Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14910

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,248,878	+		DZA65_RS14905	0.66	-0.5
3,248,883	-		DZA65_RS14905	0.66	+1.2
3,248,922	+		DZA65_RS14905	0.70	-0.2
3,248,926	+		DZA65_RS14905	0.70	-0.1
3,248,926	+		DZA65_RS14905	0.70	-1.2
3,248,926	+		DZA65_RS14905	0.70	-1.8
3,248,926	+		DZA65_RS14905	0.70	-0.2
3,248,930	+		DZA65_RS14905	0.70	+0.2
3,248,931	-		DZA65_RS14905	0.70	-0.4
3,248,931	-		DZA65_RS14905	0.70	+1.2
3,248,931	-		DZA65_RS14905	0.70	+2.0
3,248,938	+		DZA65_RS14905	0.71	+0.1
3,248,938	+		DZA65_RS14905	0.71	+0.4
3,249,007	+		DZA65_RS14905	0.77	-0.2
3,249,008	-		DZA65_RS14905	0.77	-0.7
3,249,020	+		DZA65_RS14905	0.78	+2.1
3,249,021	-		DZA65_RS14905	0.78	+0.3
3,249,021	-		DZA65_RS14905	0.78	-0.8
3,249,023	+		DZA65_RS14905	0.79	-0.3
3,249,023	+		DZA65_RS14905	0.79	-0.3
3,249,023	+		DZA65_RS14905	0.79	+0.6
3,249,023	+		DZA65_RS14905	0.79	+0.1
3,249,024	-		DZA65_RS14905	0.79	+0.1
3,249,201	+				+0.2
3,249,201	+				-1.2
3,249,201	+				-0.3
3,249,201	+				-0.2
3,249,201	+				-0.8
3,249,201	+				-0.4
3,249,201	+				-0.1
3,249,201	+				+1.2
3,249,202	-				+1.4
3,249,202	-				-0.9
3,249,202	-				-1.0
3,249,202	-				-1.0
3,249,202	-				-0.0
3,249,249	-				+0.4
3,249,249	-				-2.0
3,249,268	+				-0.3
3,249,272	-				-0.9
3,249,272	-				-0.4
3,249,272	-				+0.4
3,249,281	+				+1.2
3,249,295	+				+1.0
3,249,296	-				-0.7
3,249,296	-				+0.6
3,249,316	+				-0.4
3,249,321	+				-1.2
3,249,322	-				+1.6
3,249,322	-				+1.5
3,249,355	-				-1.0
3,249,382	-				-2.2
3,249,382	-				-0.8
3,249,525	+				-1.6
3,249,677	-				+0.6
3,249,863	-				+0.7
3,249,886	+				-1.4
3,249,886	+				-1.4
3,249,887	-				+0.7
3,249,895	+				+0.1
3,249,895	+				-0.0
3,249,896	-				+0.8
3,249,896	-				-1.4
3,249,896	-				+0.6
3,250,003	+				-0.4
3,250,003	+				-0.2
3,250,003	+				-1.4
3,250,004	-				+0.1
3,250,004	-				-0.9
3,250,004	-				+0.2
3,250,034	+		DZA65_RS14910	0.11	-0.8
3,250,034	+		DZA65_RS14910	0.11	+0.2
3,250,034	+		DZA65_RS14910	0.11	-0.1
3,250,035	-		DZA65_RS14910	0.11	+1.2
3,250,035	-		DZA65_RS14910	0.11	-0.7
3,250,035	-		DZA65_RS14910	0.11	-1.4
3,250,035	-		DZA65_RS14910	0.11	-0.0
3,250,035	-		DZA65_RS14910	0.11	+0.2
