Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18705

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,027,273	+				-0.1
4,027,273	+				-1.1
4,027,279	+				+0.1
4,027,279	+				-0.5
4,027,280	-				-0.6
4,027,280	-				-0.1
4,027,280	-				-0.4
4,027,280	-				+0.6
4,027,280	-				-0.8
4,027,294	+				-0.1
4,027,294	+				-0.1
4,027,295	-				+0.1
4,027,327	-				-0.7
4,027,366	+				-0.2
4,027,366	+				-0.3
4,027,366	+				-1.3
4,027,366	+				-2.1
4,027,366	+				-0.1
4,027,366	+				+0.6
4,027,366	+				-0.7
4,027,367	-				-2.2
4,027,367	-				+0.5
4,027,367	-				-0.6
4,027,367	-				-0.6
4,027,367	-				+0.1
4,027,393	+		DZA65_RS18700	0.11	-0.5
4,027,393	+		DZA65_RS18700	0.11	-0.2
4,027,462	+		DZA65_RS18700	0.18	+1.6
4,027,462	+		DZA65_RS18700	0.18	-0.1
4,027,462	+		DZA65_RS18700	0.18	+0.3
4,027,462	+		DZA65_RS18700	0.18	-0.4
4,027,463	-		DZA65_RS18700	0.18	+0.7
4,027,463	-		DZA65_RS18700	0.18	-3.1
4,027,463	-		DZA65_RS18700	0.18	-1.1
4,027,463	-		DZA65_RS18700	0.18	-0.7
4,027,463	-		DZA65_RS18700	0.18	-0.7
4,027,528	+		DZA65_RS18700	0.25	+0.8
4,027,528	+		DZA65_RS18700	0.25	+0.1
4,027,528	+		DZA65_RS18700	0.25	+0.9
4,027,528	+		DZA65_RS18700	0.25	-0.5
4,027,528	+		DZA65_RS18700	0.25	+0.5
4,027,528	+		DZA65_RS18700	0.25	-2.6
4,027,528	+		DZA65_RS18700	0.25	+0.5
4,027,528	+		DZA65_RS18700	0.25	+1.3
4,027,528	+		DZA65_RS18700	0.25	+1.2
4,027,528	+		DZA65_RS18700	0.25	+1.3
4,027,529	-		DZA65_RS18700	0.25	+0.9
4,027,529	-		DZA65_RS18700	0.25	+0.3
4,027,529	-		DZA65_RS18700	0.25	-1.0
4,027,529	-		DZA65_RS18700	0.25	+1.6
4,027,529	-		DZA65_RS18700	0.25	-1.0
4,027,529	-		DZA65_RS18700	0.25	+0.5
4,027,529	-		DZA65_RS18700	0.25	+1.2
4,027,529	-		DZA65_RS18700	0.25	-0.8
4,027,529	-		DZA65_RS18700	0.25	-0.5
4,027,529	-		DZA65_RS18700	0.25	+0.7
4,027,529	-		DZA65_RS18700	0.25	-1.0
4,027,529	-		DZA65_RS18700	0.25	+0.2
4,027,529	-		DZA65_RS18700	0.25	-1.3
4,027,529	-		DZA65_RS18700	0.25	+0.5
4,027,574	-		DZA65_RS18700	0.30	+0.1
4,027,639	+		DZA65_RS18700	0.37	-0.9
4,027,640	-		DZA65_RS18700	0.37	-0.1
4,027,640	-		DZA65_RS18700	0.37	-1.1
4,027,640	-		DZA65_RS18700	0.37	+0.5
4,027,740	+		DZA65_RS18700	0.47	-1.9
4,027,741	-		DZA65_RS18700	0.47	-1.6
4,027,819	-		DZA65_RS18700	0.55	+0.3
4,028,100	+		DZA65_RS18700	0.85	+2.5
4,028,101	-		DZA65_RS18700	0.85	-1.8
4,028,176	+				-0.6
4,028,176	+				-0.6
4,028,176	+				-1.0
4,028,177	-				-1.2
4,028,177	-				-0.7
4,028,177	-				-0.3
4,028,217	-				+1.6
4,028,217	-				+0.3
4,028,217	-				-1.9
4,028,217	-				-0.1
4,028,290	+				+1.6
4,028,290	+				+0.5
4,028,290	+				+0.1
4,028,291	-				-0.7
4,028,306	-				-0.7
4,028,306	-				-2.3
4,028,367	-				-0.9
4,028,482	+		DZA65_RS18705	0.18	-0.3
4,028,482	+		DZA65_RS18705	0.18	-1.1
4,028,483	-		DZA65_RS18705	0.18	-1.0
