Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21495

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,649,419	+		DZA65_RS21490	0.15	-0.6
4,649,419	+		DZA65_RS21490	0.15	-1.7
4,649,420	-		DZA65_RS21490	0.15	-0.8
4,649,420	-		DZA65_RS21490	0.15	-1.2
4,649,443	-		DZA65_RS21490	0.17	+0.9
4,649,491	-		DZA65_RS21490	0.21	+0.1
4,649,554	+		DZA65_RS21490	0.27	+1.7
4,649,555	-		DZA65_RS21490	0.27	-0.4
4,649,641	-		DZA65_RS21490	0.35	+0.1
4,649,641	-		DZA65_RS21490	0.35	-0.5
4,649,742	+		DZA65_RS21490	0.45	+0.1
4,649,753	+		DZA65_RS21490	0.46	-0.7
4,649,753	+		DZA65_RS21490	0.46	+1.0
4,649,754	-		DZA65_RS21490	0.46	+0.5
4,649,754	-		DZA65_RS21490	0.46	+0.6
4,649,754	-		DZA65_RS21490	0.46	+1.1
4,649,754	-		DZA65_RS21490	0.46	+0.0
4,649,754	-		DZA65_RS21490	0.46	-0.3
4,649,754	-		DZA65_RS21490	0.46	+1.1
4,649,754	-		DZA65_RS21490	0.46	-1.5
4,649,754	-		DZA65_RS21490	0.46	-0.7
4,649,763	+		DZA65_RS21490	0.47	-0.8
4,649,763	+		DZA65_RS21490	0.47	+1.2
4,649,763	+		DZA65_RS21490	0.47	+0.3
4,649,764	-		DZA65_RS21490	0.47	-0.5
4,649,764	-		DZA65_RS21490	0.47	-0.7
4,649,794	+		DZA65_RS21490	0.50	-0.4
4,649,794	+		DZA65_RS21490	0.50	+1.4
4,649,794	+		DZA65_RS21490	0.50	-0.7
4,649,794	+		DZA65_RS21490	0.50	+0.1
4,649,794	+		DZA65_RS21490	0.50	-1.2
4,649,794	+		DZA65_RS21490	0.50	+0.0
4,649,795	-		DZA65_RS21490	0.50	-0.4
4,649,795	-		DZA65_RS21490	0.50	-0.8
4,649,795	-		DZA65_RS21490	0.50	+0.3
4,649,829	+		DZA65_RS21490	0.53	+0.4
4,649,871	-		DZA65_RS21490	0.57	-0.4
4,649,878	+		DZA65_RS21490	0.57	-0.1
4,649,878	+		DZA65_RS21490	0.57	+0.0
4,649,878	+		DZA65_RS21490	0.57	-0.1
4,649,878	+		DZA65_RS21490	0.57	+1.4
4,649,878	+		DZA65_RS21490	0.57	-0.6
4,649,878	+		DZA65_RS21490	0.57	-0.8
4,649,878	+		DZA65_RS21490	0.57	-1.1
4,649,879	-		DZA65_RS21490	0.58	+1.1
4,649,879	-		DZA65_RS21490	0.58	-0.2
4,649,879	-		DZA65_RS21490	0.58	-0.0
4,649,879	-		DZA65_RS21490	0.58	+0.1
4,649,879	-		DZA65_RS21490	0.58	-0.3
4,649,879	-		DZA65_RS21490	0.58	-0.2
4,649,879	-		DZA65_RS21490	0.58	-0.9
4,649,879	-		DZA65_RS21490	0.58	-0.2
4,649,879	-		DZA65_RS21490	0.58	-0.1
4,649,880	+		DZA65_RS21490	0.58	-0.3
4,649,880	+		DZA65_RS21490	0.58	-0.8
4,649,880	+		DZA65_RS21490	0.58	-0.3
4,649,880	+		DZA65_RS21490	0.58	+1.1
4,649,880	+		DZA65_RS21490	0.58	-0.0
4,649,880	+		DZA65_RS21490	0.58	-0.1
4,649,880	+		DZA65_RS21490	0.58	-0.1
4,649,880	+		DZA65_RS21490	0.58	-0.3
4,649,880	+		DZA65_RS21490	0.58	-0.5
4,649,880	+		DZA65_RS21490	0.58	-2.1
4,649,880	+		DZA65_RS21490	0.58	+0.6
