Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10570

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,240,229	+		DZA65_RS10560	0.75	+0.2
2,240,292	+		DZA65_RS10560	0.89	-0.8
2,240,330	+				-1.8
2,240,330	+				+0.2
2,240,331	-				-0.4
2,240,336	-				-0.2
2,240,336	-				-0.2
2,240,366	+				+1.6
2,240,367	-				+2.5
2,240,369	+				-0.6
2,240,370	-				-0.1
2,240,370	-				-0.0
2,240,381	-				-0.7
2,240,390	+				-0.2
2,240,409	+				-0.0
2,240,468	-				+0.5
2,240,512	-				-0.2
2,240,512	-				-1.3
2,240,512	-				-0.2
2,240,523	+				-0.3
2,240,598	-		DZA65_RS10565	0.25	-0.4
2,240,599	+		DZA65_RS10565	0.26	-2.4
2,240,599	+		DZA65_RS10565	0.26	-1.5
2,240,599	+		DZA65_RS10565	0.26	-1.1
2,240,600	-		DZA65_RS10565	0.26	-1.5
2,240,600	-		DZA65_RS10565	0.26	-2.1
2,240,600	-		DZA65_RS10565	0.26	-1.0
2,240,600	-		DZA65_RS10565	0.26	-0.8
2,240,600	-		DZA65_RS10565	0.26	-0.7
2,240,689	+		DZA65_RS10565	0.48	-0.8
2,240,689	+		DZA65_RS10565	0.48	-1.0
2,240,690	-		DZA65_RS10565	0.48	-0.8
2,240,706	-		DZA65_RS10565	0.52	-0.4
2,240,706	-		DZA65_RS10565	0.52	-0.4
2,240,778	-		DZA65_RS10565	0.70	+0.6
2,240,780	-		DZA65_RS10565	0.70	+0.2
2,240,834	+		DZA65_RS10565	0.84	+0.6
2,240,834	+		DZA65_RS10565	0.84	+1.8
2,240,835	-		DZA65_RS10565	0.84	-0.0
2,240,835	-		DZA65_RS10565	0.84	-0.4
2,240,837	+		DZA65_RS10565	0.84	+1.4
2,240,837	+		DZA65_RS10565	0.84	-0.8
2,240,837	+		DZA65_RS10565	0.84	+0.6
2,240,838	-		DZA65_RS10565	0.85	+0.2
2,240,838	-		DZA65_RS10565	0.85	-1.0
2,240,869	+				-0.4
2,240,897	+				+0.7
2,240,906	+				+2.0
2,240,906	+				-1.8
2,240,906	+				-0.6
2,241,057	+				-0.5
2,241,057	+				+1.2
2,241,171	-				-0.2
2,241,171	-				+0.6
2,241,193	+		DZA65_RS10570	0.10	-1.4
2,241,193	+				-1.4
2,241,194	-		DZA65_RS10570	0.11	-1.1
2,241,194	-		DZA65_RS10570	0.11	-2.8
2,241,194	-		DZA65_RS10570	0.11	-0.3
2,241,194	-		DZA65_RS10570	0.11	-0.6
2,241,194	-		DZA65_RS10570	0.11	-1.1
2,241,248	+		DZA65_RS10570	0.14	+1.0
2,241,248	+		DZA65_RS10570	0.14	-0.6
2,241,248	+		DZA65_RS10570	0.14	-1.6
2,241,248	+		DZA65_RS10570	0.14	-1.2
2,241,249	-		DZA65_RS10570	0.14	-0.1
2,241,249	-		DZA65_RS10570	0.14	-0.0
2,241,249	-		DZA65_RS10570	0.14	-0.1
2,241,249	-		DZA65_RS10570	0.14	-0.3
2,241,249	-		DZA65_RS10570	0.14	-0.4
2,241,249	-		DZA65_RS10570	0.14	-1.1
2,241,249	-		DZA65_RS10570	0.14	-1.0
2,241,373	+		DZA65_RS10570	0.23	-0.2
2,241,373	+		DZA65_RS10570	0.23	-0.4
2,241,373	+		DZA65_RS10570	0.23	+0.2