3,250,294	+		DZA65_RS14910	0.27	-2.0
3,250,295	-		DZA65_RS14910	0.27	-2.2
3,250,295	-		DZA65_RS14910	0.27	-2.1
3,250,298	-		DZA65_RS14910	0.27	-0.3
3,250,383	-		DZA65_RS14910	0.33	-0.0
3,250,588	-		DZA65_RS14910	0.46	-0.1
3,250,735	+		DZA65_RS14910	0.55	+0.1
3,250,735	+		DZA65_RS14910	0.55	+0.9
3,250,735	+		DZA65_RS14910	0.55	-0.4
3,250,735	+		DZA65_RS14910	0.55	-2.0
3,250,735	+		DZA65_RS14910	0.55	-2.0
3,250,735	+		DZA65_RS14910	0.55	-1.0
3,250,735	+		DZA65_RS14910	0.55	+1.6
3,250,735	+		DZA65_RS14910	0.55	-1.7
3,250,735	+		DZA65_RS14910	0.55	-0.2
3,250,735	+		DZA65_RS14910	0.55	+0.5
3,250,736	-		DZA65_RS14910	0.55	-0.4
3,250,736	-		DZA65_RS14910	0.55	-0.4
3,250,736	-		DZA65_RS14910	0.55	+0.9
3,250,736	-				+0.6
3,250,744	+		DZA65_RS14910	0.55	-0.4
3,250,744	+		DZA65_RS14910	0.55	+1.0
3,250,744	+		DZA65_RS14910	0.55	-0.0
3,250,745	-		DZA65_RS14910	0.55	+1.6
3,250,745	-		DZA65_RS14910	0.55	-0.4
3,250,745	-		DZA65_RS14910	0.55	-0.0
3,250,756	+		DZA65_RS14910	0.56	-0.9
3,250,756	+		DZA65_RS14910	0.56	+0.4
3,250,756	+		DZA65_RS14910	0.56	+0.6
3,250,756	+		DZA65_RS14910	0.56	+0.2
3,250,790	+		DZA65_RS14910	0.58	-1.2
3,250,790	+		DZA65_RS14910	0.58	-1.2
3,250,809	-		DZA65_RS14910	0.60	+0.6
3,250,887	-		DZA65_RS14910	0.64	+0.9
3,250,962	+		DZA65_RS14910	0.69	+0.8
3,250,962	+		DZA65_RS14910	0.69	+1.0
3,250,963	-		DZA65_RS14910	0.69	-0.7
3,250,963	-		DZA65_RS14910	0.69	-0.6
3,250,963	-		DZA65_RS14910	0.69	+1.4
3,250,963	-		DZA65_RS14910	0.69	+1.4
3,251,068	+		DZA65_RS14910	0.76	+0.3
3,251,147	-		DZA65_RS14910	0.81	+0.8
3,251,147	-		DZA65_RS14910	0.81	-2.0
3,251,147	-		DZA65_RS14910	0.81	+2.0
3,251,150	+		DZA65_RS14910	0.81	+1.0
3,251,150	+		DZA65_RS14910	0.81	-0.1
3,251,150	+		DZA65_RS14910	0.81	+0.0
3,251,150	+		DZA65_RS14910	0.81	+0.4
3,251,150	+		DZA65_RS14910	0.81	-2.0
3,251,151	-		DZA65_RS14910	0.81	-0.2
3,251,151	-		DZA65_RS14910	0.81	-0.7
3,251,205	-		DZA65_RS14910	0.84	+1.2
3,251,218	+		DZA65_RS14910	0.85	+0.4
3,251,218	+		DZA65_RS14910	0.85	+0.6
3,251,219	-		DZA65_RS14910	0.85	-1.8
3,251,219	-		DZA65_RS14910	0.85	-0.7
3,251,219	-		DZA65_RS14910	0.85	+1.0
3,251,219	-		DZA65_RS14910	0.85	+2.4
3,251,219	-		DZA65_RS14910	0.85	-1.2
3,251,219	-		DZA65_RS14910	0.85	-0.8