4,649,880	+		DZA65_RS21490	0.58	+1.3
4,649,880	+		DZA65_RS21490	0.58	+1.3
4,649,881	-		DZA65_RS21490	0.58	-1.2
4,649,881	-		DZA65_RS21490	0.58	-0.5
4,649,881	-		DZA65_RS21490	0.58	-0.5
4,649,881	-		DZA65_RS21490	0.58	+1.1
4,649,881	-		DZA65_RS21490	0.58	-0.7
4,649,881	-		DZA65_RS21490	0.58	+1.1
4,649,881	-		DZA65_RS21490	0.58	-1.2
4,649,881	-		DZA65_RS21490	0.58	+0.3
4,649,881	-		DZA65_RS21490	0.58	-0.2
4,649,881	-		DZA65_RS21490	0.58	+1.1
4,649,881	-		DZA65_RS21490	0.58	-0.3
4,649,881	-		DZA65_RS21490	0.58	+0.5
4,649,881	-		DZA65_RS21490	0.58	+1.0
4,649,881	-		DZA65_RS21490	0.58	-0.4
4,649,881	-		DZA65_RS21490	0.58	+0.1
4,649,923	+		DZA65_RS21490	0.62	+0.7
4,649,923	+		DZA65_RS21490	0.62	-1.9
4,649,923	+		DZA65_RS21490	0.62	-1.5
4,649,923	+		DZA65_RS21490	0.62	+0.3
4,649,923	+		DZA65_RS21490	0.62	-1.5
4,649,923	+		DZA65_RS21490	0.62	+0.1
4,649,923	+		DZA65_RS21490	0.62	+2.7
4,649,923	+		DZA65_RS21490	0.62	+1.1
4,649,923	+		DZA65_RS21490	0.62	-0.3
4,649,923	+		DZA65_RS21490	0.62	-0.3
4,649,923	+		DZA65_RS21490	0.62	+0.2
4,649,923	+		DZA65_RS21490	0.62	-1.3
4,649,924	-		DZA65_RS21490	0.62	+1.1
4,649,924	-		DZA65_RS21490	0.62	+0.7
4,649,924	-		DZA65_RS21490	0.62	-1.6
4,649,924	-		DZA65_RS21490	0.62	+3.2
4,649,924	-		DZA65_RS21490	0.62	-0.9
4,649,924	-		DZA65_RS21490	0.62	+1.7
4,649,924	-		DZA65_RS21490	0.62	+2.1
4,649,924	-		DZA65_RS21490	0.62	-0.9
4,649,947	+		DZA65_RS21490	0.64	-0.8
4,649,947	+		DZA65_RS21490	0.64	-3.4
4,649,948	-		DZA65_RS21490	0.64	-0.1
4,649,948	-		DZA65_RS21490	0.64	-1.2
4,650,163	+		DZA65_RS21490	0.84	-0.7
4,650,188	+		DZA65_RS21490	0.86	-0.7
4,650,188	+		DZA65_RS21490	0.86	+0.3
4,650,188	+		DZA65_RS21490	0.86	+0.1
4,650,188	+		DZA65_RS21490	0.86	+0.8
4,650,188	+		DZA65_RS21490	0.86	-0.3
4,650,188	+		DZA65_RS21490	0.86	-0.6
4,650,188	+		DZA65_RS21490	0.86	-0.9
4,650,188	+		DZA65_RS21490	0.86	-0.7
4,650,188	+		DZA65_RS21490	0.86	-0.0
4,650,188	+		DZA65_RS21490	0.86	-1.7
4,650,188	+		DZA65_RS21490	0.86	-1.2
4,650,188	+		DZA65_RS21490	0.86	+0.1
4,650,188	+		DZA65_RS21490	0.86	+2.0
4,650,188	+		DZA65_RS21490	0.86	+0.5
4,650,188	+		DZA65_RS21490	0.86	-0.3
4,650,188	+		DZA65_RS21490	0.86	+0.3
4,650,189	-		DZA65_RS21490	0.86	-0.4
4,650,189	-		DZA65_RS21490	0.86	-0.7
4,650,189	-		DZA65_RS21490	0.86	+0.1
4,650,189	-		DZA65_RS21490	0.86	+1.1
4,650,189	-		DZA65_RS21490	0.86	-0.7
4,650,189	-		DZA65_RS21490	0.86	-0.7
4,650,189	-		DZA65_RS21490	0.86	-0.3
4,650,189	-		DZA65_RS21490	0.86	+0.5
4,650,189	-		DZA65_RS21490	0.86	+0.1
