Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS04910

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,016,131	-		DZA65_RS04900	0.57	+0.3
1,016,152	+		DZA65_RS04900	0.58	+0.2
1,016,152	+		DZA65_RS04900	0.58	-1.3
1,016,152	+		DZA65_RS04900	0.58	-1.6
1,016,153	-		DZA65_RS04900	0.59	-0.7
1,016,155	-		DZA65_RS04900	0.59	+0.3
1,016,178	+		DZA65_RS04900	0.61	-2.0
1,016,178	+		DZA65_RS04900	0.61	+0.5
1,016,178	+		DZA65_RS04900	0.61	-0.1
1,016,179	-		DZA65_RS04900	0.61	-0.2
1,016,179	-		DZA65_RS04900	0.61	-1.2
1,016,228	+		DZA65_RS04900	0.65	+0.4
1,016,228	+		DZA65_RS04900	0.65	-0.2
1,016,228	+		DZA65_RS04900	0.65	+0.2
1,016,228	+		DZA65_RS04900	0.65	-1.2
1,016,228	+		DZA65_RS04900	0.65	-0.2
1,016,228	+		DZA65_RS04900	0.65	-0.5
1,016,228	+		DZA65_RS04900	0.65	+1.2
1,016,228	+		DZA65_RS04900	0.65	+1.8
1,016,229	-		DZA65_RS04900	0.65	-2.2
1,016,229	-		DZA65_RS04900	0.65	-0.2
1,016,229	-		DZA65_RS04900	0.65	-0.2
1,016,229	-		DZA65_RS04900	0.65	-0.2
1,016,229	-		DZA65_RS04900	0.65	+0.2
1,016,229	-		DZA65_RS04900	0.65	+0.2
1,016,232	+		DZA65_RS04900	0.65	-0.2
1,016,233	-		DZA65_RS04900	0.65	-2.3
1,016,233	-		DZA65_RS04900	0.65	+0.8
1,016,233	-		DZA65_RS04900	0.65	-1.6
1,016,233	-		DZA65_RS04900	0.65	+0.3
1,016,289	+		DZA65_RS04900	0.70	-0.4
1,016,290	-				-0.2
1,016,290	-		DZA65_RS04900	0.70	-0.1
1,016,290	-		DZA65_RS04900	0.70	-1.0
1,016,303	+		DZA65_RS04900	0.71	-0.2
1,016,303	+		DZA65_RS04900	0.71	-0.6
1,016,304	-		DZA65_RS04900	0.71	-1.2
1,016,304	-		DZA65_RS04900	0.71	+0.2
1,016,451	+		DZA65_RS04900	0.83	+0.9
1,016,464	-		DZA65_RS04900	0.84	+0.7
1,016,686	+				+0.0
1,016,686	+				+0.8
1,016,686	+				-1.6
1,016,686	+				+0.5
1,016,686	+				+0.4
1,016,687	-				-0.7
1,016,687	-				-0.2
1,016,687	-				+0.8
1,016,730	-		DZA65_RS04905	0.18	+2.1
1,016,730	-		DZA65_RS04905	0.18	+0.8
1,016,750	+		DZA65_RS04905	0.23	-0.0
1,016,750	+		DZA65_RS04905	0.23	-0.0
1,016,751	-		DZA65_RS04905	0.23	+0.3
1,016,751	-		DZA65_RS04905	0.23	+0.0
1,016,751	-		DZA65_RS04905	0.23	+0.5
1,016,751	-		DZA65_RS04905	0.23	+0.2
1,016,752	+		DZA65_RS04905	0.23	-2.1
1,016,752	+		DZA65_RS04905	0.23	-1.4
1,016,800	-		DZA65_RS04905	0.34	-0.1
1,016,800	-		DZA65_RS04905	0.34	-1.6
1,017,077	+				+0.6
1,017,077	+				+0.0
1,017,086	+				+0.8
1,017,103	+				-0.8