4,028,483	-		DZA65_RS18705	0.18	-0.5
4,028,483	-		DZA65_RS18705	0.18	-0.5
4,028,483	-		DZA65_RS18705	0.18	-0.4
4,028,483	-		DZA65_RS18705	0.18	+1.3
4,028,483	-		DZA65_RS18705	0.18	-0.4
4,028,483	-		DZA65_RS18705	0.18	+2.5
4,028,483	-		DZA65_RS18705	0.18	-0.0
4,028,542	-		DZA65_RS18705	0.23	+0.9
4,028,542	-		DZA65_RS18705	0.23	-0.2
4,028,542	-		DZA65_RS18705	0.23	-2.2
4,028,574	+		DZA65_RS18705	0.25	-1.4
4,028,574	+		DZA65_RS18705	0.25	-2.2
4,028,645	-		DZA65_RS18705	0.30	+1.9
4,028,661	+		DZA65_RS18705	0.31	-0.7
4,028,661	+		DZA65_RS18705	0.31	-1.1
4,028,661	+		DZA65_RS18705	0.31	+0.4
4,028,661	+		DZA65_RS18705	0.31	-0.0
4,028,662	-		DZA65_RS18705	0.32	+0.1
4,028,662	-		DZA65_RS18705	0.32	+0.2
4,028,763	+		DZA65_RS18705	0.39	-1.0
4,028,763	+		DZA65_RS18705	0.39	+1.0
4,028,763	+		DZA65_RS18705	0.39	+0.5
4,028,763	+		DZA65_RS18705	0.39	+0.1
4,028,763	+		DZA65_RS18705	0.39	-0.9
4,028,763	+		DZA65_RS18705	0.39	+0.4
4,028,764	-		DZA65_RS18705	0.39	-0.8
4,028,764	-		DZA65_RS18705	0.39	-1.7
4,028,764	-		DZA65_RS18705	0.39	-0.5
4,028,764	-		DZA65_RS18705	0.39	-0.1
4,028,764	-		DZA65_RS18705	0.39	-2.4
4,028,764	-		DZA65_RS18705	0.39	+0.9
4,028,800	+		DZA65_RS18705	0.42	+0.3
4,028,801	-		DZA65_RS18705	0.42	+0.6
4,028,824	+		DZA65_RS18705	0.44	-0.1
4,028,840	-		DZA65_RS18705	0.45	-1.8
4,028,840	-		DZA65_RS18705	0.45	-0.7
4,028,840	-		DZA65_RS18705	0.45	+1.9
4,028,840	-		DZA65_RS18705	0.45	-0.7
4,028,847	+		DZA65_RS18705	0.45	-0.4
4,028,934	-		DZA65_RS18705	0.52	+0.6
4,028,934	-		DZA65_RS18705	0.52	-2.1
4,028,970	+		DZA65_RS18705	0.55	-1.3
4,028,970	+		DZA65_RS18705	0.55	-0.2
4,028,970	+		DZA65_RS18705	0.55	+0.5
4,028,970	+		DZA65_RS18705	0.55	+0.2
4,028,971	-		DZA65_RS18705	0.55	+0.6
4,028,971	-		DZA65_RS18705	0.55	-1.3
4,028,981	+		DZA65_RS18705	0.55	+0.8
4,028,981	+		DZA65_RS18705	0.55	-0.1
4,028,982	-		DZA65_RS18705	0.55	+0.2
4,028,982	-		DZA65_RS18705	0.55	+0.1
4,028,991	+		DZA65_RS18705	0.56	+0.2
4,028,991	+		DZA65_RS18705	0.56	-0.5
4,028,991	+		DZA65_RS18705	0.56	-0.4
4,028,992	-		DZA65_RS18705	0.56	-1.1
4,028,992	-		DZA65_RS18705	0.56	+1.7
4,028,992	-		DZA65_RS18705	0.56	+1.2
4,028,992	-		DZA65_RS18705	0.56	-0.0
4,028,992	-		DZA65_RS18705	0.56	+1.1
4,029,015	+		DZA65_RS18705	0.58	+0.4
4,029,015	+		DZA65_RS18705	0.58	-0.4
4,029,015	+		DZA65_RS18705	0.58	-0.8
4,029,015	+		DZA65_RS18705	0.58	+0.7
4,029,015	+		DZA65_RS18705	0.58	+0.2
4,029,015	+		DZA65_RS18705	0.58	+0.3
4,029,015	+		DZA65_RS18705	0.58	+0.3
4,029,016	-		DZA65_RS18705	0.58	+2.2
4,029,016	-		DZA65_RS18705	0.58	-0.4
4,029,016	-		DZA65_RS18705	0.58	-0.9
4,029,025	+		DZA65_RS18705	0.59	-0.6
4,029,026	-		DZA65_RS18705	0.59	+0.9
4,029,146	+		DZA65_RS18705	0.68	-3.0
4,029,146	+		DZA65_RS18705	0.68	+0.1
