Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10210

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,157,809	+		DZA65_RS10205	0.45	+0.4
2,157,809	+		DZA65_RS10205	0.45	-0.2
2,157,809	+		DZA65_RS10205	0.45	-1.0
2,157,809	+		DZA65_RS10205	0.45	+0.6
2,157,810	-		DZA65_RS10205	0.45	+0.1
2,157,810	-		DZA65_RS10205	0.45	+0.6
2,157,810	-		DZA65_RS10205	0.45	+1.0
2,157,877	+		DZA65_RS10205	0.50	+1.6
2,158,012	+		DZA65_RS10205	0.60	+0.3
2,158,012	+		DZA65_RS10205	0.60	-1.8
2,158,012	+		DZA65_RS10205	0.60	+0.2
2,158,012	+		DZA65_RS10205	0.60	-0.1
2,158,012	+		DZA65_RS10205	0.60	-0.2
2,158,012	+		DZA65_RS10205	0.60	-1.9
2,158,012	+		DZA65_RS10205	0.60	+0.1
2,158,012	+		DZA65_RS10205	0.60	-2.2
2,158,013	-		DZA65_RS10205	0.60	-0.7
2,158,013	-		DZA65_RS10205	0.60	+0.8
2,158,013	-		DZA65_RS10205	0.60	+1.4
2,158,013	-		DZA65_RS10205	0.60	-2.1
2,158,013	-		DZA65_RS10205	0.60	-1.6
2,158,013	-		DZA65_RS10205	0.60	-0.8
2,158,013	-		DZA65_RS10205	0.60	-0.6
2,158,070	+		DZA65_RS10205	0.64	-1.1
2,158,071	-		DZA65_RS10205	0.64	+0.6
2,158,123	+		DZA65_RS10205	0.68	+0.5
2,158,124	-		DZA65_RS10205	0.68	-1.6
2,158,139	+		DZA65_RS10205	0.70	+0.8
2,158,140	-		DZA65_RS10205	0.70	-0.5
2,158,192	+		DZA65_RS10205	0.74	-0.0
2,158,192	+		DZA65_RS10205	0.74	+0.4
2,158,195	+		DZA65_RS10205	0.74	-0.1
2,158,196	-				+0.4
2,158,196	-		DZA65_RS10205	0.74	-1.4
2,158,206	-		DZA65_RS10205	0.75	-2.1
2,158,206	-		DZA65_RS10205	0.75	-0.2
2,158,206	-		DZA65_RS10205	0.75	-1.8
2,158,206	-		DZA65_RS10205	0.75	+0.1
2,158,274	+		DZA65_RS10205	0.80	+0.1
2,158,274	+		DZA65_RS10205	0.80	-0.9
2,158,274	+		DZA65_RS10205	0.80	-0.0
2,158,275	-		DZA65_RS10205	0.80	-0.7
2,158,275	-		DZA65_RS10205	0.80	-0.4
2,158,301	+		DZA65_RS10205	0.82	-0.5
2,158,302	-		DZA65_RS10205	0.82	-1.6
2,158,325	+		DZA65_RS10205	0.84	-0.1
2,158,326	-		DZA65_RS10205	0.84	-0.7
2,158,326	-		DZA65_RS10205	0.84	-2.2
2,158,417	+				-0.2
2,158,417	+				+0.5
2,158,418	-				-1.2
2,158,496	+				+0.4
2,158,497	-				-0.1
2,158,497	-				-0.1
2,158,498	+				+0.3
2,158,498	+				-0.8
2,158,498	+				+0.2
2,158,499	-				+0.7
2,158,538	+				+1.7
2,158,538	+				+0.0
2,158,538	+				-0.9
2,158,593	+				-0.9
2,158,593	+				-2.4
2,158,593	+				-0.1
2,158,594	-				+0.1
2,158,594	-				+1.4
2,158,598	+				-1.2
2,158,598	+				+0.8
2,158,599	-				+0.7
2,158,599	-				+1.4
2,158,669	-				-0.0
2,158,669	-				-0.6
2,158,701	+				-0.3
2,158,701	+				+1.7
2,158,701	+				-0.7
2,158,701	+				-1.5
2,158,701	+				-0.4
2,158,701	+				-1.6
2,158,701	+				+0.4
2,158,701	+				+0.2
