Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08830

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,863,622	-				+1.3
1,863,662	+				+0.1
1,863,706	+				-0.4
1,863,706	+				+0.7
1,863,706	+				-0.7
1,863,706	+				+0.6
1,863,707	-				+0.7
1,863,707	-				+0.6
1,863,765	+				-0.4
1,863,765	+				+0.1
1,863,765	+				-0.8
1,863,901	+				-1.1
1,863,902	-				-1.0
1,863,966	+				-1.2
1,863,967	-				+0.8
1,863,967	-				+0.9
1,863,967	-				-0.7
1,863,967	-				-0.4
1,863,967	-				+0.7
1,863,967	-				-3.0
1,863,967	-				+0.3
1,863,967	-				-1.5
1,863,967	-				+0.9
1,864,041	+		DZA65_RS08825	0.17	+0.9
1,864,041	+		DZA65_RS08825	0.17	+1.0
1,864,041	+		DZA65_RS08825	0.17	+0.3
1,864,041	+		DZA65_RS08825	0.17	+1.3
1,864,041	+		DZA65_RS08825	0.17	-0.1
1,864,041	+		DZA65_RS08825	0.17	-0.7
1,864,041	+		DZA65_RS08825	0.17	+1.5
1,864,195	-		DZA65_RS08825	0.47	+0.2
1,864,195	-		DZA65_RS08825	0.47	-0.1
1,864,195	-		DZA65_RS08825	0.47	-0.1
1,864,195	-		DZA65_RS08825	0.47	-1.8
1,864,195	-		DZA65_RS08825	0.47	+0.3
1,864,195	-		DZA65_RS08825	0.47	-1.0
1,864,197	-		DZA65_RS08825	0.47	-1.0
1,864,467	+				+0.9
1,864,468	-				-1.5
1,864,774	+		DZA65_RS08830	0.10	-0.4
1,864,775	-		DZA65_RS08830	0.10	-0.4
1,865,018	-		DZA65_RS08830	0.23	-0.7
1,865,018	-		DZA65_RS08830	0.23	-1.3
1,865,018	-		DZA65_RS08830	0.23	-0.1
1,865,053	-		DZA65_RS08830	0.25	+1.0
1,865,053	-		DZA65_RS08830	0.25	+0.4
1,865,086	+		DZA65_RS08830	0.27	+0.6
1,865,206	+		DZA65_RS08830	0.34	+0.9
1,865,206	+		DZA65_RS08830	0.34	-0.3
1,865,206	+				+0.7
1,865,206	+		DZA65_RS08830	0.34	+0.1
1,865,206	+		DZA65_RS08830	0.34	-2.5
1,865,206	+		DZA65_RS08830	0.34	-0.1
1,865,206	+		DZA65_RS08830	0.34	+0.2
1,865,207	-		DZA65_RS08830	0.34	-1.3
1,865,207	-		DZA65_RS08830	0.34	+0.4
1,865,207	-		DZA65_RS08830	0.34	-1.2
1,865,207	-		DZA65_RS08830	0.34	-2.0
1,865,207	-		DZA65_RS08830	0.34	-0.7
1,865,266	+		DZA65_RS08830	0.37	+0.8
1,865,274	+		DZA65_RS08830	0.37	+0.1
1,865,342	-		DZA65_RS08830	0.41	-0.7
1,865,342	-		DZA65_RS08830	0.41	-1.7
1,865,663	-		DZA65_RS08830	0.58	-0.4
1,865,725	+		DZA65_RS08830	0.62	-0.4
1,865,725	+		DZA65_RS08830	0.62	-2.5
1,865,725	+		DZA65_RS08830	0.62	+0.0
1,865,737	+		DZA65_RS08830	0.62	+0.3
1,865,738	-		DZA65_RS08830	0.62	-0.2
1,865,745	+		DZA65_RS08830	0.63	+0.5
1,865,840	-		DZA65_RS08830	0.68	-0.3
