Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17870

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,844,540	+		DZA65_RS17865	0.49	-0.4
3,844,540	+		DZA65_RS17865	0.49	-0.5
3,844,540	+		DZA65_RS17865	0.49	-1.7
3,844,540	+		DZA65_RS17865	0.49	-0.3
3,844,541	-		DZA65_RS17865	0.49	+1.1
3,844,587	+		DZA65_RS17865	0.52	-0.1
3,844,588	-		DZA65_RS17865	0.52	-0.1
3,844,588	-		DZA65_RS17865	0.52	-0.6
3,844,628	+		DZA65_RS17865	0.55	+0.1
3,844,629	-		DZA65_RS17865	0.55	-0.5
3,844,670	+		DZA65_RS17865	0.57	-0.5
3,844,670	+		DZA65_RS17865	0.57	+1.3
3,844,670	+		DZA65_RS17865	0.57	-0.5
3,844,670	+		DZA65_RS17865	0.57	+0.4
3,844,671	-		DZA65_RS17865	0.58	+0.7
3,844,949	-		DZA65_RS17865	0.76	+0.5
3,844,949	-		DZA65_RS17865	0.76	-0.2
3,845,012	-		DZA65_RS17865	0.80	-0.1
3,845,012	-		DZA65_RS17865	0.80	-1.5
3,845,012	-		DZA65_RS17865	0.80	+0.3
3,845,175	-				+0.0
3,845,175	-				-1.5
3,845,175	-				+0.5
3,845,221	+				-0.5
3,845,222	-				+0.6
3,845,228	-				+0.2
3,845,271	+				+1.2
3,845,271	+				-0.8
3,845,271	+				+0.8
3,845,271	+				-1.9
3,845,271	+				+0.6
3,845,271	+				-0.5
3,845,300	-				+0.8
3,845,514	+				-0.8
3,845,514	+				-0.0
3,845,514	+				-0.5
3,845,514	+				+1.1
3,845,514	+				+0.2
3,845,514	+				+0.1
3,845,514	+				+0.8
3,845,514	+				-0.8
3,845,514	+				-0.8
3,845,514	+				-0.8
3,845,515	-				+0.3
3,845,515	-				+0.2
3,845,515	-				-0.3
3,845,515	-				-1.7
3,845,515	-				-0.7
3,845,515	-				-0.0
3,845,515	-				-0.4
3,845,515	-				-1.0
3,845,515	-				+0.3
3,845,515	-				+0.4
3,845,515	-				-0.0
3,845,515	-				+0.8
3,845,515	-				-0.3
3,845,515	-				+0.2
3,845,515	-				-0.2
3,845,515	-				-0.7
3,845,515	-				+1.0
3,845,515	-				+0.8
3,845,515	-				-0.8
3,845,515	-				-1.5
3,845,515	-				+0.9
3,845,515	-				+1.1
3,845,516	+				+0.2
3,845,554	+				-0.3
3,845,554	+				-0.2
3,845,554	+				-1.2
3,845,554	+				+1.8
3,845,554	+				+0.3
3,845,554	+				-0.9
3,845,554	+				+0.1
3,845,554	+				-0.4
3,845,554	+				+0.7
3,845,555	-				+2.1
3,845,555	-				+0.2
3,845,555	-				+1.3
3,845,555	-				+0.5
3,845,555	-				-0.2
3,845,555	-				-0.2
3,845,555	-				-1.1
3,845,555	-				-1.5
3,845,555	-				+1.8
3,845,556	+				-0.2
3,845,556	+				-0.4
3,845,556	+				-1.7
3,845,557	-				+1.0
3,845,625	-				+3.4
3,845,625	-				+0.5
3,845,645	+				-0.7
3,845,645	+				-0.8
3,845,646	-				+0.4
3,845,671	+				-1.5
3,845,671	+				-0.0
3,845,671	+				+0.2
3,845,671	+				+2.0
3,845,672	-				-1.7
3,845,672	-				+0.2
3,845,693	+				-1.2
3,845,694	-				-0.8
3,845,714	+				+0.2
3,845,714	+				+0.6
3,845,714	+				+2.4
3,845,715	-				-0.4
3,845,823	+		DZA65_RS17870	0.16	+2.7
3,845,823	+		DZA65_RS17870	0.16	+0.4
3,845,823	+		DZA65_RS17870	0.16	-0.4
3,845,823	+		DZA65_RS17870	0.16	-0.0
3,845,824	-		DZA65_RS17870	0.16	-0.2
3,845,824	-		DZA65_RS17870	0.16	-0.8
3,845,824	-		DZA65_RS17870	0.16	-1.2
3,845,827	+		DZA65_RS17870	0.16	-1.7
3,845,827	+		DZA65_RS17870	0.16	+0.3
