Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20030

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,331,590	+		DZA65_RS20025	0.39	+1.0
4,331,590	+		DZA65_RS20025	0.39	-1.0
4,331,590	+		DZA65_RS20025	0.39	+0.3
4,331,590	+		DZA65_RS20025	0.39	-1.1
4,331,590	+		DZA65_RS20025	0.39	-0.6
4,331,590	+		DZA65_RS20025	0.39	-2.8
4,331,590	+		DZA65_RS20025	0.39	-1.0
4,331,590	+		DZA65_RS20025	0.39	+1.4
4,331,591	-		DZA65_RS20025	0.39	+1.0
4,331,591	-		DZA65_RS20025	0.39	-0.3
4,331,638	+		DZA65_RS20025	0.42	+0.7
4,331,638	+		DZA65_RS20025	0.42	+0.2
4,331,638	+		DZA65_RS20025	0.42	-2.7
4,331,638	+		DZA65_RS20025	0.42	+1.6
4,331,638	+		DZA65_RS20025	0.42	+0.4
4,331,638	+		DZA65_RS20025	0.42	-1.5
4,331,638	+		DZA65_RS20025	0.42	-2.0
4,331,638	+		DZA65_RS20025	0.42	-0.6
4,331,638	+		DZA65_RS20025	0.42	+0.5
4,331,638	+		DZA65_RS20025	0.42	+1.0
4,331,638	+		DZA65_RS20025	0.42	-1.0
4,331,638	+		DZA65_RS20025	0.42	+1.0
4,331,638	+		DZA65_RS20025	0.42	-0.4
4,331,639	-		DZA65_RS20025	0.42	+0.6
4,331,639	-		DZA65_RS20025	0.42	+0.3
4,331,639	-		DZA65_RS20025	0.42	-0.4
4,331,639	-		DZA65_RS20025	0.42	+0.7
4,331,639	-		DZA65_RS20025	0.42	-0.3
4,331,639	-		DZA65_RS20025	0.42	+1.1
4,331,794	+		DZA65_RS20025	0.53	+0.4
4,331,794	+		DZA65_RS20025	0.53	+0.2
4,331,794	+		DZA65_RS20025	0.53	-1.9
4,331,794	+		DZA65_RS20025	0.53	-0.5
4,331,795	-		DZA65_RS20025	0.53	-2.2
4,331,795	-		DZA65_RS20025	0.53	-1.8
4,331,819	-		DZA65_RS20025	0.55	+1.0
4,331,819	-		DZA65_RS20025	0.55	+1.6
4,331,819	-		DZA65_RS20025	0.55	+0.7
4,332,093	-				+2.6
4,332,093	-		DZA65_RS20025	0.73	-1.6
4,332,178	+		DZA65_RS20025	0.79	-0.1
4,332,178	+		DZA65_RS20025	0.79	-1.0
4,332,178	+		DZA65_RS20025	0.79	+0.0
4,332,178	+		DZA65_RS20025	0.79	+0.1
4,332,179	-		DZA65_RS20025	0.79	+0.0
4,332,179	-		DZA65_RS20025	0.79	-1.0
4,332,179	-		DZA65_RS20025	0.79	-1.6
4,332,181	+		DZA65_RS20025	0.80	+0.5
4,332,181	+		DZA65_RS20025	0.80	-0.6
4,332,181	+		DZA65_RS20025	0.80	+0.3
4,332,181	+		DZA65_RS20025	0.80	-0.7
4,332,181	+		DZA65_RS20025	0.80	+1.0
4,332,181	+		DZA65_RS20025	0.80	-0.3
4,332,181	+		DZA65_RS20025	0.80	-0.5
4,332,181	+		DZA65_RS20025	0.80	-0.1
4,332,181	+		DZA65_RS20025	0.80	-1.2
4,332,181	+		DZA65_RS20025	0.80	-0.7
4,332,182	-		DZA65_RS20025	0.80	-1.3
4,332,182	-		DZA65_RS20025	0.80	+1.6
4,332,182	-		DZA65_RS20025	0.80	+2.1
4,332,182	-		DZA65_RS20025	0.80	+0.3
