Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21030

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,547,233	-				+0.6
4,547,275	+				-1.8
4,547,276	-				+1.3
4,547,276	-				-0.9
4,547,276	-				+0.2
4,547,283	+				-0.5
4,547,283	+				+0.1
4,547,284	-				-1.3
4,547,329	-				+0.7
4,547,329	-				+1.1
4,547,343	+				+1.4
4,547,343	+				+0.6
4,547,344	-				-0.1
4,547,344	-				-2.3
4,547,344	-				-0.3
4,547,398	+		DZA65_RS21025	0.11	-0.9
4,547,398	+		DZA65_RS21025	0.11	-0.8
4,547,398	+		DZA65_RS21025	0.11	-1.8
4,547,398	+		DZA65_RS21025	0.11	-0.8
4,547,398	+		DZA65_RS21025	0.11	+0.1
4,547,398	+		DZA65_RS21025	0.11	-0.1
4,547,398	+		DZA65_RS21025	0.11	+0.8
4,547,398	+		DZA65_RS21025	0.11	+0.6
4,547,398	+		DZA65_RS21025	0.11	+0.6
4,547,399	-		DZA65_RS21025	0.11	-0.3
4,547,399	-		DZA65_RS21025	0.11	+0.2
4,547,399	-		DZA65_RS21025	0.11	-1.8
4,547,399	-		DZA65_RS21025	0.11	-0.4
4,547,399	-		DZA65_RS21025	0.11	+0.7
4,547,399	-		DZA65_RS21025	0.11	+0.5
4,547,399	-		DZA65_RS21025	0.11	+0.4
4,547,399	-		DZA65_RS21025	0.11	-1.9
4,547,399	-		DZA65_RS21025	0.11	+0.5
4,547,463	+		DZA65_RS21025	0.19	-0.3
4,547,464	-		DZA65_RS21025	0.19	-0.2
4,547,464	-				+1.6
4,547,464	-		DZA65_RS21025	0.19	-0.8
4,547,464	-		DZA65_RS21025	0.19	+0.7
4,547,506	+		DZA65_RS21025	0.24	-0.1
4,547,506	+		DZA65_RS21025	0.24	+1.1
4,547,507	-		DZA65_RS21025	0.24	-0.5
4,547,507	-		DZA65_RS21025	0.24	+0.3
4,547,728	-		DZA65_RS21025	0.52	-2.0
4,547,803	-		DZA65_RS21025	0.61	-1.4
4,547,832	+		DZA65_RS21025	0.65	+1.0
4,547,832	+		DZA65_RS21025	0.65	-0.4
4,547,832	+		DZA65_RS21025	0.65	-0.2
4,547,832	+		DZA65_RS21025	0.65	-1.9
4,547,832	+		DZA65_RS21025	0.65	+0.4
4,547,832	+		DZA65_RS21025	0.65	+1.1
4,547,833	-		DZA65_RS21025	0.65	+0.7
4,547,833	-		DZA65_RS21025	0.65	+0.9
4,547,833	-		DZA65_RS21025	0.65	-0.4
4,547,833	-		DZA65_RS21025	0.65	+0.7
4,547,905	+		DZA65_RS21025	0.74	+0.2
4,547,906	-		DZA65_RS21025	0.74	-0.8
4,547,906	-		DZA65_RS21025	0.74	-0.2
4,547,906	-		DZA65_RS21025	0.74	-1.1
4,547,906	-		DZA65_RS21025	0.74	+0.8
4,547,906	-		DZA65_RS21025	0.74	+0.2
4,547,929	+		DZA65_RS21025	0.77	+0.5
4,547,929	+		DZA65_RS21025	0.77	-0.4
4,547,929	+		DZA65_RS21025	0.77	-0.1
4,547,929	+		DZA65_RS21025	0.77	-0.5
4,547,929	+		DZA65_RS21025	0.77	+0.1
4,547,929	+		DZA65_RS21025	0.77	+1.9
4,547,929	+		DZA65_RS21025	0.77	-0.4
4,547,929	+		DZA65_RS21025	0.77	-1.3
4,547,929	+		DZA65_RS21025	0.77	-1.2
4,547,929	+		DZA65_RS21025	0.77	-0.7
4,547,930	-		DZA65_RS21025	0.77	+0.1
4,547,930	-		DZA65_RS21025	0.77	+1.3
4,547,930	-		DZA65_RS21025	0.77	+1.6
4,547,930	-		DZA65_RS21025	0.77	-1.4
4,547,930	-		DZA65_RS21025	0.77	+0.1
4,547,937	+		DZA65_RS21025	0.78	-0.4
4,547,937	+		DZA65_RS21025	0.78	-0.5