1,017,103	+				+1.4
1,017,164	+				-0.1
1,017,164	+				-1.2
1,017,164	+				-0.5
1,017,164	+				+0.4
1,017,164	+				+0.8
1,017,164	+				-0.2
1,017,165	-				+2.3
1,017,165	-				-0.8
1,017,205	+				-0.5
1,017,205	+				+0.2
1,017,205	+				-0.2
1,017,205	+				+0.2
1,017,205	+				-0.6
1,017,205	+				+0.6
1,017,205	+				+0.0
1,017,205	+				+0.8
1,017,205	+				-0.5
1,017,205	+				-0.7
1,017,205	+				-1.0
1,017,205	+				+0.0
1,017,205	+				-1.0
1,017,206	-				+1.8
1,017,206	-				+0.2
1,017,206	-				+0.6
1,017,206	-				-0.4
1,017,206	-				-0.6
1,017,206	-				-0.2
1,017,206	-				+0.2
1,017,206	-				+0.3
1,017,209	+				-2.7
1,017,210	-				+2.1
1,017,210	-				-1.8
1,017,245	+				+1.3
1,017,266	+				+0.6
1,017,350	+		DZA65_RS04910	0.15	-2.7
1,017,350	+		DZA65_RS04910	0.15	-0.8
1,017,350	+		DZA65_RS04910	0.15	+1.2
1,017,350	+		DZA65_RS04910	0.15	+0.4
1,017,351	-		DZA65_RS04910	0.15	-0.9
1,017,351	-		DZA65_RS04910	0.15	-0.4
1,017,397	+		DZA65_RS04910	0.18	+0.2
1,017,397	+		DZA65_RS04910	0.18	-0.9
1,017,404	-		DZA65_RS04910	0.18	-0.1
1,017,422	+		DZA65_RS04910	0.19	+0.3
1,017,422	+		DZA65_RS04910	0.19	-1.3
1,017,422	+		DZA65_RS04910	0.19	+0.3
1,017,422	+		DZA65_RS04910	0.19	-1.3
1,017,422	+		DZA65_RS04910	0.19	-0.3
1,017,423	-				-1.3
1,017,423	-		DZA65_RS04910	0.19	+0.9
1,017,425	+		DZA65_RS04910	0.19	-2.1
1,017,455	+		DZA65_RS04910	0.21	+0.7
1,017,456	-		DZA65_RS04910	0.21	+0.3
1,017,498	+		DZA65_RS04910	0.24	-0.5
1,017,498	+		DZA65_RS04910	0.24	+0.6
1,017,498	+		DZA65_RS04910	0.24	+0.3
1,017,498	+		DZA65_RS04910	0.24	+0.2
1,017,498	+		DZA65_RS04910	0.24	+0.9
1,017,498	+		DZA65_RS04910	0.24	-2.1
1,017,498	+		DZA65_RS04910	0.24	+0.2
1,017,498	+		DZA65_RS04910	0.24	+0.6
1,017,498	+		DZA65_RS04910	0.24	+0.3
1,017,499	-		DZA65_RS04910	0.24	-1.2
1,017,499	-		DZA65_RS04910	0.24	-0.8
1,017,499	-		DZA65_RS04910	0.24	+0.0
1,017,499	-		DZA65_RS04910	0.24	-0.5
1,017,500	+		DZA65_RS04910	0.24	-0.6
1,017,500	+		DZA65_RS04910	0.24	+2.3
1,017,500	+		DZA65_RS04910	0.24	-1.6
1,017,500	+		DZA65_RS04910	0.24	-0.7
1,017,500	+		DZA65_RS04910	0.24	+0.3
1,017,500	+		DZA65_RS04910	0.24	-0.4
1,017,500	+		DZA65_RS04910	0.24	-0.1
1,017,500	+		DZA65_RS04910	0.24	+0.6
1,017,501	-		DZA65_RS04910	0.24	-0.7
1,017,501	-		DZA65_RS04910	0.24	+0.2
1,017,501	-		DZA65_RS04910	0.24	-2.1
