130	0.65	+0.4
2,359,618	+		DZA65_RS11130	0.65	-1.0
2,359,619	-		DZA65_RS11130	0.65	+0.6
2,359,619	-		DZA65_RS11130	0.65	-0.2
2,359,622	+		DZA65_RS11130	0.65	-1.6
2,359,622	+		DZA65_RS11130	0.65	+0.2
2,359,623	-		DZA65_RS11130	0.66	+0.1
2,359,623	-		DZA65_RS11130	0.66	-0.7
2,359,776	+		DZA65_RS11130	0.82	+0.5
2,359,776	+		DZA65_RS11130	0.82	-0.7
2,359,776	+		DZA65_RS11130	0.82	-2.4
2,359,776	+		DZA65_RS11130	0.82	+0.4
2,359,776	+		DZA65_RS11130	0.82	-0.6
2,359,777	-		DZA65_RS11130	0.82	-1.1
2,359,777	-		DZA65_RS11130	0.82	-0.8
2,359,777	-		DZA65_RS11130	0.82	-0.6
2,359,915	-				+0.5
2,359,931	+				+0.8
2,359,932	-				-0.8
2,359,932	-				+0.8
2,359,932	-				-0.5
2,359,942	+				-0.4
2,359,942	+				+0.6
2,359,942	+				-0.5
2,359,942	+				+0.4
2,359,942	+				-2.4
2,359,942	+				+0.8
2,359,942	+				+1.0
2,359,943	-				-0.1
2,359,943	-				+0.4
2,359,943	-				+0.2
2,359,971	-				+0.7
2,359,974	+				-1.3
2,359,974	+				-2.1
2,359,974	+				-0.2
2,359,974	+				-0.6
2,359,974	+				+0.8
2,359,974	+				+0.3
2,359,975	-				-0.5
2,359,975	-				+0.2
2,359,975	-				-0.0
2,359,975	-				+0.6
2,359,975	-				+0.4
2,359,975	-				+1.4
2,359,975	-				+0.9
2,359,979	+				-0.8
2,359,979	+				-1.4
2,359,980	-				+0.2
2,359,980	-				+0.2
2,359,980	-				+1.0
2,359,985	-				-1.1