Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17855

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,841,242	+				-0.4
3,841,242	+				-0.8
3,841,242	+				-2.2
3,841,242	+				+2.5
3,841,242	+				-2.0
3,841,242	+				+0.4
3,841,243	-				-1.5
3,841,243	-				+0.1
3,841,243	-				-0.2
3,841,243	-				-0.2
3,841,309	+		DZA65_RS17850	0.16	+0.8
3,841,371	+		DZA65_RS17850	0.23	+0.4
3,841,371	+		DZA65_RS17850	0.23	+0.2
3,841,371	+		DZA65_RS17850	0.23	-1.2
3,841,372	-		DZA65_RS17850	0.23	-0.2
3,841,441	+		DZA65_RS17850	0.30	+0.4
3,841,441	+		DZA65_RS17850	0.30	+0.5
3,841,441	+		DZA65_RS17850	0.30	+0.6
3,841,441	+		DZA65_RS17850	0.30	+0.2
3,841,441	+		DZA65_RS17850	0.30	+1.1
3,841,441	+		DZA65_RS17850	0.30	-0.5
3,841,441	+		DZA65_RS17850	0.30	+0.8
3,841,442	-		DZA65_RS17850	0.30	+0.5
3,841,442	-		DZA65_RS17850	0.30	-0.2
3,841,442	-		DZA65_RS17850	0.30	-0.0
3,841,442	-		DZA65_RS17850	0.30	-1.5
3,841,444	-				+1.8
3,841,444	-				-0.2
3,841,444	-		DZA65_RS17850	0.30	+0.2
3,841,518	+		DZA65_RS17850	0.38	-1.2
3,841,518	+		DZA65_RS17850	0.38	-0.5
3,841,518	+		DZA65_RS17850	0.38	+0.6
3,841,518	+		DZA65_RS17850	0.38	+0.8
3,841,519	-		DZA65_RS17850	0.38	+1.7
3,841,521	+		DZA65_RS17850	0.38	+0.2
3,841,521	+		DZA65_RS17850	0.38	-1.7
3,841,521	+		DZA65_RS17850	0.38	+1.2
3,841,522	-		DZA65_RS17850	0.39	+1.3
3,841,522	-		DZA65_RS17850	0.39	-0.4
3,841,522	-		DZA65_RS17850	0.39	-0.3
3,841,533	+		DZA65_RS17850	0.40	+0.1
3,841,593	+		DZA65_RS17850	0.46	+0.6
3,841,593	+		DZA65_RS17850	0.46	-0.8
3,841,593	+		DZA65_RS17850	0.46	-0.5
3,841,594	-		DZA65_RS17850	0.46	-1.1
3,841,594	-		DZA65_RS17850	0.46	+0.5
3,841,594	-				+2.4
3,841,631	+		DZA65_RS17850	0.50	-0.2
3,841,631	+		DZA65_RS17850	0.50	+1.4
3,841,631	+		DZA65_RS17850	0.50	-0.1
3,841,632	-		DZA65_RS17850	0.50	-1.0
3,841,632	-		DZA65_RS17850	0.50	+1.0
3,841,632	-		DZA65_RS17850	0.50	-0.8
3,841,632	-		DZA65_RS17850	0.50	-1.3
3,841,632	-		DZA65_RS17850	0.50	+0.1
3,841,632	-		DZA65_RS17850	0.50	-1.2
3,841,632	-		DZA65_RS17850	0.50	-0.2
3,841,632	-		DZA65_RS17850	0.50	-1.4
3,841,637	+		DZA65_RS17850	0.51	-0.6
3,841,637	+		DZA65_RS17850	0.51	-0.8
3,841,678	+		DZA65_RS17850	0.55	-1.0
3,841,678	+		DZA65_RS17850	0.55	-0.2
3,841,678	+		DZA65_RS17850	0.55	-2.0
3,841,679	-		DZA65_RS17850	0.55	-0.7
3,841,722	+		DZA65_RS17850	0.60	+0.4
3,841,722	+		DZA65_RS17850	0.60	+1.4
3,841,723	-		DZA65_RS17850	0.60	-0.2
