Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09685

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,040,211	-		DZA65_RS09680	0.79	-0.2
2,040,598	-				+0.4
2,040,614	+				-1.1
2,040,624	+				+0.5
2,040,624	+				-1.4
2,040,624	+				-0.1
2,040,624	+				+0.7
2,040,625	-				-0.3
2,040,625	-				-1.4
2,040,625	-				-0.2
2,040,626	+				+2.0
2,040,643	+				-0.3
2,040,643	+				-0.1
2,040,643	+				-0.3
2,040,644	-				-0.2
2,040,644	-				+0.9
2,040,647	+				+2.1
2,040,648	-				-0.3
2,040,654	+				-0.1
2,040,654	+				+1.2
2,040,655	-				+0.8
2,040,655	-				-0.8
2,040,655	-				+0.4
2,040,655	-				-1.0
2,040,655	-				+0.7
2,040,691	-				-0.1
2,040,691	-				-0.4
2,040,691	-				-0.5
2,040,709	+				-1.9
2,040,709	+				-0.9
2,040,710	-				+0.2
2,040,731	+				-0.4
2,040,732	-				-0.4
2,040,732	-				+0.1
2,040,748	+				-1.3
2,040,749	-				+1.2
2,040,749	-				+0.2
2,040,749	-				-1.6
2,040,749	-				-0.8
2,040,749	-				-1.2
2,040,749	-				-0.1
2,040,750	+				+1.1
2,040,751	-				-0.1
2,040,759	-				+1.0
2,040,782	+				-0.8
2,040,899	+				-0.9
2,040,899	+				+0.2
2,040,899	+				-0.1
2,040,899	+				+1.8
2,040,900	-				-0.1
2,040,900	-				+1.1
2,040,900	-				-0.1
2,040,900	-				+1.6
2,040,902	+				-1.8
2,041,021	+				+0.2
2,041,024	+				-0.1
2,041,024	+				-0.1
2,041,050	+				+3.0
2,041,050	+				-0.4
2,041,050	+				-0.0
2,041,050	+				+0.3
2,041,050	+				-0.6
2,041,050	+				+0.2
2,041,051	-				+0.2
2,041,051	-				-0.1
2,041,051	-				+1.5
2,041,051	-				+0.2
2,041,051	-				-2.4
2,041,060	+				-0.4
2,041,092	+				+0.2
2,041,092	+				-0.4
2,041,093	-				-0.2
2,041,093	-				+0.2
2,041,093	-				-0.9
2,041,093	-				-0.8
2,041,093	-				-0.0
2,041,093	-				+1.2
2,041,128	+				+0.2
2,041,152	-				-1.1
2,041,152	-				+0.6
2,041,155	+				-0.2
2,041,155	+				-0.2
2,041,156	-				+1.0
2,041,194	+				-0.6
2,041,194	+				+0.2
2,041,198	+				-2.6
2,041,198	+				+0.7
2,041,198	+				+1.1
2,041,199	-				+0.1
2,041,199	-				+1.2
2,041,199	-				-0.3
2,041,200	+				-2.4
2,041,200	+				-1.9
2,041,200	+				-0.4
2,041,216	-				-1.3
2,041,294	+		DZA65_RS09685	0.11	-0.2
2,041,294	+				+0.2
2,041,295	-		DZA65_RS09685	0.11	+2.2
2,041,328	+		DZA65_RS09685	0.13	+0.6
2,041,328	+		DZA65_RS09685	0.13	-1.9
2,041,329	-		DZA65_RS09685	0.13	-0.9
2,041,329	-				+0.6
2,041,329	-		DZA65_RS09685	0.13	-0.3
2,041,329	-				+2.8
2,041,425	+		DZA65_RS09685	0.19	-0.4
2,041,440	+		DZA65_RS09685	0.20	+0.2
2,041,440	+		DZA65_RS09685	0.20	-0.4
2,041,441	-		DZA65_RS09685	0.20	+1.0
2,041,576	+		DZA65_RS09685	0.28	+2.6
2,041,576	+		DZA65_RS09685	0.28	+0.2
2,041,576	+		DZA65_RS09685	0.28	-0.5
2,041,576	+		DZA65_RS09685	0.28	+0.2
2,041,576	+		DZA65_RS09685	0.28	+0.2
2,041,576	+		DZA65_RS09685	0.28	+1.2
2,041,576	+		DZA65_RS09685	0.28	-0.6
2,041,576	+		DZA65_RS09685	0.28	+1.2
2,041,576	+		DZA65_RS09685	0.28	+0.2
2,041,576	+		DZA65_RS09685	0.28	+0.6
2,041,576	+		DZA65_RS09685	0.28	+1.1