1,866,067	-		DZA65_RS08830	0.80	-0.3
1,866,218	+		DZA65_RS08830	0.88	-0.3
1,866,219	-		DZA65_RS08830	0.88	-0.6
1,866,225	+		DZA65_RS08830	0.88	-1.6
1,866,235	-		DZA65_RS08830	0.89	-1.3
1,866,235	-		DZA65_RS08830	0.89	-0.6
1,866,279	+				+0.5
1,866,279	+				+0.9
1,866,279	+				+1.1
1,866,280	-				-0.2
1,866,284	+				+1.6
1,866,284	+				-0.9
1,866,284	+				-0.7
1,866,285	-				-1.1
1,866,285	-				+0.2
1,866,285	-				-1.5
1,866,285	-				+0.2
1,866,285	-				+0.3
1,866,311	+				+0.1
1,866,311	+				-0.2
1,866,311	+				+2.6
1,866,312	-				+1.0
1,866,312	-				-1.0
1,866,312	-				+0.5
1,866,327	+				-0.7
1,866,327	+				+0.8
1,866,327	+				+0.6
1,866,328	-				+0.6
1,866,330	+				+0.3
1,866,330	+				+0.9
1,866,330	+				+0.6
1,866,330	+				-0.8
1,866,330	+				+0.3
1,866,331	-				-0.4
1,866,331	-				-1.5
1,866,331	-				+0.9
1,866,352	+				-1.7
1,866,353	-				+0.1
1,866,381	+				-1.6
1,866,381	+				+0.2
1,866,382	-				+1.5
1,866,407	+				-0.5
1,866,407	+				-1.4
1,866,407	+				-1.3
1,866,407	+				-0.2
1,866,408	-				+0.3
1,866,408	-				+0.3
1,866,408	-				+0.3
1,866,408	-				-0.1
1,866,417	-				-0.1
1,866,463	+				+0.5
1,866,463	+				-1.2
1,866,463	+				+1.3
1,866,464	-				-0.7
1,866,464	-				-0.2
1,866,464	-				-0.7
1,866,464	-				-0.7
1,866,470	-				-0.6
1,866,487	-				+0.2
1,866,533	-		DZA65_RS08835	0.13	-0.4
1,866,533	-		DZA65_RS08835	0.13	-1.5
1,866,552	+		DZA65_RS08835	0.17	-0.7
1,866,552	+		DZA65_RS08835	0.17	-1.0
1,866,553	-		DZA65_RS08835	0.17	+0.3
1,866,553	-		DZA65_RS08835	0.17	+0.8
1,866,553	-		DZA65_RS08835	0.17	-1.2
1,866,553	-		DZA65_RS08835	0.17	-1.4
1,866,553	-		DZA65_RS08835	0.17	+0.0
1,866,553	-		DZA65_RS08835	0.17	-1.3
1,866,553	-		DZA65_RS08835	0.17	-1.7
1,866,556	+		DZA65_RS08835	0.18	-0.1
1,866,556	+				-0.1
1,866,556	+		DZA65_RS08835	0.18	-1.5
1,866,556	+		DZA65_RS08835	0.18	-1.7
1,866,556	+		DZA65_RS08835	0.18	-1.9
1,866,557	-		DZA65_RS08835	0.18	+0.9
1,866,557	-		DZA65_RS08835	0.18	-1.1
1,866,557	-		DZA65_RS08835	0.18	-1.2
1,866,644	-		DZA65_RS08835	0.34	-0.3
1,866,644	-		DZA65_RS08835	0.34	-0.6
1,866,686	-		DZA65_RS08835	0.42	+0.3
1,866,686	-		DZA65_RS08835	0.42	+0.2
1,866,703	+		DZA65_RS08835	0.46	+0.2
1,866,704	-		DZA65_RS08835	0.46	+0.0
1,866,733	+		DZA65_RS08835	0.51	+0.1
1,866,734	-		DZA65_RS08835	0.51	+3.8
1,866,740	+		DZA65_RS08835	0.53	+0.9
