Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22505

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,865,549	-		DZA65_RS22500	0.25	+0.5
4,865,615	+		DZA65_RS22500	0.31	+0.7
4,865,615	+		DZA65_RS22500	0.31	-0.1
4,865,615	+		DZA65_RS22500	0.31	+0.2
4,865,615	+		DZA65_RS22500	0.31	+0.2
4,865,616	-		DZA65_RS22500	0.31	-1.2
4,865,616	-		DZA65_RS22500	0.31	-0.4
4,865,616	-		DZA65_RS22500	0.31	-0.1
4,865,616	-		DZA65_RS22500	0.31	-0.8
4,865,621	+		DZA65_RS22500	0.31	+0.7
4,865,622	-		DZA65_RS22500	0.31	-0.5
4,865,666	+		DZA65_RS22500	0.35	+0.2
4,865,666	+		DZA65_RS22500	0.35	+1.1
4,865,667	-		DZA65_RS22500	0.35	-0.7
4,865,677	-		DZA65_RS22500	0.36	-0.5
4,865,690	+		DZA65_RS22500	0.37	-0.1
4,865,690	+		DZA65_RS22500	0.37	-1.2
4,865,690	+		DZA65_RS22500	0.37	-0.0
4,865,690	+		DZA65_RS22500	0.37	+0.1
4,865,690	+		DZA65_RS22500	0.37	-0.3
4,865,690	+		DZA65_RS22500	0.37	-2.1
4,865,690	+		DZA65_RS22500	0.37	-0.4
4,865,690	+		DZA65_RS22500	0.37	-2.9
4,865,690	+		DZA65_RS22500	0.37	+1.0
4,865,690	+		DZA65_RS22500	0.37	+0.2
4,865,691	-		DZA65_RS22500	0.37	-0.7
4,865,691	-		DZA65_RS22500	0.37	-0.3
4,865,691	-		DZA65_RS22500	0.37	+1.0
4,865,691	-		DZA65_RS22500	0.37	-1.2
4,865,691	-		DZA65_RS22500	0.37	+1.8
4,865,691	-		DZA65_RS22500	0.37	-1.2
4,865,692	+		DZA65_RS22500	0.37	+0.5
4,865,692	+		DZA65_RS22500	0.37	+0.2
4,865,693	-		DZA65_RS22500	0.38	+0.5
4,865,693	-		DZA65_RS22500	0.38	+0.4
4,865,693	-		DZA65_RS22500	0.38	+0.1
4,865,693	-		DZA65_RS22500	0.38	+0.9
4,865,794	+		DZA65_RS22500	0.46	+0.5
4,865,806	+		DZA65_RS22500	0.47	+0.3
4,865,806	+		DZA65_RS22500	0.47	+0.5
4,865,806	+		DZA65_RS22500	0.47	+0.6
4,865,807	-		DZA65_RS22500	0.47	+2.4
4,865,807	-		DZA65_RS22500	0.47	-0.4
4,865,884	+		DZA65_RS22500	0.54	-0.1
4,865,885	-		DZA65_RS22500	0.54	+0.1
4,865,885	-		DZA65_RS22500	0.54	+1.1
4,865,885	-		DZA65_RS22500	0.54	-0.2
4,866,022	+		DZA65_RS22500	0.66	-0.7
4,866,022	+		DZA65_RS22500	0.66	+1.1
4,866,022	+		DZA65_RS22500	0.66	-0.8
4,866,022	+		DZA65_RS22500	0.66	-0.2
4,866,023	-		DZA65_RS22500	0.66	-0.9
4,866,023	-		DZA65_RS22500	0.66	-0.2
4,866,023	-		DZA65_RS22500	0.66	+1.8
4,866,025	+		DZA65_RS22500	0.66	-0.1
4,866,025	+		DZA65_RS22500	0.66	-0.5
4,866,025	+		DZA65_RS22500	0.66	+0.9
4,866,025	+		DZA65_RS22500	0.66	+1.6
4,866,026	-		DZA65_RS22500	0.66	+0.4
4,866,026	-		DZA65_RS22500	0.66	+0.2
4,866,071	+		DZA65_RS22500	0.70	-0.4
4,866,071	+		DZA65_RS22500	0.70	-2.9
4,866,071	+		DZA65_RS22500	0.70	-0.5
4,866,071	+		DZA65_RS22500	0.70	-0.3