4,547,937	+		DZA65_RS21025	0.78	+0.5
4,547,937	+		DZA65_RS21025	0.78	-0.5
4,547,937	+		DZA65_RS21025	0.78	+0.6
4,547,937	+		DZA65_RS21025	0.78	+0.1
4,547,937	+		DZA65_RS21025	0.78	-0.5
4,547,937	+		DZA65_RS21025	0.78	+2.4
4,547,938	-		DZA65_RS21025	0.78	-0.3
4,547,938	-		DZA65_RS21025	0.78	+0.1
4,547,938	-		DZA65_RS21025	0.78	-1.5
4,547,938	-		DZA65_RS21025	0.78	+0.9
4,547,938	-		DZA65_RS21025	0.78	+1.1
4,547,938	-		DZA65_RS21025	0.78	-1.5
4,547,981	-		DZA65_RS21025	0.83	+0.6
4,548,051	+				+0.6
4,548,051	+				+3.2
4,548,051	+				-1.3
4,548,051	+				-0.3
4,548,051	+				+0.5
4,548,052	-				-0.4
4,548,114	+				-0.9
4,548,115	-				-0.5
4,548,115	-				+0.1
4,548,118	+				-0.8
4,548,118	+				-1.3
4,548,118	+				-2.3
4,548,118	+				-0.2
4,548,118	+				+0.2
4,548,118	+				-1.3
4,548,118	+				-0.4
4,548,118	+				-0.9
4,548,118	+				+0.5
4,548,118	+				+0.5
4,548,118	+				+0.5
4,548,118	+				-1.3
4,548,118	+				+0.4
4,548,118	+				+0.0
4,548,118	+				-0.6
4,548,118	+				-0.4
4,548,118	+				+0.6
4,548,118	+				-0.9
4,548,118	+				+1.8
4,548,118	+				+0.6
4,548,118	+				-0.8
4,548,118	+				+2.1
4,548,118	+				+1.4
4,548,118	+				-0.3
4,548,118	+				-1.5
4,548,118	+				-0.9
4,548,118	+				+1.0
4,548,118	+				+1.1
4,548,118	+				-0.5
4,548,119	-				+0.3
4,548,119	-				+0.5
4,548,119	-				-0.3
4,548,119	-				-0.9
4,548,119	-				+2.1
4,548,119	-				-0.5
4,548,119	-				+0.3
4,548,119	-				-0.9
4,548,119	-				-0.3
4,548,119	-				-0.6
4,548,119	-				+0.5
4,548,119	-				+0.3
4,548,119	-				+1.3
4,548,119	-				-0.6
4,548,119	-				+0.2
4,548,119	-				-0.3
4,548,119	-				+0.8
4,548,119	-				+0.2
4,548,119	-				-1.3
4,548,119	-				+0.9
4,548,119	-				+0.8
4,548,119	-				-0.2
4,548,119	-				+1.1
4,548,119	-				-2.1
4,548,169	+				-0.8
4,548,169	+				-0.2
4,548,169	+				+0.1
4,548,169	+				+2.6
4,548,169	+				+3.3
4,548,169	+				+0.4
4,548,169	+				+0.1
4,548,169	+				-1.9
4,548,169	+				+0.8
4,548,170	-				-0.9
4,548,170	-				+2.4
4,548,170	-				+1.1
4,548,170	-				-0.6
4,548,172	+				-0.3
4,548,172	+				+0.2
4,548,173	-				-0.5
4,548,173	-				+0.7
4,548,173	-				+0.8
4,548,178	+				+0.3
4,548,178	+				+0.2
4,548,178	+				-0.5
4,548,178	+				-1.2
4,548,179	-				-0.5
4,548,179	-				-0.3
4,548,179	-				-0.4
4,548,179	-				-0.5
4,548,179	-				+0.8
4,548,179	-				+0.7
4,548,179	-				-1.3
4,548,271	+		DZA65_RS21030	0.10	-1.1
4,548,272	-		DZA65_RS21030	0.10	+0.4
4,548,272	-		DZA65_RS21030	0.10	+1.5
4,548,272	-		DZA65_RS21030	0.10	-0.9
4,548,272	-		DZA65_RS21030	0.10	-0.9
4,548,272	-		DZA65_RS21030	0.10	-0.7
4,548,272	-		DZA65_RS21030	0.10	-0.6
4,548,272	-		DZA65_RS21030	0.10	-1.3
4,548,451	+		DZA65_RS21030	0.28	-0.5
4,548,451	+		DZA65_RS21030	0.28	-0.5
4,548,451	+		DZA65_RS21030	0.28	-0.4