2,241,373	+		DZA65_RS10570	0.23	-1.4
2,241,374	-		DZA65_RS10570	0.23	-0.1
2,241,374	-		DZA65_RS10570	0.23	-1.8
2,241,374	-		DZA65_RS10570	0.23	-0.5
2,241,374	-		DZA65_RS10570	0.23	+0.9
2,241,374	-		DZA65_RS10570	0.23	-0.1
2,241,374	-		DZA65_RS10570	0.23	-0.3
2,241,377	+		DZA65_RS10570	0.23	+0.0
2,241,377	+		DZA65_RS10570	0.23	-1.5
2,241,377	+		DZA65_RS10570	0.23	-0.3
2,241,377	+		DZA65_RS10570	0.23	-1.3
2,241,378	-		DZA65_RS10570	0.23	-0.9
2,241,378	-		DZA65_RS10570	0.23	+0.5
2,241,438	+		DZA65_RS10570	0.27	-1.4
2,241,439	-		DZA65_RS10570	0.28	-0.8
2,241,439	-		DZA65_RS10570	0.28	-1.8
2,241,779	+		DZA65_RS10570	0.51	-0.5
2,241,780	-		DZA65_RS10570	0.51	-0.2
2,241,780	-		DZA65_RS10570	0.51	+0.8
2,241,780	-		DZA65_RS10570	0.51	-0.0
2,241,868	+		DZA65_RS10570	0.57	-0.5
2,241,868	+		DZA65_RS10570	0.57	+0.6
2,241,868	+		DZA65_RS10570	0.57	+2.0
2,241,868	+		DZA65_RS10570	0.57	-0.5
2,241,868	+		DZA65_RS10570	0.57	+0.2
2,241,869	-		DZA65_RS10570	0.57	-0.1
2,241,869	-		DZA65_RS10570	0.57	+0.2
2,242,145	-		DZA65_RS10570	0.76	-1.5
2,242,328	+		DZA65_RS10570	0.89	-0.5
2,242,328	+		DZA65_RS10570	0.89	-0.6
2,242,359	-				+0.4
2,242,383	+				-0.2
2,242,418	+				+0.2
2,242,419	-				-2.1
2,242,486	+				-1.4
2,242,486	+				-0.4
2,242,486	+				-0.4
2,242,486	+				-0.4
2,242,486	+				-0.4
2,242,486	+				-2.5
2,242,486	+				-0.1
2,242,486	+				-1.6
2,242,486	+				-0.1
2,242,486	+				+0.5
2,242,486	+				-0.4
2,242,487	-				-1.8
2,242,487	-				-0.3
2,242,487	-				+1.5
2,242,487	-				-0.5
2,242,487	-				+0.6
2,242,487	-				-0.3
2,242,487	-				+0.8
2,242,488	+				-0.0
2,242,488	+				-1.0
2,242,488	+				-1.8
2,242,489	-				-0.5
2,242,489	-				+0.2
2,242,489	-				-0.4
2,242,516	+				+0.2
2,242,516	+				-2.4
2,242,517	-				+0.7
2,242,517	-				+0.8
2,242,561	+				-1.2
2,242,561	+				-2.8
2,242,561	+				-0.8
2,242,561	+				-1.5
2,242,561	+				+0.9
2,242,561	+				-0.2
2,242,561	+				-0.9
2,242,561	+				-0.8
2,242,561	+				+0.8
2,242,561	+				-0.6
2,242,561	+				-0.4
2,242,561	+				-0.1
2,242,561	+				-0.4
2,242,561	+				-0.1
2,242,561	+				-0.5
2,242,561	+				-0.8
2,242,561	+				-0.6
2,242,561	+				+1.6
2,242,561	+				-0.2
2,242,561	+				-0.8
2,242,561	+				-0.1
2,242,561	+				+0.6
2,242,561	+				-1.6
2,242,562	-				-0.3
2,242,562	-				-0.4
2,242,562	-				-1.6
2,242,562	-				-1.0
2,242,562	-				-1.9
2,242,562	-				-0.2
2,242,562	-				+0.7
2,242,562	-				-0.4
2,242,562	-				-0.4
2,242,565	+				-0.0