3,841,723	-		DZA65_RS17850	0.60	+0.7
3,841,723	-		DZA65_RS17850	0.60	+0.5
3,841,828	+		DZA65_RS17850	0.71	-0.3
3,841,829	-				-0.8
3,841,829	-		DZA65_RS17850	0.71	-0.8
3,841,829	-		DZA65_RS17850	0.71	+1.1
3,841,829	-		DZA65_RS17850	0.71	-0.9
3,841,829	-		DZA65_RS17850	0.71	-0.2
3,841,854	+		DZA65_RS17850	0.74	+0.2
3,841,855	-		DZA65_RS17850	0.74	+0.3
3,841,860	+		DZA65_RS17850	0.74	-0.2
3,841,861	-		DZA65_RS17850	0.74	+0.4
3,841,861	-		DZA65_RS17850	0.74	+0.1
3,841,861	-		DZA65_RS17850	0.74	-1.2
3,841,879	+		DZA65_RS17850	0.76	-2.9
3,841,879	+		DZA65_RS17850	0.76	-1.1
3,841,879	+		DZA65_RS17850	0.76	+0.6
3,841,879	+		DZA65_RS17850	0.76	-0.0
3,841,879	+		DZA65_RS17850	0.76	+0.5
3,841,879	+		DZA65_RS17850	0.76	+0.4
3,841,879	+		DZA65_RS17850	0.76	-2.0
3,841,879	+		DZA65_RS17850	0.76	+0.2
3,841,879	+		DZA65_RS17850	0.76	-0.1
3,841,879	+		DZA65_RS17850	0.76	-0.3
3,841,880	-		DZA65_RS17850	0.76	-0.4
3,841,880	-		DZA65_RS17850	0.76	+1.2
3,841,880	-		DZA65_RS17850	0.76	+0.8
3,841,880	-		DZA65_RS17850	0.76	+0.0
3,841,977	+		DZA65_RS17850	0.86	-0.8
3,841,977	+		DZA65_RS17850	0.86	+0.8
3,841,978	-		DZA65_RS17850	0.87	-0.9
3,842,046	+				-0.4
3,842,046	+				-0.2
3,842,046	+				-0.5
3,842,046	+				+1.1
3,842,047	-				+1.8
3,842,047	-				-0.4
3,842,051	+				-0.9
3,842,051	+				+0.6
3,842,052	-				-0.1
3,842,052	-				-1.2
3,842,052	-				-0.8
3,842,068	-				-0.2
3,842,068	-				+0.2
3,842,068	-				-3.0
3,842,117	+				-2.1
3,842,118	-				+1.8
3,842,147	+				-0.3
3,842,147	+				-1.5
3,842,147	+				+0.5
3,842,147	+				-0.9
3,842,148	-				+0.6
3,842,148	-				-1.2
3,842,148	-				+0.8
3,842,148	-				-0.6
3,842,148	-				+0.2
3,842,160	-				-0.8
3,842,374	+		DZA65_RS17855	0.27	+0.4
3,842,374	+		DZA65_RS17855	0.27	+0.8
3,842,375	-		DZA65_RS17855	0.27	+0.8
3,842,405	+		DZA65_RS17855	0.31	+0.8
3,842,406	-		DZA65_RS17855	0.31	-1.2
3,842,406	-		DZA65_RS17855	0.31	-1.5
3,842,406	-		DZA65_RS17855	0.31	-0.5
3,842,406	-		DZA65_RS17855	0.31	+1.8
3,842,406	-		DZA65_RS17855	0.31	+1.3
3,842,406	-		DZA65_RS17855	0.31	-0.7
3,842,407	+		DZA65_RS17855	0.32	-0.8
3,842,407	+		DZA65_RS17855	0.32	-0.7
3,842,407	+		DZA65_RS17855	0.32	-0.5
3,842,407	+		DZA65_RS17855	0.32	-3.0
3,842,408	-		DZA65_RS17855	0.32	-2.0
3,842,408	-		DZA65_RS17855	0.32	-0.7
3,842,408	-		DZA65_RS17855	0.32	-0.6
3,842,408	-		DZA65_RS17855	0.32	+0.3
3,842,408	-		DZA65_RS17855	0.32	+0.8
3,842,408	-		DZA65_RS17855	0.32	-0.8