2,158,701	+				-0.2
2,158,701	+				-0.2
2,158,701	+				-0.0
2,158,701	+				-1.9
2,158,701	+				-0.3
2,158,702	-				+2.4
2,158,702	-				+0.1
2,158,702	-				-0.9
2,158,702	-				-0.3
2,158,702	-				-0.9
2,158,702	-				-0.8
2,158,702	-				-0.9
2,158,702	-				+1.7
2,158,702	-				+1.0
2,158,702	-				-0.3
2,158,705	+				-0.9
2,158,705	+				-2.4
2,158,705	+				-0.1
2,158,705	+				-1.1
2,158,706	-				+1.0
2,158,706	-				+0.7
2,158,706	-				+0.8
2,158,726	+				+1.2
2,158,727	-				+1.1
2,158,727	-				+2.4
2,158,759	+				-0.8
2,158,759	+				-2.2
2,158,759	+				-0.5
2,158,759	+				-0.3
2,158,760	-				-0.9
2,158,760	-				-0.0
2,158,823	+				+2.4
2,158,823	+				-0.2
2,158,823	+				-0.1
2,158,824	-				+0.2
2,158,824	-				-0.5
2,158,824	-				-0.6
2,158,824	-				-2.2
2,158,824	-				+3.3
2,158,827	+				-2.6
2,158,828	-				-0.9
2,158,828	-				+1.4
2,158,828	-				+0.0
2,158,863	+				-0.4
2,158,863	+				+1.2
2,158,864	-				+0.2
2,158,879	+				+0.1
2,158,880	-				-1.2
2,158,880	-				+0.1
2,158,891	+		DZA65_RS10210	0.10	-0.3
2,158,891	+		DZA65_RS10210	0.10	+1.8
2,158,892	-		DZA65_RS10210	0.10	-0.6
2,158,892	-		DZA65_RS10210	0.10	-1.2
2,158,892	-		DZA65_RS10210	0.10	+0.9
2,158,900	+		DZA65_RS10210	0.11	+1.1
2,158,900	+		DZA65_RS10210	0.11	-1.0
2,158,900	+		DZA65_RS10210	0.11	+0.4
2,158,900	+		DZA65_RS10210	0.11	-1.6
2,158,900	+		DZA65_RS10210	0.11	-1.0
2,158,900	+		DZA65_RS10210	0.11	-0.8
2,158,900	+		DZA65_RS10210	0.11	+1.5
2,158,900	+		DZA65_RS10210	0.11	+0.1
2,158,900	+		DZA65_RS10210	0.11	-0.3
2,158,900	+		DZA65_RS10210	0.11	+0.4
2,158,900	+		DZA65_RS10210	0.11	-1.8
2,158,900	+		DZA65_RS10210	0.11	+0.3
2,158,900	+		DZA65_RS10210	0.11	-0.6
2,158,901	-		DZA65_RS10210	0.11	-1.7
2,158,901	-		DZA65_RS10210	0.11	-0.9
2,158,901	-		DZA65_RS10210	0.11	-0.9
2,158,901	-		DZA65_RS10210	0.11	+0.1
2,158,901	-				-1.2
2,158,942	+		DZA65_RS10210	0.16	-1.6
2,158,942	+		DZA65_RS10210	0.16	+1.1
2,158,943	-		DZA65_RS10210	0.16	+0.1
2,158,943	-		DZA65_RS10210	0.16	-0.6
2,158,943	-		DZA65_RS10210	0.16	-0.2
2,158,943	-		DZA65_RS10210	0.16	-1.8
2,158,944	+		DZA65_RS10210	0.16	+0.4
2,158,945	-		DZA65_RS10210	0.16	+0.4
2,158,945	-		DZA65_RS10210	0.16	+0.1
2,158,945	-		DZA65_RS10210	0.16	-1.6
2,158,945	-		DZA65_RS10210	0.16	-0.2
2,158,975	+		DZA65_RS10210	0.19	+0.4
2,158,976	-		DZA65_RS10210	0.20	-0.2
2,158,976	-		DZA65_RS10210	0.20	-0.4
2,159,058	+		DZA65_RS10210	0.29	-0.8
2,159,058	+		DZA65_RS10210	0.29	-0.7
2,159,059	-		DZA65_RS10210	0.29	-0.8
2,159,059	-				-0.6
2,159,059	-		DZA65_RS10210	0.29	-0.2