2,041,576	+		DZA65_RS09685	0.28	+0.4
2,041,576	+		DZA65_RS09685	0.28	+0.2
2,041,576	+		DZA65_RS09685	0.28	+0.2
2,041,576	+		DZA65_RS09685	0.28	+0.3
2,041,576	+		DZA65_RS09685	0.28	+2.1
2,041,577	-		DZA65_RS09685	0.28	-1.4
2,041,577	-		DZA65_RS09685	0.28	-0.1
2,041,577	-		DZA65_RS09685	0.28	+1.1
2,041,577	-		DZA65_RS09685	0.28	-0.8
2,041,577	-		DZA65_RS09685	0.28	-0.8
2,041,577	-		DZA65_RS09685	0.28	-1.4
2,041,577	-		DZA65_RS09685	0.28	-0.6
2,041,577	-		DZA65_RS09685	0.28	-1.4
2,041,577	-		DZA65_RS09685	0.28	+0.4
2,041,577	-		DZA65_RS09685	0.28	-0.4
2,041,577	-		DZA65_RS09685	0.28	-0.8
2,041,577	-		DZA65_RS09685	0.28	-0.1
2,041,577	-		DZA65_RS09685	0.28	+0.2
2,041,578	+		DZA65_RS09685	0.28	+1.7
2,041,578	+		DZA65_RS09685	0.28	-1.8
2,041,578	+		DZA65_RS09685	0.28	-1.1
2,041,578	+		DZA65_RS09685	0.28	+0.2
2,041,578	+		DZA65_RS09685	0.28	-0.4
2,041,579	-		DZA65_RS09685	0.28	+0.9
2,041,579	-		DZA65_RS09685	0.28	-0.4
2,041,579	-		DZA65_RS09685	0.28	+1.7
2,041,579	-		DZA65_RS09685	0.28	-1.2
2,041,579	-		DZA65_RS09685	0.28	-1.9
2,041,579	-		DZA65_RS09685	0.28	+0.4
2,041,618	+		DZA65_RS09685	0.31	-0.6
2,041,618	+		DZA65_RS09685	0.31	+0.6
2,041,618	+		DZA65_RS09685	0.31	+0.6
2,041,618	+		DZA65_RS09685	0.31	-2.4
2,041,618	+		DZA65_RS09685	0.31	-1.0
2,041,618	+		DZA65_RS09685	0.31	+0.1
2,041,618	+		DZA65_RS09685	0.31	+0.4
2,041,619	-		DZA65_RS09685	0.31	+0.2
2,041,619	-		DZA65_RS09685	0.31	-0.2
2,041,619	-		DZA65_RS09685	0.31	-0.8
2,041,741	+		DZA65_RS09685	0.38	+0.1
2,041,779	+		DZA65_RS09685	0.40	+0.2
2,041,779	+		DZA65_RS09685	0.40	+0.2
2,041,780	-		DZA65_RS09685	0.40	+0.0
2,041,780	-		DZA65_RS09685	0.40	-0.4
2,041,867	+		DZA65_RS09685	0.45	-1.1
2,041,867	+		DZA65_RS09685	0.45	-2.1
2,041,867	+				+0.2
2,041,868	-		DZA65_RS09685	0.46	-0.8
2,041,868	-		DZA65_RS09685	0.46	+0.4
2,041,868	-		DZA65_RS09685	0.46	-0.4
2,041,868	-		DZA65_RS09685	0.46	+1.0
2,041,868	-		DZA65_RS09685	0.46	-0.1
2,041,869	+		DZA65_RS09685	0.46	+0.1
2,041,870	-		DZA65_RS09685	0.46	+0.0
2,041,870	-		DZA65_RS09685	0.46	-2.4
2,041,870	-		DZA65_RS09685	0.46	-1.2
2,041,870	-		DZA65_RS09685	0.46	+0.2
2,041,870	-		DZA65_RS09685	0.46	-0.4
2,041,904	+		DZA65_RS09685	0.48	-1.2
2,041,904	+		DZA65_RS09685	0.48	+0.6
2,041,917	+		DZA65_RS09685	0.48	+0.8
2,041,917	+		DZA65_RS09685	0.48	+0.1
2,041,917	+		DZA65_RS09685	0.48	+1.2
2,041,917	+		DZA65_RS09685	0.48	-0.2
2,041,917	+		DZA65_RS09685	0.48	+0.2
2,041,917	+		DZA65_RS09685	0.48	+0.0
2,041,917	+		DZA65_RS09685	0.48	+0.2
2,041,918	-		DZA65_RS09685	0.49	-1.8
2,041,920	+		DZA65_RS09685	0.49	-0.4
2,041,920	+		DZA65_RS09685	0.49	+0.6
2,041,920	+		DZA65_RS09685	0.49	+1.2
2,041,920	+		DZA65_RS09685	0.49	-0.6
2,041,920	+		DZA65_RS09685	0.49	+0.8
2,041,920	+		DZA65_RS09685	0.49	+0.6
2,041,921	-		DZA65_RS09685	0.49	-0.5
2,041,921	-		DZA65_RS09685	0.49	-1.1
2,041,921	-		DZA65_RS09685	0.49	+0.7
2,042,232	+		DZA65_RS09685	0.67	-1.2
2,042,440	-		DZA65_RS09685	0.80	+0.6