4,866,071	+		DZA65_RS22500	0.70	+0.4
4,866,071	+		DZA65_RS22500	0.70	+1.1
4,866,071	+		DZA65_RS22500	0.70	-1.4
4,866,071	+		DZA65_RS22500	0.70	+0.7
4,866,071	+		DZA65_RS22500	0.70	-0.7
4,866,072	-		DZA65_RS22500	0.70	-1.3
4,866,072	-		DZA65_RS22500	0.70	+0.4
4,866,072	-		DZA65_RS22500	0.70	+0.9
4,866,072	-		DZA65_RS22500	0.70	-0.6
4,866,072	-		DZA65_RS22500	0.70	-0.2
4,866,072	-		DZA65_RS22500	0.70	-0.9
4,866,072	-		DZA65_RS22500	0.70	-0.1
4,866,072	-		DZA65_RS22500	0.70	+1.1
4,866,073	+		DZA65_RS22500	0.70	-0.9
4,866,073	+		DZA65_RS22500	0.70	-0.5
4,866,073	+		DZA65_RS22500	0.70	+0.6
4,866,073	+		DZA65_RS22500	0.70	+1.4
4,866,073	+		DZA65_RS22500	0.70	-2.6
4,866,073	+		DZA65_RS22500	0.70	-0.5
4,866,074	-		DZA65_RS22500	0.70	+0.1
4,866,074	-				+0.1
4,866,074	-		DZA65_RS22500	0.70	-2.6
4,866,074	-		DZA65_RS22500	0.70	-0.1
4,866,074	-		DZA65_RS22500	0.70	+0.5
4,866,074	-		DZA65_RS22500	0.70	+0.8
4,866,074	-		DZA65_RS22500	0.70	+0.1
4,866,074	-		DZA65_RS22500	0.70	+1.8
4,866,074	-		DZA65_RS22500	0.70	+1.3
4,866,074	-		DZA65_RS22500	0.70	+0.8
4,866,074	-		DZA65_RS22500	0.70	+1.2
4,866,074	-		DZA65_RS22500	0.70	-0.6
4,866,103	+		DZA65_RS22500	0.73	+1.9
4,866,103	+		DZA65_RS22500	0.73	-0.1
4,866,103	+		DZA65_RS22500	0.73	+0.2
4,866,104	-		DZA65_RS22500	0.73	-0.7
4,866,104	-		DZA65_RS22500	0.73	-0.5
4,866,104	-		DZA65_RS22500	0.73	-0.5
4,866,170	-		DZA65_RS22500	0.79	+1.7
4,866,187	+		DZA65_RS22500	0.80	+2.3
4,866,187	+		DZA65_RS22500	0.80	+0.9
4,866,187	+		DZA65_RS22500	0.80	-0.5
4,866,188	-		DZA65_RS22500	0.80	-0.3
4,866,222	+		DZA65_RS22500	0.83	-0.8
4,866,223	-		DZA65_RS22500	0.83	-1.6
4,866,347	-				+2.1
4,866,379	+				-0.5
4,866,379	+				-0.6
4,866,380	-				+0.4
4,866,418	-				-0.2
4,866,432	-				+2.7
4,866,436	+				+0.8
4,866,436	+				+0.1
4,866,436	+				-0.0
4,866,436	+				+0.8
4,866,436	+				+0.5
4,866,437	-				-0.5
4,866,437	-				+0.2
4,866,437	-				-0.2
4,866,437	-				+2.2
4,866,437	-				-0.3
4,866,449	+				-0.8
4,866,449	+				-0.3
4,866,449	+				-0.4
4,866,449	+				+1.8
4,866,449	+				-0.1
4,866,450	-				+1.1
4,866,450	-				-1.0
4,866,450	-				-0.2
4,866,450	-				-0.9
4,866,604	+		DZA65_RS22505	0.38	-1.9
4,866,676	+		DZA65_RS22505	0.54	+0.7
4,866,676	+		DZA65_RS22505	0.54	+1.1
4,866,676	+		DZA65_RS22505	0.54	+1.0
4,866,677	-		DZA65_RS22505	0.54	+1.1
4,866,715	+		DZA65_RS22505	0.62	+0.1
4,866,716	-		DZA65_RS22505	0.62	+0.8
4,866,816	+		DZA65_RS22505	0.83	-0.1
4,866,816	+		DZA65_RS22505	0.83	+0.4
4,866,816	+		DZA65_RS22505	0.83	+0.6
4,866,817	-		DZA65_RS22505	0.83	+1.1