4,650,189	-		DZA65_RS21490	0.86	-0.2
4,650,191	+		DZA65_RS21490	0.87	-0.9
4,650,191	+		DZA65_RS21490	0.87	-0.4
4,650,191	+		DZA65_RS21490	0.87	-0.1
4,650,192	-		DZA65_RS21490	0.87	-0.0
4,650,192	-		DZA65_RS21490	0.87	-0.5
4,650,192	-		DZA65_RS21490	0.87	+1.7
4,650,192	-		DZA65_RS21490	0.87	+0.0
4,650,192	-		DZA65_RS21490	0.87	-0.3
4,650,270	+				+0.5
4,650,271	-				+0.4
4,650,271	-				-1.6
4,650,271	-				+0.4
4,650,303	+				-0.6
4,650,341	+				-0.2
4,650,342	-				-1.7
4,650,357	+				+0.1
4,650,357	+				-2.4
4,650,400	+				-2.1
4,650,400	+				-0.4
4,650,400	+				-1.2
4,650,400	+				-0.8
4,650,400	+				-1.2
4,650,400	+				-0.9
4,650,400	+				-2.6
4,650,400	+				-1.9
4,650,799	+		DZA65_RS21495	0.45	-0.7
4,650,799	+		DZA65_RS21495	0.45	+1.1
4,650,799	+		DZA65_RS21495	0.45	-1.4
4,650,799	+		DZA65_RS21495	0.45	-1.1
4,650,799	+		DZA65_RS21495	0.45	-1.4
4,650,799	+		DZA65_RS21495	0.45	+0.1
4,650,799	+		DZA65_RS21495	0.45	-0.1
4,650,799	+		DZA65_RS21495	0.45	-0.5
4,650,799	+		DZA65_RS21495	0.45	+0.7
4,650,800	-		DZA65_RS21495	0.45	-2.9
4,650,800	-		DZA65_RS21495	0.45	-1.5
4,650,800	-		DZA65_RS21495	0.45	-1.2
4,650,800	-		DZA65_RS21495	0.45	-2.1
4,650,800	-		DZA65_RS21495	0.45	-0.0
4,650,882	+		DZA65_RS21495	0.53	-2.4
4,650,906	+		DZA65_RS21495	0.56	-1.0
4,650,942	+		DZA65_RS21495	0.60	-0.5
4,650,942	+		DZA65_RS21495	0.60	+0.7
4,650,942	+		DZA65_RS21495	0.60	+0.4
4,650,942	+		DZA65_RS21495	0.60	+0.8
4,650,942	+		DZA65_RS21495	0.60	-0.9
4,650,942	+		DZA65_RS21495	0.60	-2.7
4,650,943	-		DZA65_RS21495	0.60	-1.2
4,650,943	-		DZA65_RS21495	0.60	+0.8
4,650,943	-		DZA65_RS21495	0.60	+0.5
4,650,943	-		DZA65_RS21495	0.60	+0.2
4,651,212	+		DZA65_RS21495	0.89	+0.7
4,651,213	-		DZA65_RS21495	0.89	-1.3
4,651,225	+				+0.1
4,651,236	+				-0.7
4,651,340	+				-0.5
4,651,341	-				-1.6
4,651,349	+				+0.8
4,651,350	-				-0.5
4,651,350	-				-0.9
4,651,350	-				-0.2
4,651,350	-				-0.8
4,651,350	-				+2.8
4,651,385	-				-1.1
4,651,394	-				-0.8
4,651,413	+				-0.5
4,651,413	+				-0.5
4,651,413	+				-0.5
4,651,413	+				+1.4
4,651,413	+				-0.4
4,651,413	+				+2.9
4,651,414	-				-0.8
4,651,414	-				+2.1
4,651,414	-				-0.1
4,651,420	-				+2.4
4,651,420	-				+0.7
4,651,479	+		DZA65_RS21500	0.15	-0.7
4,651,479	+		DZA65_RS21500	0.15	+0.1
4,651,480	-		DZA65_RS21500	0.15	-0.3
4,651,503	+		DZA65_RS21500	0.19	-0.7
4,651,504	-		DZA65_RS21500	0.20	+0.4
4,651,504	-		DZA65_RS21500	0.20	-0.8
4,651,504	-		DZA65_RS21500	0.20	-0.9
4,651,514	+		DZA65_RS21500	0.21	-1.5