2,159,059	-		DZA65_RS10210	0.29	-2.2
2,159,179	-		DZA65_RS10210	0.42	-0.3
2,159,226	+		DZA65_RS10210	0.47	+0.6
2,159,226	+		DZA65_RS10210	0.47	+1.1
2,159,226	+		DZA65_RS10210	0.47	+0.3
2,159,226	+		DZA65_RS10210	0.47	+0.1
2,159,226	+		DZA65_RS10210	0.47	-0.7
2,159,226	+		DZA65_RS10210	0.47	-0.4
2,159,227	-		DZA65_RS10210	0.47	+1.4
2,159,227	-		DZA65_RS10210	0.47	+0.0
2,159,227	-		DZA65_RS10210	0.47	-0.4
2,159,227	-		DZA65_RS10210	0.47	-1.6
2,159,227	-		DZA65_RS10210	0.47	+0.7
2,159,227	-		DZA65_RS10210	0.47	-0.9
2,159,227	-		DZA65_RS10210	0.47	+0.4
2,159,227	-		DZA65_RS10210	0.47	-1.0
2,159,376	+		DZA65_RS10210	0.64	-0.6
2,159,381	+		DZA65_RS10210	0.65	-1.2
2,159,382	-		DZA65_RS10210	0.65	-2.0
2,159,430	+		DZA65_RS10210	0.70	+0.1
2,159,488	+		DZA65_RS10210	0.77	+1.2
2,159,488	+		DZA65_RS10210	0.77	-0.6
2,159,489	-		DZA65_RS10210	0.77	+2.0
2,159,504	+		DZA65_RS10210	0.78	+1.6
2,159,505	-		DZA65_RS10210	0.78	+0.6
2,159,539	+		DZA65_RS10210	0.82	-0.2
2,159,540	-		DZA65_RS10210	0.82	-0.6
2,159,540	-		DZA65_RS10210	0.82	-1.0
2,159,545	+		DZA65_RS10210	0.83	+1.1
2,159,545	+		DZA65_RS10210	0.83	-0.1
2,159,596	+		DZA65_RS10210	0.89	+0.5
2,159,596	+		DZA65_RS10210	0.89	+2.4
2,159,597	-		DZA65_RS10210	0.89	-0.2
2,159,597	-		DZA65_RS10210	0.89	-1.2
2,159,597	-		DZA65_RS10210	0.89	+0.1
2,159,597	-		DZA65_RS10210	0.89	+1.8
2,159,623	+				-0.6
2,159,799	-				+1.2
2,159,825	+		DZA65_RS10215	0.11	-0.4
2,159,825	+		DZA65_RS10215	0.11	+0.2
2,159,825	+		DZA65_RS10215	0.11	+0.7
2,159,825	+		DZA65_RS10215	0.11	-1.9
2,159,825	+		DZA65_RS10215	0.11	-0.0
2,159,825	+		DZA65_RS10215	0.11	+0.5
2,159,825	+		DZA65_RS10215	0.11	+1.4
2,159,826	-		DZA65_RS10215	0.11	-0.4
2,159,826	-		DZA65_RS10215	0.11	-0.9
2,159,826	-		DZA65_RS10215	0.11	-1.4
2,160,040	+		DZA65_RS10215	0.39	-0.0
2,160,141	+		DZA65_RS10215	0.52	+0.7
2,160,246	+		DZA65_RS10215	0.65	-0.2
2,160,246	+		DZA65_RS10215	0.65	+0.4
2,160,246	+		DZA65_RS10215	0.65	-0.8
2,160,246	+		DZA65_RS10215	0.65	+0.6
2,160,247	-		DZA65_RS10215	0.65	+0.6
2,160,247	-		DZA65_RS10215	0.65	-0.5
2,160,247	-		DZA65_RS10215	0.65	-0.9
2,160,247	-		DZA65_RS10215	0.65	-1.2
2,160,247	-		DZA65_RS10215	0.65	-0.3
2,160,273	-		DZA65_RS10215	0.69	-0.1
2,160,479	-				+0.2
2,160,479	-				-1.9
2,160,479	-				+1.4
2,160,486	+				-0.6
2,160,516	+				-1.0
2,160,516	+				+0.7
2,160,521	+				+0.6
2,160,552	+				-0.6
2,160,552	+				-0.0
2,160,579	+				+0.4
2,160,580	-				-0.6
2,160,580	-				+0.7
2,160,580	-				+1.0
2,160,632	+				+0.3
2,160,632	+				-1.6
2,160,632	+				+0.4
2,160,636	+				+0.0