4,866,817	-		DZA65_RS22505	0.83	+0.1
4,866,817	-		DZA65_RS22505	0.83	+0.6
4,866,817	-		DZA65_RS22505	0.83	+1.0
4,866,817	-		DZA65_RS22505	0.83	-0.6
4,866,842	+		DZA65_RS22505	0.89	+0.1
4,866,842	+		DZA65_RS22505	0.89	+0.2
4,866,842	+		DZA65_RS22505	0.89	+1.1
4,866,842	+		DZA65_RS22505	0.89	-0.5
4,866,842	+		DZA65_RS22505	0.89	-0.0
4,866,842	+		DZA65_RS22505	0.89	-0.8
4,866,843	-		DZA65_RS22505	0.89	-1.7
4,866,843	-		DZA65_RS22505	0.89	+2.3
4,866,864	+				-2.4
4,866,864	+				-0.9
4,866,864	+				+1.1
4,866,864	+				-1.6
4,866,865	-				-0.7
4,866,865	-				-0.3
4,866,865	-				+1.1
4,866,865	-				+0.0
4,866,873	+				-0.6
4,866,873	+				+0.5
4,866,873	+				-0.5
4,866,873	+				-0.2
4,866,873	+				-1.1
4,866,874	-				+0.3
4,866,874	-				-0.6
4,866,874	-				+0.5
4,866,874	-				+0.1
4,866,876	+				-0.5
4,866,876	+				+0.5
4,866,876	+				+1.3
4,866,876	+				-0.5
4,866,876	+				+1.1
4,866,876	+				-0.2
4,866,877	-				+0.2
4,866,877	-				-1.2
4,866,893	+				+0.9
4,866,894	-				+0.3
4,866,909	-				-0.7
4,866,911	+				-0.5
4,866,911	+				-2.1
4,866,911	+				+1.5
4,866,911	+				-0.8
4,866,911	+				-1.1
4,866,912	-				+0.1
4,866,912	-				-0.3
4,866,912	-				-0.5
4,866,914	+				+1.7
4,866,915	-				+0.1
4,866,991	+		DZA65_RS22510	0.13	-0.2
4,866,992	-		DZA65_RS22510	0.13	+0.9
4,866,992	-				-0.5
4,867,075	-		DZA65_RS22510	0.25	+2.4
4,867,124	+		DZA65_RS22510	0.31	-1.6
4,867,124	+		DZA65_RS22510	0.31	-1.4
4,867,135	+		DZA65_RS22510	0.33	-0.7
4,867,135	+		DZA65_RS22510	0.33	+0.2
4,867,135	+		DZA65_RS22510	0.33	-0.2
4,867,135	+		DZA65_RS22510	0.33	+0.1
4,867,136	-		DZA65_RS22510	0.33	-1.5
4,867,138	+		DZA65_RS22510	0.33	-0.2
4,867,138	+		DZA65_RS22510	0.33	-1.0
4,867,138	+		DZA65_RS22510	0.33	-0.2
4,867,138	+		DZA65_RS22510	0.33	+0.3
4,867,138	+		DZA65_RS22510	0.33	+0.6
4,867,138	+		DZA65_RS22510	0.33	-0.2
4,867,152	+		DZA65_RS22510	0.35	-1.9
4,867,152	+		DZA65_RS22510	0.35	+0.3
4,867,240	+		DZA65_RS22510	0.47	+1.0
4,867,240	+		DZA65_RS22510	0.47	-1.2
4,867,240	+		DZA65_RS22510	0.47	+0.5
4,867,240	+		DZA65_RS22510	0.47	+0.1
4,867,241	-		DZA65_RS22510	0.47	-0.9
4,867,241	-		DZA65_RS22510	0.47	-0.7
4,867,241	-		DZA65_RS22510	0.47	-0.5
4,867,241	-		DZA65_RS22510	0.47	-1.7
4,867,241	-		DZA65_RS22510	0.47	+0.1
4,867,241	-		DZA65_RS22510	0.47	+0.6
4,867,296	+		DZA65_RS22510	0.55	+0.1
4,867,296	+		DZA65_RS22510	0.55	-1.3
4,867,296	+		DZA65_RS22510	0.55	+0.4
4,867,296	+		DZA65_RS22510	0.55	-0.1
4,867,296	+		DZA65_RS22510	0.55	-2.1
4,867,297	-		DZA65_RS22510	0.55	-0.3