1,017,501	-		DZA65_RS04910	0.24	+0.6
1,017,501	-		DZA65_RS04910	0.24	-1.3
1,017,501	-		DZA65_RS04910	0.24	-2.3
1,017,501	-		DZA65_RS04910	0.24	-1.7
1,017,571	+		DZA65_RS04910	0.28	+0.0
1,017,578	+		DZA65_RS04910	0.28	-0.5
1,017,579	-		DZA65_RS04910	0.28	+0.4
1,017,579	-		DZA65_RS04910	0.28	+0.3
1,017,579	-		DZA65_RS04910	0.28	-1.4
1,017,579	-		DZA65_RS04910	0.28	+1.6
1,017,695	+		DZA65_RS04910	0.35	-0.8
1,017,696	-		DZA65_RS04910	0.35	+1.2
1,017,721	-		DZA65_RS04910	0.37	-2.8
1,017,741	+		DZA65_RS04910	0.38	-3.0
1,017,741	+		DZA65_RS04910	0.38	+0.4
1,017,741	+		DZA65_RS04910	0.38	-0.2
1,017,741	+		DZA65_RS04910	0.38	-1.8
1,017,741	+		DZA65_RS04910	0.38	+0.2
1,017,741	+		DZA65_RS04910	0.38	-0.8
1,017,741	+		DZA65_RS04910	0.38	+0.7
1,017,742	-		DZA65_RS04910	0.38	-2.0
1,017,742	-		DZA65_RS04910	0.38	-0.4
1,017,830	+				-1.3
1,017,830	+		DZA65_RS04910	0.43	-0.4
1,017,831	-		DZA65_RS04910	0.43	-1.8
1,017,898	-		DZA65_RS04910	0.47	-1.1
1,017,911	+		DZA65_RS04910	0.48	+0.4
1,017,911	+		DZA65_RS04910	0.48	-1.8
1,017,912	-		DZA65_RS04910	0.48	-1.6
1,017,912	-		DZA65_RS04910	0.48	+1.1
1,017,912	-		DZA65_RS04910	0.48	-1.4
1,017,968	+		DZA65_RS04910	0.51	-1.1
1,017,992	+		DZA65_RS04910	0.53	+0.7
1,017,992	+		DZA65_RS04910	0.53	-0.1
1,017,992	+		DZA65_RS04910	0.53	+1.1
1,017,993	-				-0.3
1,017,993	-		DZA65_RS04910	0.53	+1.6
1,017,993	-		DZA65_RS04910	0.53	-0.1
1,017,993	-		DZA65_RS04910	0.53	+0.1
1,018,004	-		DZA65_RS04910	0.53	+0.7
1,018,023	+		DZA65_RS04910	0.55	-1.3
1,018,023	+		DZA65_RS04910	0.55	-0.8
1,018,024	-		DZA65_RS04910	0.55	-2.3
1,018,050	-		DZA65_RS04910	0.56	+0.4
1,018,061	-		DZA65_RS04910	0.57	-0.2
1,018,070	+		DZA65_RS04910	0.57	-0.3
1,018,071	-				-1.3
1,018,071	-		DZA65_RS04910	0.57	-2.0
1,018,072	+		DZA65_RS04910	0.57	-1.3
1,018,072	+		DZA65_RS04910	0.57	-1.1
1,018,072	+		DZA65_RS04910	0.57	-0.5
1,018,072	+		DZA65_RS04910	0.57	-1.8
1,018,072	+		DZA65_RS04910	0.57	-0.6
1,018,073	-		DZA65_RS04910	0.57	+0.4
1,018,073	-		DZA65_RS04910	0.57	-1.9
1,018,073	-		DZA65_RS04910	0.57	+1.2
1,018,073	-		DZA65_RS04910	0.57	-1.7
1,018,135	-		DZA65_RS04910	0.61	-1.1
1,018,135	-		DZA65_RS04910	0.61	-0.8
1,018,181	+		DZA65_RS04910	0.64	+1.4
1,018,353	+		DZA65_RS04910	0.74	-0.3
1,018,398	-		DZA65_RS04910	0.77	+0.2