3,845,827	+		DZA65_RS17870	0.16	-0.9
3,845,828	-		DZA65_RS17870	0.16	-0.5
3,845,828	-		DZA65_RS17870	0.16	+0.3
3,845,828	-		DZA65_RS17870	0.16	+0.2
3,845,828	-		DZA65_RS17870	0.16	-0.5
3,845,968	-		DZA65_RS17870	0.24	-0.7
3,845,978	-		DZA65_RS17870	0.25	+0.2
3,846,087	+		DZA65_RS17870	0.31	+0.6
3,846,088	-		DZA65_RS17870	0.31	-0.3
3,846,247	+		DZA65_RS17870	0.39	+0.5
3,846,270	+		DZA65_RS17870	0.41	-1.0
3,846,271	+		DZA65_RS17870	0.41	-0.4
3,846,443	+		DZA65_RS17870	0.50	-0.5
3,846,443	+		DZA65_RS17870	0.50	-2.5
3,846,443	+		DZA65_RS17870	0.50	-1.3
3,846,443	+		DZA65_RS17870	0.50	+0.2
3,846,444	-		DZA65_RS17870	0.50	-0.5
3,846,444	-		DZA65_RS17870	0.50	-0.6
3,846,444	-		DZA65_RS17870	0.50	+0.2
3,846,444	-		DZA65_RS17870	0.50	+0.3
3,846,444	-		DZA65_RS17870	0.50	+0.1
3,846,445	+		DZA65_RS17870	0.50	-0.5
3,846,445	+		DZA65_RS17870	0.50	+0.8
3,846,445	+		DZA65_RS17870	0.50	+0.2
3,846,445	+		DZA65_RS17870	0.50	-1.3
3,846,445	+		DZA65_RS17870	0.50	+0.1
3,846,445	+		DZA65_RS17870	0.50	+0.1
3,846,445	+				+2.8
3,846,445	+		DZA65_RS17870	0.50	-0.2
3,846,446	-		DZA65_RS17870	0.50	+0.1
3,846,446	-		DZA65_RS17870	0.50	+0.1
3,846,446	-		DZA65_RS17870	0.50	-0.2
3,846,446	-		DZA65_RS17870	0.50	-1.2
3,846,446	-		DZA65_RS17870	0.50	+0.2
3,846,446	-		DZA65_RS17870	0.50	+0.5
3,846,446	-		DZA65_RS17870	0.50	-1.0
3,846,446	-		DZA65_RS17870	0.50	+0.9
3,846,446	-		DZA65_RS17870	0.50	+1.0
3,846,446	-		DZA65_RS17870	0.50	-0.1
3,846,446	-		DZA65_RS17870	0.50	-0.3
3,846,446	-		DZA65_RS17870	0.50	+0.3
3,846,492	-		DZA65_RS17870	0.53	-0.0
3,846,492	-		DZA65_RS17870	0.53	-1.5
3,846,556	+		DZA65_RS17870	0.57	-1.2
3,846,587	-		DZA65_RS17870	0.58	+0.5
3,846,587	-		DZA65_RS17870	0.58	+0.6
3,846,672	+		DZA65_RS17870	0.63	-1.8
3,846,673	-		DZA65_RS17870	0.63	+0.4
3,846,673	-		DZA65_RS17870	0.63	-0.5
3,846,673	-		DZA65_RS17870	0.63	+0.1
3,846,706	+		DZA65_RS17870	0.65	+0.2
3,846,706	+		DZA65_RS17870	0.65	-0.0
3,846,707	-		DZA65_RS17870	0.65	+0.4
3,846,707	-		DZA65_RS17870	0.65	-0.7
3,846,727	+		DZA65_RS17870	0.66	-0.6
3,846,728	-		DZA65_RS17870	0.66	-0.7
3,846,965	+		DZA65_RS17870	0.79	-0.2
3,846,968	+		DZA65_RS17870	0.79	-0.5
3,846,968	+		DZA65_RS17870	0.79	-0.4
3,846,968	+		DZA65_RS17870	0.79	-1.3
3,846,969	-		DZA65_RS17870	0.79	-0.0
3,846,969	-		DZA65_RS17870	0.79	-0.5
3,846,980	+		DZA65_RS17870	0.80	+0.9
3,846,980	+		DZA65_RS17870	0.80	-0.2
3,846,988	-		DZA65_RS17870	0.81	+0.3
3,847,066	+		DZA65_RS17870	0.85	-1.0
3,847,067	-		DZA65_RS17870	0.85	-1.5
3,847,067	-		DZA65_RS17870	0.85	+0.4
3,847,316	+				-1.5
3,847,316	+				+0.4
3,847,337	-				-0.2
3,847,469	+				-0.1
3,847,470	-				+1.4
3,847,472	+				+0.4
3,847,485	+				-2.4
3,847,921	+				-1.2
3,848,022	-				-1.0
3,848,074	+				+1.1
3,848,200	+		DZA65_RS17875	0.18	+0.8
3,848,261	+		DZA65_RS17875	0.23	-0.9
3,848,262	-		DZA65_RS17875	0.23	+0.2
3,848,304	-		DZA65_RS17875	0.26	-0.8
3,848,304	-		DZA65_RS17875	0.26	-1.5