3,251,219	-		DZA65_RS14910	0.85	+0.2
3,251,324	+				+0.3
3,251,324	+				+0.9
3,251,324	+				+0.2
3,251,324	+				+1.8
3,251,324	+				+0.8
3,251,325	-				-1.4
3,251,325	-				-0.8
3,251,325	-				-0.0
3,251,325	-				-0.7
3,251,414	+				+2.0
3,251,435	+				+0.2
3,251,435	+				-0.9
3,251,460	+				+1.9
3,251,460	+				-0.8
3,251,461	-				-0.2
3,251,491	+				-0.8
3,251,492	-				-0.7
3,251,554	+				-2.0
3,251,555	-				-1.5
3,251,623	+				+0.9
3,251,623	+				+0.6
3,251,623	+				-0.1
3,251,623	+				+0.1
3,251,623	+				-0.2
3,251,624	-				+0.4
3,251,624	-				-0.7
3,251,627	+				+0.5
3,251,627	+				-1.4
3,251,627	+				+1.6
3,251,627	+				+0.2
3,251,627	+				+0.8
3,251,627	+				-2.1
3,251,628	-				-1.4
3,251,628	-				+0.2
3,251,628	-				-0.4
3,251,628	-				-2.0
3,251,686	-				+3.1
3,251,699	+				+1.2
3,251,699	+				-0.2
3,251,699	+				-0.3
3,251,700	-				+2.4
3,251,781	+		DZA65_RS14915	0.13	-0.4
3,251,782	-		DZA65_RS14915	0.13	+0.2
3,251,796	+		DZA65_RS14915	0.15	-0.2
3,251,797	-		DZA65_RS14915	0.15	+1.6
3,251,797	-		DZA65_RS14915	0.15	+0.4
3,251,797	-		DZA65_RS14915	0.15	+0.6
3,251,859	+		DZA65_RS14915	0.22	+0.3
3,251,859	+				+3.2
3,251,859	+		DZA65_RS14915	0.22	-1.4
3,251,859	+		DZA65_RS14915	0.22	-1.2
3,251,859	+		DZA65_RS14915	0.22	-0.4
3,251,859	+		DZA65_RS14915	0.22	+1.0
3,251,860	-		DZA65_RS14915	0.22	-0.7
3,251,860	-		DZA65_RS14915	0.22	-0.3
3,251,860	-		DZA65_RS14915	0.22	-0.2
3,251,860	-		DZA65_RS14915	0.22	-0.5
3,251,860	-		DZA65_RS14915	0.22	+0.7
3,251,860	-		DZA65_RS14915	0.22	+1.2
3,251,860	-		DZA65_RS14915	0.22	-0.5
3,251,860	-		DZA65_RS14915	0.22	-0.4
3,251,860	-				+0.2
3,251,860	-		DZA65_RS14915	0.22	-1.6
3,251,860	-		DZA65_RS14915	0.22	-1.0
3,251,861	+		DZA65_RS14915	0.22	+0.6
3,251,861	+		DZA65_RS14915	0.22	+0.1
3,251,862	-		DZA65_RS14915	0.22	-0.2
3,252,068	-		DZA65_RS14915	0.46	-1.8
3,252,068	-		DZA65_RS14915	0.46	+0.5
3,252,068	-		DZA65_RS14915	0.46	+0.2
3,252,068	-		DZA65_RS14915	0.46	+0.8
3,252,259	+		DZA65_RS14915	0.67	-2.0
3,252,292	+		DZA65_RS14915	0.71	+0.3
3,252,293	-		DZA65_RS14915	0.71	-0.5
3,252,366	+		DZA65_RS14915	0.79	-0.7
3,252,367	-		DZA65_RS14915	0.80	-1.1
3,252,431	+		DZA65_RS14915	0.87	-0.7
3,252,431	+		DZA65_RS14915	0.87	+1.1
3,252,432	-		DZA65_RS14915	0.87	+0.6