2,242,565	+				-1.7
2,242,565	+				-0.4
2,242,565	+				+0.4
2,242,565	+				-1.8
2,242,565	+				+0.8
2,242,565	+				+0.2
2,242,565	+				-0.7
2,242,565	+				+1.0
2,242,565	+				-0.6
2,242,565	+				+0.1
2,242,565	+				+0.5
2,242,566	-				-0.3
2,242,566	-				+0.0
2,242,566	-				+1.2
2,242,566	-				+1.5
2,242,566	-				-0.8
2,242,566	-				-2.1
2,242,566	-				+0.2
2,242,590	+				-1.3
2,242,590	+				+0.2
2,242,616	+				-0.4
2,242,617	-				+0.4
2,242,617	-				-0.5
2,242,617	-				-0.8
2,242,617	-				-1.0
2,242,617	-				-0.4
2,242,672	+				-0.9
2,242,672	+				+0.3
2,242,672	+				-0.0
2,242,672	+				-0.8
2,242,673	-				-0.5
2,242,674	+				+0.4
2,242,674	+				+1.8
2,242,674	+				-0.9
2,242,675	-				+0.7
2,242,679	+				+1.0
2,242,679	+				-0.4
2,242,679	+				+0.8
2,242,679	+				+0.3
2,242,679	+				-0.7
2,242,679	+				-0.4
2,242,679	+				-1.0
2,242,679	+				-0.5
2,242,679	+				-0.3
2,242,680	-				-0.6
2,242,680	-				-0.8
2,242,680	-				+0.9
2,242,680	-				-2.4
2,242,680	-				-0.6
2,242,680	-				-0.2
2,242,680	-				-1.0
2,242,680	-				-0.8
2,242,680	-				+1.4
2,242,680	-				-0.8
2,242,683	+				+0.4
2,242,684	-				+0.9
2,242,687	+				-1.6
2,242,687	+				-0.8
2,242,687	+				+0.3
2,242,688	-				+0.4
2,242,789	+		DZA65_RS10575	0.12	+0.2
2,242,790	-		DZA65_RS10575	0.12	+0.6
2,242,790	-		DZA65_RS10575	0.12	+0.7
2,242,803	-		DZA65_RS10575	0.14	+0.9
2,242,821	-		DZA65_RS10575	0.16	-0.2
2,242,851	+		DZA65_RS10575	0.19	-1.5
2,242,851	+		DZA65_RS10575	0.19	-2.8
2,242,851	+		DZA65_RS10575	0.19	+1.6
2,242,851	+		DZA65_RS10575	0.19	+0.0
2,242,851	+		DZA65_RS10575	0.19	-1.0
2,242,851	+		DZA65_RS10575	0.19	-0.1
2,242,852	-		DZA65_RS10575	0.20	+1.2
2,242,927	+		DZA65_RS10575	0.28	+0.2
2,242,927	+		DZA65_RS10575	0.28	-0.4
2,242,927	+		DZA65_RS10575	0.28	+0.5
2,242,927	+		DZA65_RS10575	0.28	-0.3
2,242,927	+		DZA65_RS10575	0.28	+0.0
2,242,928	-		DZA65_RS10575	0.28	-0.2
2,242,928	-		DZA65_RS10575	0.28	-0.2
2,242,928	-		DZA65_RS10575	0.28	+0.2
2,243,076	+		DZA65_RS10575	0.45	-0.1
2,243,076	+		DZA65_RS10575	0.45	+3.5
2,243,089	+		DZA65_RS10575	0.47	-2.4
2,243,200	+		DZA65_RS10575	0.60	-0.4
2,243,271	+		DZA65_RS10575	0.68	+1.0
2,243,272	-		DZA65_RS10575	0.68	+0.4
2,243,272	-		DZA65_RS10575	0.68	-0.1
2,243,313	+		DZA65_RS10575	0.73	+1.1
2,243,313	+		DZA65_RS10575	0.73	-0.3
2,243,313	+		DZA65_RS10575	0.73	+0.2
2,243,314	-		DZA65_RS10575	0.73	-0.7
2,243,455	+		DZA65_RS10575	0.89	-1.1
2,243,456	-		DZA65_RS10575	0.89	+1.2