4,332,182	-		DZA65_RS20025	0.80	+0.7
4,332,182	-		DZA65_RS20025	0.80	+0.8
4,332,182	-		DZA65_RS20025	0.80	+1.3
4,332,205	+		DZA65_RS20025	0.81	+1.4
4,332,205	+		DZA65_RS20025	0.81	-0.3
4,332,206	-		DZA65_RS20025	0.81	-1.8
4,332,254	+				+0.4
4,332,255	-		DZA65_RS20025	0.85	+0.6
4,332,255	-		DZA65_RS20025	0.85	+2.9
4,332,265	-		DZA65_RS20025	0.85	-0.7
4,332,265	-		DZA65_RS20025	0.85	-0.5
4,332,441	+				+0.4
4,332,441	+				+0.2
4,332,441	+				+0.5
4,332,442	-				-0.6
4,332,442	-				-1.0
4,332,452	+				+0.0
4,332,452	+				-1.3
4,332,453	-				-2.0
4,332,453	-				-0.9
4,332,490	+				-0.3
4,332,491	-				-0.3
4,332,491	-				+0.0
4,332,615	+				-1.6
4,332,616	-				-0.6
4,332,616	-				-0.1
4,332,676	-		DZA65_RS20030	0.16	-0.1
4,332,676	-		DZA65_RS20030	0.16	+0.3
4,332,698	-		DZA65_RS20030	0.18	+1.1
4,332,728	-		DZA65_RS20030	0.22	-0.6
4,332,863	+		DZA65_RS20030	0.37	-0.6
4,332,863	+		DZA65_RS20030	0.37	+1.0
4,332,863	+		DZA65_RS20030	0.37	+0.0
4,332,864	-		DZA65_RS20030	0.37	-1.0
4,332,864	-		DZA65_RS20030	0.37	+0.8
4,332,905	-		DZA65_RS20030	0.42	-1.0
4,332,905	-		DZA65_RS20030	0.42	+0.3
4,332,926	+		DZA65_RS20030	0.44	-0.8
4,332,926	+		DZA65_RS20030	0.44	+0.5
4,332,927	-		DZA65_RS20030	0.44	-0.2
4,332,927	-		DZA65_RS20030	0.44	+1.9
4,332,927	-		DZA65_RS20030	0.44	+0.5
4,332,927	-		DZA65_RS20030	0.44	-1.7
4,332,927	-		DZA65_RS20030	0.44	-0.4
4,332,940	+		DZA65_RS20030	0.46	-0.6
4,332,941	-		DZA65_RS20030	0.46	+0.2
4,332,941	-		DZA65_RS20030	0.46	-1.3
4,332,941	-		DZA65_RS20030	0.46	-1.8
4,332,941	-				+1.0
4,332,941	-		DZA65_RS20030	0.46	+1.0
4,332,973	+		DZA65_RS20030	0.49	-0.2
4,332,973	+		DZA65_RS20030	0.49	-0.5
4,332,974	-		DZA65_RS20030	0.50	-0.2
4,332,974	-		DZA65_RS20030	0.50	+0.2
4,332,974	-		DZA65_RS20030	0.50	+0.5
4,332,974	-		DZA65_RS20030	0.50	+0.1
4,332,974	-		DZA65_RS20030	0.50	-1.3
4,333,023	+		DZA65_RS20030	0.55	-0.9
4,333,024	-		DZA65_RS20030	0.55	-0.6
4,333,045	+		DZA65_RS20030	0.58	+0.6
4,333,045	+		DZA65_RS20030	0.58	+0.1
4,333,045	+		DZA65_RS20030	0.58	+0.4
4,333,046	-		DZA65_RS20030	0.58	+0.2
4,333,046	-		DZA65_RS20030	0.58	+1.9
4,333,046	-		DZA65_RS20030	0.58	+1.2
4,333,046	-		DZA65_RS20030	0.58	-0.9
4,333,072	+		DZA65_RS20030	0.61	+1.0
4,333,072	+		DZA65_RS20030	0.61	+1.2
4,333,072	+		DZA65_RS20030	0.61	+0.3
4,333,373	+				+0.2
4,333,393	+				+1.0
4,333,393	+				+1.0
4,333,393	+				-0.2
4,333,393	+				-0.1