4,548,451	+		DZA65_RS21030	0.28	+0.6
4,548,451	+		DZA65_RS21030	0.28	-0.0
4,548,451	+		DZA65_RS21030	0.28	-0.4
4,548,451	+		DZA65_RS21030	0.28	+0.5
4,548,451	+		DZA65_RS21030	0.28	-0.4
4,548,451	+		DZA65_RS21030	0.28	-2.2
4,548,451	+		DZA65_RS21030	0.28	-0.7
4,548,452	-		DZA65_RS21030	0.28	-1.0
4,548,452	-		DZA65_RS21030	0.28	+1.2
4,548,452	-		DZA65_RS21030	0.28	-1.1
4,548,452	-		DZA65_RS21030	0.28	-0.4
4,548,452	-		DZA65_RS21030	0.28	-0.1
4,548,452	-		DZA65_RS21030	0.28	-0.5
4,548,490	+		DZA65_RS21030	0.32	-1.5
4,548,490	+		DZA65_RS21030	0.32	-0.2
4,548,491	-		DZA65_RS21030	0.32	-0.8
4,548,491	-		DZA65_RS21030	0.32	-0.8
4,548,546	-		DZA65_RS21030	0.38	-0.5
4,548,583	+		DZA65_RS21030	0.41	-1.1
4,548,583	+		DZA65_RS21030	0.41	-1.9
4,548,583	+		DZA65_RS21030	0.41	+0.5
4,548,584	-		DZA65_RS21030	0.42	+0.3
4,548,584	-		DZA65_RS21030	0.42	+0.2
4,548,584	-		DZA65_RS21030	0.42	+2.9
4,548,584	-		DZA65_RS21030	0.42	-0.3
4,548,584	-		DZA65_RS21030	0.42	-0.0
4,548,586	+		DZA65_RS21030	0.42	-2.1
4,548,586	+		DZA65_RS21030	0.42	-0.4
4,548,586	+		DZA65_RS21030	0.42	-0.5
4,548,586	+		DZA65_RS21030	0.42	+0.3
4,548,586	+		DZA65_RS21030	0.42	+0.1
4,548,587	-		DZA65_RS21030	0.42	-1.9
4,548,587	-		DZA65_RS21030	0.42	-1.8
4,548,587	-		DZA65_RS21030	0.42	-1.5
4,548,587	-		DZA65_RS21030	0.42	-0.5
4,548,587	-		DZA65_RS21030	0.42	+0.1
4,548,587	-		DZA65_RS21030	0.42	+0.2
4,548,773	+		DZA65_RS21030	0.61	-0.6
4,548,773	+		DZA65_RS21030	0.61	+0.2
4,548,774	-		DZA65_RS21030	0.61	+1.1
4,548,774	-		DZA65_RS21030	0.61	-0.1
4,548,776	-		DZA65_RS21030	0.61	-0.2
4,548,826	+		DZA65_RS21030	0.66	+0.3
4,548,826	+		DZA65_RS21030	0.66	-0.8
4,548,826	+		DZA65_RS21030	0.66	-1.7
4,548,826	+		DZA65_RS21030	0.66	-0.1
4,548,827	-		DZA65_RS21030	0.66	-0.5
4,548,827	-		DZA65_RS21030	0.66	+0.5
4,548,827	-		DZA65_RS21030	0.66	-2.3
4,548,842	+		DZA65_RS21030	0.68	+1.2
4,548,842	+		DZA65_RS21030	0.68	+1.1
4,548,842	+		DZA65_RS21030	0.68	-0.8
4,548,843	-		DZA65_RS21030	0.68	-0.5
4,548,843	-		DZA65_RS21030	0.68	-0.4
4,548,941	-		DZA65_RS21030	0.78	+0.6
4,548,955	+		DZA65_RS21030	0.79	-1.8
4,548,956	-		DZA65_RS21030	0.79	-0.3
4,548,956	-		DZA65_RS21030	0.79	-2.6
4,548,964	+		DZA65_RS21030	0.80	+1.6
4,548,964	+		DZA65_RS21030	0.80	+0.1
4,548,964	+		DZA65_RS21030	0.80	+0.5
4,548,964	+		DZA65_RS21030	0.80	-1.8
4,548,964	+		DZA65_RS21030	0.80	-0.3
4,548,965	-		DZA65_RS21030	0.80	+0.1
4,548,965	-		DZA65_RS21030	0.80	+0.9
4,548,965	-		DZA65_RS21030	0.80	-0.4
4,548,965	-		DZA65_RS21030	0.80	+1.1
4,548,965	-		DZA65_RS21030	0.80	+1.4
4,548,965	-		DZA65_RS21030	0.80	+1.2
4,548,965	-				+2.1
4,549,041	+		DZA65_RS21030	0.88	-0.9
4,549,041	+		DZA65_RS21030	0.88	+0.7
4,549,041	+		DZA65_RS21030	0.88	+0.3