1,866,740	+		DZA65_RS08835	0.53	-0.5
1,866,740	+		DZA65_RS08835	0.53	-0.1
1,866,740	+		DZA65_RS08835	0.53	+1.2
1,866,740	+		DZA65_RS08835	0.53	+1.1
1,866,740	+		DZA65_RS08835	0.53	-2.0
1,866,740	+		DZA65_RS08835	0.53	-0.3
1,866,740	+		DZA65_RS08835	0.53	+0.1
1,866,741	-		DZA65_RS08835	0.53	+0.5
1,866,741	-		DZA65_RS08835	0.53	-0.5
1,866,741	-		DZA65_RS08835	0.53	+0.3
1,866,741	-		DZA65_RS08835	0.53	+1.3
1,866,741	-		DZA65_RS08835	0.53	-0.5
1,866,741	-		DZA65_RS08835	0.53	-0.9
1,866,741	-		DZA65_RS08835	0.53	+0.8
1,866,741	-		DZA65_RS08835	0.53	-0.3
1,866,741	-		DZA65_RS08835	0.53	-0.4
1,866,741	-		DZA65_RS08835	0.53	+0.9
1,866,741	-		DZA65_RS08835	0.53	-2.0
1,866,741	-		DZA65_RS08835	0.53	-0.5
1,866,741	-		DZA65_RS08835	0.53	+0.3
1,866,741	-		DZA65_RS08835	0.53	-0.7
1,866,741	-		DZA65_RS08835	0.53	-0.0
1,866,752	-		DZA65_RS08835	0.55	+0.9
1,866,762	+		DZA65_RS08835	0.57	+0.5
1,866,763	-		DZA65_RS08835	0.57	+0.5
1,866,854	+		DZA65_RS08835	0.74	-2.9
1,866,854	+		DZA65_RS08835	0.74	+1.1
1,866,854	+		DZA65_RS08835	0.74	-0.0
1,866,854	+		DZA65_RS08835	0.74	-1.3
1,866,859	+		DZA65_RS08835	0.75	-0.1
1,866,859	+		DZA65_RS08835	0.75	+0.3
1,866,881	+		DZA65_RS08835	0.79	+0.5
1,866,882	-		DZA65_RS08835	0.80	+1.3
1,866,882	-		DZA65_RS08835	0.80	-0.9
1,866,921	+		DZA65_RS08835	0.87	-0.1
1,866,921	+		DZA65_RS08835	0.87	-0.5
1,866,921	+		DZA65_RS08835	0.87	-1.4
1,866,922	-		DZA65_RS08835	0.87	-0.9
1,866,922	-		DZA65_RS08835	0.87	-1.4
1,866,930	+		DZA65_RS08835	0.89	+0.5
1,866,930	+		DZA65_RS08835	0.89	-1.7
1,866,956	+				+0.7
1,866,956	+				-1.1
1,866,956	+				-0.7
1,866,956	+				-1.0
1,866,956	+				+0.1
1,866,956	+				+0.4
1,866,957	-				-1.7
1,866,957	-				+0.5
1,866,957	-				-1.0
1,866,957	-				-0.3
1,866,957	-				-0.4
1,866,976	-				+1.0
1,866,976	-				+0.3
1,867,006	-				+0.2
1,867,089	+		DZA65_RS08840	0.12	+1.6
1,867,135	-		DZA65_RS08840	0.17	+0.4
1,867,185	+		DZA65_RS08840	0.22	+3.3
1,867,185	+		DZA65_RS08840	0.22	+1.4
1,867,230	+		DZA65_RS08840	0.28	+0.0
1,867,231	-		DZA65_RS08840	0.28	-0.6
1,867,231	-		DZA65_RS08840	0.28	-0.3
1,867,326	-		DZA65_RS08840	0.39	+2.0
1,867,354	+		DZA65_RS08840	0.42	-0.8
1,867,374	+		DZA65_RS08840	0.44	+0.8
1,867,386	+		DZA65_RS08840	0.45	-1.2
1,867,407	-		DZA65_RS08840	0.48	-0.5
1,867,430	-		DZA65_RS08840	0.50	+1.9