2,042,440	-		DZA65_RS09685	0.80	+1.3
2,042,440	-		DZA65_RS09685	0.80	+0.0
2,042,460	-		DZA65_RS09685	0.81	+1.2
2,042,460	-		DZA65_RS09685	0.81	-0.8
2,042,460	-		DZA65_RS09685	0.81	+0.9
2,042,460	-		DZA65_RS09685	0.81	-1.4
2,042,675	+				-0.2
2,042,676	-				-0.5
2,042,796	-				+0.4
2,042,884	+				-1.4
2,042,892	+				+0.7
2,042,893	-				-0.3
2,042,929	+				+0.6
2,042,930	-				-1.1
2,042,931	+				+0.8
2,042,981	+				+0.5
2,042,981	+				+0.5
2,042,982	-				-0.5
2,042,982	-				+0.3
2,042,982	-				-1.4
2,042,983	+				+0.7
2,042,983	+				-0.1
2,043,064	+				-1.0
2,043,064	+				-0.2
2,043,073	-				+0.8
2,043,089	+				+0.7
2,043,089	+				+0.2
2,043,089	+				-0.1
2,043,097	+				-0.4
2,043,098	-				+1.7
2,043,127	-				-0.2
2,043,128	-				-0.0
2,043,141	-				+0.5
2,043,141	-				+1.5
2,043,144	+				-2.8
2,043,145	-				-0.8
2,043,155	+				+0.1
2,043,156	-				+0.2
2,043,168	+				+1.8
2,043,170	+				-0.5
2,043,171	-				-0.4
2,043,171	-				+1.5
2,043,186	-				-1.0
2,043,248	+				-0.8
2,043,294	+				-1.2
2,043,294	+				+0.2
2,043,294	+				-1.2
2,043,294	+				+1.0
2,043,294	+				+0.5
2,043,298	+				-1.4
2,043,298	+				+0.2
2,043,299	-				+0.2
2,043,299	-				-0.3
2,043,299	-				-0.4
2,043,299	-				-0.1
2,043,299	-				-0.3
2,043,300	+				-0.8
2,043,300	+				+0.3
2,043,300	+				+0.6
2,043,300	+				+0.1
2,043,300	+				-0.8
2,043,300	+				+1.4
2,043,300	+				+0.2
2,043,301	-				+0.2
2,043,301	-				-0.3
2,043,301	-				-0.2
2,043,301	-				-1.4
2,043,301	-				+0.8
2,043,301	-				+1.7
2,043,304	+				+0.4
2,043,304	+				-1.0
2,043,304	+				-1.2
2,043,304	+				-0.1
2,043,305	-				+1.4
2,043,328	+		DZA65_RS09690	0.11	+0.2
2,043,422	+		DZA65_RS09690	0.16	-0.7
2,043,432	+		DZA65_RS09690	0.17	-0.8
2,043,433	-		DZA65_RS09690	0.17	-0.2
2,043,504	+		DZA65_RS09690	0.21	+1.8
2,043,504	+		DZA65_RS09690	0.21	+0.0
2,043,504	+		DZA65_RS09690	0.21	+1.8
2,043,505	-		DZA65_RS09690	0.21	+0.4
2,043,510	+		DZA65_RS09690	0.22	-1.2
2,043,510	+		DZA65_RS09690	0.22	+0.2
2,043,510	+		DZA65_RS09690	0.22	+0.5
2,043,511	-		DZA65_RS09690	0.22	-0.4
2,043,511	-		DZA65_RS09690	0.22	-1.6
2,043,513	+		DZA65_RS09690	0.22	+0.1
2,043,541	-		DZA65_RS09690	0.23	+0.6
2,043,550	-		DZA65_RS09690	0.24	+0.9
2,043,554	-		DZA65_RS09690	0.24	-0.3
2,043,554	-		DZA65_RS09690	0.24	+0.2
2,043,570	+		DZA65_RS09690	0.25	-0.6
2,043,571	-		DZA65_RS09690	0.25	-1.1
2,043,652	+		DZA65_RS09690	0.30	-0.9
2,043,653	-		DZA65_RS09690	0.30	-0.4
2,043,679	+		DZA65_RS09690	0.32	+0.7
2,043,679	+		DZA65_RS09690	0.32	-0.8
2,043,679	+		DZA65_RS09690	0.32	+0.2
2,043,680	-		DZA65_RS09690	0.32	+0.9
2,043,681	+		DZA65_RS09690	0.32	-0.7
2,043,682	-				-0.2
2,043,694	-		DZA65_RS09690	0.33	+0.5
2,043,705	+		DZA65_RS09690	0.33	-0.6
2,043,706	-		DZA65_RS09690	0.33	-2.1
2,043,706	-		DZA65_RS09690	0.33	-1.0
2,043,722	+		DZA65_RS09690	0.34	+1.8
2,043,723	-		DZA65_RS09690	0.34	-0.3
2,043,726	-		DZA65_RS09690	0.34	+0.4