4,549,041	+		DZA65_RS21030	0.88	-0.3
4,549,042	-		DZA65_RS21030	0.88	+0.1
4,549,042	-		DZA65_RS21030	0.88	-1.6
4,549,042	-		DZA65_RS21030	0.88	-0.1
4,549,179	+				+1.1
4,549,180	-				-1.1
4,549,212	+				-0.4
4,549,233	+				-0.8
4,549,233	+				+2.4
4,549,233	+				-0.6
4,549,233	+				+1.0
4,549,234	-				+1.6
4,549,234	-				+1.1
4,549,234	-				-1.3
4,549,234	-				-0.6
4,549,234	-				-3.3
4,549,234	-				-0.7
4,549,234	-				+0.2
4,549,234	-				-0.1
4,549,234	-				+0.7
4,549,235	+				+0.1
4,549,235	+				+0.5
4,549,269	-				+1.0
4,549,323	-				+0.9
4,549,323	-				+0.8
4,549,323	-				-0.3
4,549,323	-				+0.9
4,549,338	+				+0.6
4,549,338	+				-1.3
4,549,338	+				-0.5
4,549,338	+				+0.7
4,549,338	+				+0.5
4,549,338	+				+0.1
4,549,339	-				-1.3
4,549,339	-				-2.3
4,549,339	-				+1.1
4,549,516	+		DZA65_RS21035	0.35	+1.9
4,549,516	+		DZA65_RS21035	0.35	+3.1
4,549,541	+		DZA65_RS21035	0.39	+0.3
4,549,541	+		DZA65_RS21035	0.39	-1.1
4,549,542	-		DZA65_RS21035	0.39	+0.2
4,549,612	+		DZA65_RS21035	0.51	-1.3
4,549,705	+		DZA65_RS21035	0.66	-0.3
4,549,705	+		DZA65_RS21035	0.66	-0.3
4,549,705	+		DZA65_RS21035	0.66	-0.5
4,549,706	-		DZA65_RS21035	0.66	+1.1
4,549,708	+		DZA65_RS21035	0.66	-0.6
4,549,736	+		DZA65_RS21035	0.71	+0.1
4,549,736	+		DZA65_RS21035	0.71	-0.4
4,549,736	+		DZA65_RS21035	0.71	-0.9
4,549,737	-		DZA65_RS21035	0.71	+0.9
4,549,737	-		DZA65_RS21035	0.71	-0.3
4,549,737	-		DZA65_RS21035	0.71	+0.3
4,549,737	-		DZA65_RS21035	0.71	+0.2
4,549,737	-		DZA65_RS21035	0.71	-0.4
4,549,791	-		DZA65_RS21035	0.79	+0.6
4,549,791	-		DZA65_RS21035	0.79	+0.8
4,549,851	+		DZA65_RS21035	0.89	+0.8
4,549,851	+		DZA65_RS21035	0.89	-1.3
4,549,851	+		DZA65_RS21035	0.89	+0.6
4,549,851	+		DZA65_RS21035	0.89	+1.3
4,549,852	-		DZA65_RS21035	0.89	+1.4
4,549,938	+				+0.1
4,549,938	+				+0.1
4,549,938	+				+0.1
4,549,938	+				-1.5
4,549,938	+				-2.5
4,549,938	+				+0.6
4,549,938	+				-0.6
4,549,938	+				+3.4
4,549,938	+				-2.3
4,549,938	+				+4.7
4,549,939	-				+0.4
4,549,939	-				+3.1
4,549,948	+				-0.8
4,549,948	+				-0.2
4,549,948	+				-0.2
4,549,948	+				-0.0
4,549,948	+				-2.8
4,549,948	+				+0.1
4,549,948	+				+2.2
4,549,948	+				-0.6
4,549,949	-				+0.1
4,549,950	+				-0.1
4,549,950	+				+1.1
4,549,950	+				+2.1
4,549,950	+				+1.9
4,549,950	+				+0.1
4,549,950	+				+0.8
4,549,950	+				+1.5
4,549,950	+				-0.5
4,549,950	+				-0.3
4,549,950	+				+1.1
4,549,950	+				+1.1
4,549,951	-				+0.2
4,549,951	-				+1.1
4,549,951	-				+2.1
4,549,951	-				-0.9
4,549,951	-				+0.1
4,549,951	-				+0.5
4,549,951	-				+0.1
4,549,951	-				+0.2
4,549,951	-				-0.3
4,550,008	+				-0.1
4,550,008	+				+1.1
4,550,009	-				+0.3
4,550,009	-				+0.6
4,550,014	-				+0.2
4,550,014	-				+0.5
4,550,025	+				+1.2