4,333,393	+				+0.6
4,333,393	+				+0.2
4,333,393	+				+1.0
4,333,393	+				-1.6
4,333,394	-				-1.3
4,333,394	-				-0.5
4,333,394	-				+0.4
4,333,394	-				+0.0
4,333,394	-				+1.7
4,333,394	-				+3.4
4,333,394	-				+2.3
4,333,394	-				+2.3
4,333,394	-				+0.2
4,333,394	-				-1.2
4,333,480	+				-1.6
4,333,480	+				-0.1
4,333,480	+				-2.0
4,333,480	+				+0.5
4,333,480	+				+1.6
4,333,481	-				-0.0
4,333,681	+				+1.3
4,333,682	-				-1.7
4,333,686	+				+1.1
4,333,686	+				+0.1
4,333,686	+				+1.6
4,333,686	+				-0.1
4,333,687	-				-0.4
4,333,687	-				+1.7
4,333,687	-				-0.1
4,333,687	-				-0.2
4,333,687	-				-1.3
4,333,697	-				+2.4
4,333,715	+				+0.4
4,333,797	+				-0.9
4,333,815	-				-0.6
4,333,832	-				-0.5
4,333,877	+				+0.2
4,333,943	-		DZA65_RS20035	0.12	+7.9
4,333,955	+				-0.6
4,333,956	-		DZA65_RS20035	0.14	-0.4
4,333,957	+		DZA65_RS20035	0.14	-0.6
4,333,958	-		DZA65_RS20035	0.14	-1.1
4,334,037	+		DZA65_RS20035	0.24	-1.2
4,334,038	-		DZA65_RS20035	0.25	-0.2
4,334,064	-		DZA65_RS20035	0.28	-1.0
4,334,084	+		DZA65_RS20035	0.31	+1.0
4,334,084	+				+2.0
4,334,085	-		DZA65_RS20035	0.31	+0.4
4,334,101	+		DZA65_RS20035	0.33	+1.0
4,334,102	-		DZA65_RS20035	0.33	-0.5
4,334,146	+		DZA65_RS20035	0.39	-0.3
4,334,147	-		DZA65_RS20035	0.39	-0.2
4,334,147	-		DZA65_RS20035	0.39	-0.3
4,334,170	+		DZA65_RS20035	0.42	-1.0
4,334,170	+		DZA65_RS20035	0.42	-0.6
4,334,170	+		DZA65_RS20035	0.42	-1.5
4,334,170	+		DZA65_RS20035	0.42	-0.4
4,334,171	-		DZA65_RS20035	0.42	-0.2
4,334,171	-		DZA65_RS20035	0.42	-1.3
4,334,171	-				+3.8
4,334,171	-		DZA65_RS20035	0.42	+0.7
4,334,171	-		DZA65_RS20035	0.42	+0.5
4,334,171	-		DZA65_RS20035	0.42	+0.5
4,334,171	-		DZA65_RS20035	0.42	-1.6
4,334,183	-		DZA65_RS20035	0.44	+0.9
4,334,201	+		DZA65_RS20035	0.46	+0.3
4,334,202	-		DZA65_RS20035	0.47	-0.8
4,334,237	+		DZA65_RS20035	0.51	-1.3
4,334,251	+		DZA65_RS20035	0.53	-1.0
4,334,251	+		DZA65_RS20035	0.53	+0.3
4,334,252	-		DZA65_RS20035	0.53	-0.8
4,334,252	-		DZA65_RS20035	0.53	+0.1
4,334,266	+		DZA65_RS20035	0.55	-1.5
4,334,267	-		DZA65_RS20035	0.55	-0.3
4,334,267	-		DZA65_RS20035	0.55	+0.6
4,334,353	+		DZA65_RS20035	0.67	-0.2
4,334,353	+		DZA65_RS20035	0.67	-0.1
4,334,353	+		DZA65_RS20035	0.67	+0.1
4,334,354	-		DZA65_RS20035	0.67	+2.2
4,334,354	-		DZA65_RS20035	0.67	+1.6
4,334,354	-		DZA65_RS20035	0.67	-1.3
4,334,354	-		DZA65_RS20035	0.67	+1.0