4,867,299	+		DZA65_RS22510	0.55	-0.7
4,867,326	+		DZA65_RS22510	0.59	-1.2
4,867,326	+		DZA65_RS22510	0.59	+0.1
4,867,326	+		DZA65_RS22510	0.59	-0.3
4,867,326	+		DZA65_RS22510	0.59	-2.1
4,867,327	-		DZA65_RS22510	0.59	+0.5
4,867,327	-		DZA65_RS22510	0.59	+0.8
4,867,327	-		DZA65_RS22510	0.59	-0.7
4,867,327	-		DZA65_RS22510	0.59	-2.4
4,867,351	+		DZA65_RS22510	0.62	-2.1
4,867,351	+		DZA65_RS22510	0.62	-0.9
4,867,351	+		DZA65_RS22510	0.62	-0.7
4,867,351	+		DZA65_RS22510	0.62	+2.8
4,867,351	+		DZA65_RS22510	0.62	+2.6
4,867,351	+		DZA65_RS22510	0.62	+1.2
4,867,351	+		DZA65_RS22510	0.62	-1.9
4,867,351	+		DZA65_RS22510	0.62	+1.4
4,867,351	+		DZA65_RS22510	0.62	-2.8
4,867,351	+		DZA65_RS22510	0.62	-0.9
4,867,351	+		DZA65_RS22510	0.62	+0.7
4,867,351	+		DZA65_RS22510	0.62	+0.4
4,867,351	+		DZA65_RS22510	0.62	+1.1
4,867,351	+		DZA65_RS22510	0.62	+0.0
4,867,352	-		DZA65_RS22510	0.62	-0.8
4,867,352	-		DZA65_RS22510	0.62	-1.7
4,867,352	-		DZA65_RS22510	0.62	+1.6
4,867,352	-		DZA65_RS22510	0.62	+1.2
4,867,352	-		DZA65_RS22510	0.62	+1.6
4,867,352	-		DZA65_RS22510	0.62	+0.7
4,867,352	-		DZA65_RS22510	0.62	+0.3
4,867,352	-		DZA65_RS22510	0.62	-1.2
4,867,352	-		DZA65_RS22510	0.62	-0.8
4,867,352	-		DZA65_RS22510	0.62	-0.0
4,867,352	-		DZA65_RS22510	0.62	-1.8
4,867,352	-		DZA65_RS22510	0.62	+0.1
4,867,375	-		DZA65_RS22510	0.66	-0.6
4,867,558	+				+0.4
4,867,559	-				-0.3
4,867,582	+				+2.4
4,867,582	+				-0.9
4,867,582	+				+0.1
4,867,582	+				+1.6
4,867,583	-				+1.4
4,867,583	-				+1.2
4,867,583	-				+0.1
4,867,583	-				-0.1
4,867,583	-				+0.4
4,867,624	+				-0.9
4,867,624	+				-0.3
4,867,624	+				+0.1
4,867,624	+				+1.0
4,867,624	+				+1.1
4,867,625	-				-0.0
4,867,625	-				-0.7
4,867,625	-				-0.9
4,867,625	-				+0.7
4,867,625	-				+0.4
4,867,749	+		DZA65_RS22515	0.10	+0.1
4,867,749	+		DZA65_RS22515	0.10	-0.8
4,867,750	-		DZA65_RS22515	0.10	+0.8
4,867,750	-		DZA65_RS22515	0.10	-0.3
4,867,809	+		DZA65_RS22515	0.15	-0.5
4,867,809	+		DZA65_RS22515	0.15	-0.9
4,867,809	+		DZA65_RS22515	0.15	-2.4
4,867,809	+		DZA65_RS22515	0.15	+0.3
4,867,809	+		DZA65_RS22515	0.15	-0.7
4,867,809	+		DZA65_RS22515	0.15	+0.7
4,867,809	+		DZA65_RS22515	0.15	-0.2
4,867,809	+		DZA65_RS22515	0.15	-1.7
4,867,809	+		DZA65_RS22515	0.15	-0.7
4,867,810	-		DZA65_RS22515	0.15	-0.5
4,867,810	-		DZA65_RS22515	0.15	-1.7
4,867,810	-		DZA65_RS22515	0.15	-0.6
4,867,810	-		DZA65_RS22515	0.15	+1.5
4,867,811	+		DZA65_RS22515	0.15	+1.1
4,867,811	+		DZA65_RS22515	0.15	+1.3
4,867,812	-		DZA65_RS22515	0.15	-0.6