4,651,514	+		DZA65_RS21500	0.21	-0.5
4,651,514	+		DZA65_RS21500	0.21	-0.6
4,651,514	+		DZA65_RS21500	0.21	-0.9
4,651,515	-		DZA65_RS21500	0.22	+1.7
4,651,515	-		DZA65_RS21500	0.22	+0.6
4,651,515	-		DZA65_RS21500	0.22	+0.3
4,651,515	-		DZA65_RS21500	0.22	-1.5
4,651,515	-		DZA65_RS21500	0.22	-0.9
4,651,784	+		DZA65_RS21500	0.72	+1.8
4,651,819	+		DZA65_RS21500	0.79	+0.4
4,651,827	+		DZA65_RS21500	0.80	-0.8
4,651,828	-		DZA65_RS21500	0.81	-0.5
4,651,828	-		DZA65_RS21500	0.81	+0.8
4,651,861	+		DZA65_RS21500	0.87	+1.7
4,651,873	+		DZA65_RS21500	0.89	+0.3
4,651,873	+		DZA65_RS21500	0.89	-0.9
4,651,873	+		DZA65_RS21500	0.89	+0.2
4,651,874	-		DZA65_RS21500	0.89	-1.4
4,651,874	-		DZA65_RS21500	0.89	-0.1
4,651,883	+				-1.5
4,651,883	+				-0.2
4,651,883	+				+0.8
4,651,883	+				-1.2
4,651,883	+				-0.7
4,651,883	+				+1.4
4,651,883	+				-0.2
4,651,884	-				+0.8
4,651,884	-				-0.2
4,651,884	-				+0.4
4,651,884	-				+0.4
4,651,884	-				-0.2
4,651,884	-				-1.3
4,651,884	-				-0.3
4,651,884	-				-1.8
4,651,884	-				+0.5
4,651,884	-				-0.9
4,651,914	+				+1.3
4,651,915	-				-0.5
4,651,928	+				+1.1
4,651,929	-				+0.5
4,651,939	+				+0.7
4,651,939	+				+2.4
4,651,939	+				+0.4
4,651,939	+				+0.2
4,651,939	+				-0.9
4,651,939	+				+0.0
4,651,940	-				-0.9
4,651,940	-				+0.4
4,651,940	-				+0.1
4,651,940	-				+0.1
4,651,940	-				-2.0
4,651,940	-				-0.8
4,651,940	-				-0.3
4,651,940	-				+1.2
4,651,940	-				-0.9
4,651,940	-				+1.8
4,651,940	-				-1.1
4,651,965	+				+0.7
4,651,965	+				-0.3
4,651,965	+				+0.1
4,651,966	-				-0.5
4,651,966	-				+1.5
4,651,981	+				-0.5
4,651,981	+				+1.3
4,651,981	+				-1.7
4,651,981	+				-1.2
4,651,981	+				+1.7
4,651,981	+				-0.3
4,651,981	+				+0.1
4,651,982	-				-2.4
4,651,982	-				-1.1
4,651,982	-				-0.2
4,651,985	+				+0.1
4,651,985	+				+1.1
4,651,985	+				-2.0
4,651,985	+				+0.0
4,651,985	+				-0.1
4,651,985	+				+0.3
4,651,985	+				-1.1
4,651,985	+				-0.2
4,651,985	+				-0.1
4,651,985	+				+1.2
4,651,985	+				+1.1
4,651,985	+				-0.9
4,651,985	+				+1.1
4,651,985	+				-0.5
4,651,985	+				+1.1
4,651,985	+				-1.5
4,651,985	+				+0.1
4,651,985	+				+0.7
4,651,985	+				+0.1
4,651,985	+				-0.4
4,651,986	-				+3.7
4,651,986	-				-0.6
4,651,986	-				-0.8
4,651,986	-				+0.3
4,651,986	-				+1.7
4,651,986	-				-0.9
4,651,986	-				+0.1
4,651,986	-				-1.2
4,651,986	-				+0.2
4,651,986	-				+0.4
4,651,986	-				-1.2
4,651,986	-				+0.2
4,652,211	-		DZA65_RS21505	0.20	-0.3
4,652,236	+		DZA65_RS21505	0.22	+1.4