3,842,408	-		DZA65_RS17855	0.32	+0.8
3,842,408	-		DZA65_RS17855	0.32	-0.3
3,842,408	-		DZA65_RS17855	0.32	+0.2
3,842,408	-		DZA65_RS17855	0.32	-0.6
3,842,408	-		DZA65_RS17855	0.32	-1.2
3,842,408	-		DZA65_RS17855	0.32	+0.1
3,842,408	-		DZA65_RS17855	0.32	+0.8
3,842,408	-		DZA65_RS17855	0.32	-1.8
3,842,408	-		DZA65_RS17855	0.32	-0.4
3,842,425	+		DZA65_RS17855	0.34	-2.2
3,842,425	+		DZA65_RS17855	0.34	-0.2
3,842,425	+		DZA65_RS17855	0.34	-0.2
3,842,425	+		DZA65_RS17855	0.34	-2.1
3,842,425	+		DZA65_RS17855	0.34	-0.5
3,842,425	+		DZA65_RS17855	0.34	+1.4
3,842,425	+		DZA65_RS17855	0.34	-1.6
3,842,425	+		DZA65_RS17855	0.34	+0.4
3,842,425	+		DZA65_RS17855	0.34	-0.2
3,842,425	+		DZA65_RS17855	0.34	-0.7
3,842,425	+		DZA65_RS17855	0.34	-0.4
3,842,425	+		DZA65_RS17855	0.34	-0.2
3,842,425	+		DZA65_RS17855	0.34	+1.0
3,842,425	+		DZA65_RS17855	0.34	+0.8
3,842,426	-		DZA65_RS17855	0.34	+0.8
3,842,426	-		DZA65_RS17855	0.34	-1.4
3,842,426	-		DZA65_RS17855	0.34	-1.2
3,842,426	-		DZA65_RS17855	0.34	+0.2
3,842,426	-		DZA65_RS17855	0.34	-1.1
3,842,426	-		DZA65_RS17855	0.34	+0.3
3,842,426	-		DZA65_RS17855	0.34	-2.0
3,842,426	-		DZA65_RS17855	0.34	+0.5
3,842,426	-				-1.5
3,842,426	-		DZA65_RS17855	0.34	+0.4
3,842,426	-		DZA65_RS17855	0.34	+0.7
3,842,426	-		DZA65_RS17855	0.34	-2.8
3,842,468	+		DZA65_RS17855	0.40	-0.2
3,842,512	-		DZA65_RS17855	0.46	-0.9
3,842,512	-		DZA65_RS17855	0.46	+1.4
3,842,772	-		DZA65_RS17855	0.81	-0.2
3,842,772	-		DZA65_RS17855	0.81	-2.2
3,842,772	-		DZA65_RS17855	0.81	+0.6
3,842,772	-		DZA65_RS17855	0.81	+0.4
3,842,772	-		DZA65_RS17855	0.81	-0.4
3,842,798	+		DZA65_RS17855	0.85	-0.3
3,842,929	-				-0.4
3,843,081	+		DZA65_RS17860	0.23	+1.1
3,843,178	+		DZA65_RS17860	0.36	+0.1
3,843,178	+		DZA65_RS17860	0.36	-1.7
3,843,179	-		DZA65_RS17860	0.36	+0.6
3,843,607	-				-0.5
3,843,648	+				+0.9
3,843,648	+				+0.2
3,843,649	-				-0.9
3,843,650	+				-0.4
3,843,650	+				-1.2
3,843,650	+				+0.8
3,843,650	+				-0.8
3,843,650	+				+0.2
3,843,651	-				+1.1
3,843,651	-				-0.5
3,843,651	-				+1.4
3,843,651	-				-0.6
3,843,651	-				-1.2
3,843,651	-				+0.1
3,843,651	-				-0.5
3,843,651	-				+2.6
3,843,651	-				+1.0
3,843,654	+				+0.2
3,843,784	+				-1.8
3,843,785	-				-0.3
3,843,860	-				+0.1
3,843,902	+				-1.1
3,843,902	+				+0.8
3,843,902	+				+2.2
3,843,902	+				-0.8
3,843,903	-				-0.2
3,843,903	-				-0.4
3,843,903	-				+0.4