4,029,147	-		DZA65_RS18705	0.68	+0.6
4,029,230	+		DZA65_RS18705	0.74	+1.3
4,029,231	-		DZA65_RS18705	0.74	-0.2
4,029,231	-		DZA65_RS18705	0.74	+0.9
4,029,352	+		DZA65_RS18705	0.83	-0.1
4,029,402	+		DZA65_RS18705	0.87	-0.6
4,029,402	+		DZA65_RS18705	0.87	+1.3
4,029,402	+		DZA65_RS18705	0.87	+0.8
4,029,402	+		DZA65_RS18705	0.87	+0.0
4,029,403	-		DZA65_RS18705	0.87	+1.1
4,029,413	+		DZA65_RS18705	0.88	+0.2
4,029,413	+		DZA65_RS18705	0.88	+1.1
4,029,413	+		DZA65_RS18705	0.88	-1.1
4,029,413	+		DZA65_RS18705	0.88	+1.2
4,029,413	+		DZA65_RS18705	0.88	-0.2
4,029,413	+		DZA65_RS18705	0.88	-0.3
4,029,414	-		DZA65_RS18705	0.88	+0.2
4,029,414	-		DZA65_RS18705	0.88	-1.0
4,029,414	-		DZA65_RS18705	0.88	+0.6
4,029,414	-		DZA65_RS18705	0.88	+0.3
4,029,488	-				-0.5
4,029,499	+				-1.9
4,029,538	+				-2.1
4,029,540	+				+0.4
4,029,540	+				-0.1
4,029,540	+				+0.2
4,029,540	+				-0.4
4,029,541	-				+1.2
4,029,541	-				+0.1
4,029,541	-				+2.2
4,029,541	-				-0.1
4,029,541	-				+0.3
4,029,541	-				+1.5
4,029,541	-				-0.1
4,029,541	-				+1.8
4,029,541	-				-0.7
4,029,560	+				-0.5
4,029,561	-				+1.7
4,029,561	-				+0.7
4,029,617	-				-0.5
4,029,617	-				+2.7
4,029,645	+				-0.5
4,029,728	+				+1.3
4,029,729	-				-0.7
4,029,740	+				-0.0
4,029,740	+				-0.5
4,029,740	+				+0.7
4,029,740	+				+0.1
4,029,740	+				+0.3
4,029,741	-				+0.4
4,029,798	+				+0.9
4,029,843	+				+1.3
4,029,843	+				-0.9
4,029,843	+				+0.8
4,029,843	+				-0.7
4,029,843	+				-0.6
4,029,843	+				-0.7
4,029,844	-				+0.5
4,029,844	-				-2.1
4,029,844	-				+1.0
4,030,080	+		DZA65_RS18710	0.15	+0.5
4,030,106	+		DZA65_RS18710	0.16	-0.6
4,030,228	+		DZA65_RS18710	0.19	-0.7
4,030,228	+		DZA65_RS18710	0.19	-0.4
4,030,228	+		DZA65_RS18710	0.19	+0.6
4,030,229	-		DZA65_RS18710	0.19	-1.1
4,030,235	+		DZA65_RS18710	0.20	+0.5
4,030,236	-		DZA65_RS18710	0.20	-0.7
4,030,236	-		DZA65_RS18710	0.20	-1.3
4,030,243	-				-1.1
4,030,243	-		DZA65_RS18710	0.20	-0.4
4,030,243	-		DZA65_RS18710	0.20	+0.3
4,030,243	-		DZA65_RS18710	0.20	+0.4
4,030,243	-		DZA65_RS18710	0.20	-1.0
4,030,346	+		DZA65_RS18710	0.23	+1.3
4,030,346	+		DZA65_RS18710	0.23	-0.1
4,030,346	+		DZA65_RS18710	0.23	+0.9
4,030,346	+		DZA65_RS18710	0.23	-0.4
4,030,347	-		DZA65_RS18710	0.23	-0.2
4,030,347	-		DZA65_RS18710	0.23	+2.2
4,030,470	+		DZA65_RS18710	0.27	-2.6
4,030,470	+		DZA65_RS18710	0.27	+0.9
4,030,470	+		DZA65_RS18710	0.27	-0.1
4,030,471	-		DZA65_RS18710	0.27	-0.7
4,030,471	-		DZA65_RS18710	0.27	-0.8
4,030,538	+		DZA65_RS18710	0.29	-1.4
4,030,539	-		DZA65_RS18710	0.29	+0.1
4,030,547	+		DZA65_RS18710	0.29	+0.2
4,030,547	+		DZA65_RS18710	0.29	+1.2
4,030,548	-		DZA65_RS18710	0.29	-2.0
4,030,548	-				+0.3
4,030,548	-		DZA65_RS18710	0.29	+0.8
4,030,559	+		DZA65_RS18710	0.29	+0.0