1,018,398	-		DZA65_RS04910	0.77	-0.1
1,018,398	-		DZA65_RS04910	0.77	-0.3
1,018,439	+		DZA65_RS04910	0.79	-0.3
1,018,481	+		DZA65_RS04910	0.82	+1.2
1,018,481	+		DZA65_RS04910	0.82	+1.2
1,018,524	+		DZA65_RS04910	0.84	+0.7
1,018,524	+		DZA65_RS04910	0.84	-0.1
1,018,524	+		DZA65_RS04910	0.84	+0.9
1,018,524	+		DZA65_RS04910	0.84	-1.3
1,018,525	-		DZA65_RS04910	0.84	-0.8
1,018,525	-		DZA65_RS04910	0.84	-0.6
1,018,554	-		DZA65_RS04910	0.86	+0.4
1,018,592	+		DZA65_RS04910	0.88	-1.3
1,018,593	-		DZA65_RS04910	0.88	+0.1
1,018,625	+				+0.6
1,018,625	+				-0.3
1,018,626	-				+2.7
1,018,626	-				+0.7
1,018,626	-				+1.2
1,018,700	+				+1.2
1,018,700	+				+1.6
1,018,700	+				-1.7
1,018,701	-				-0.4
1,018,701	-				+0.9
1,018,801	-				+0.3
1,018,810	-				+0.4
1,018,818	+				-1.4
1,018,819	-				+0.7
1,018,819	-				-1.1
1,018,821	+				+1.4
1,018,822	-				-0.3
1,018,822	-				-1.7
1,018,891	+				-0.6
1,018,891	+				-0.1
1,018,910	+				+2.2
1,018,910	+				-1.7
1,018,910	+				-1.8
1,018,910	+				-0.3
1,018,911	-				+0.2
1,018,949	+		DZA65_RS04915	0.11	-1.4
1,018,949	+		DZA65_RS04915	0.11	-1.6
1,018,949	+		DZA65_RS04915	0.11	+0.6
1,018,950	-		DZA65_RS04915	0.12	-0.3
1,018,950	-		DZA65_RS04915	0.12	-0.3
1,018,954	-		DZA65_RS04915	0.12	+0.7
1,018,984	+		DZA65_RS04915	0.14	+0.6
1,018,985	-		DZA65_RS04915	0.14	-0.6
1,018,985	-		DZA65_RS04915	0.14	+0.1
1,018,985	-		DZA65_RS04915	0.14	+0.0
1,019,023	+		DZA65_RS04915	0.17	-0.7
1,019,023	+		DZA65_RS04915	0.17	+0.7
1,019,023	+		DZA65_RS04915	0.17	+0.6
1,019,023	+		DZA65_RS04915	0.17	-0.3
1,019,023	+		DZA65_RS04915	0.17	-1.0
1,019,023	+		DZA65_RS04915	0.17	+0.3
1,019,023	+		DZA65_RS04915	0.17	+1.3
1,019,023	+		DZA65_RS04915	0.17	-0.3
1,019,023	+		DZA65_RS04915	0.17	-1.3
1,019,023	+		DZA65_RS04915	0.17	+0.2
1,019,023	+		DZA65_RS04915	0.17	-0.8
1,019,023	+		DZA65_RS04915	0.17	-1.4
1,019,023	+		DZA65_RS04915	0.17	-0.7
1,019,024	-		DZA65_RS04915	0.17	+0.2
1,019,024	-		DZA65_RS04915	0.17	-0.1
1,019,024	-		DZA65_RS04915	0.17	-0.0
1,019,024	-		DZA65_RS04915	0.17	-0.6
1,019,024	-		DZA65_RS04915	0.17	+0.3
1,019,024	-		DZA65_RS04915	0.17	+0.0
1,019,024	-		DZA65_RS04915	0.17	-1.3
1,019,024	-		DZA65_RS04915	0.17	-0.2
1,019,024	-		DZA65_RS04915	0.17	+0.7
1,019,024	-		DZA65_RS04915	0.17	-0.4
1,019,024	-		DZA65_RS04915	0.17	-1.6
1,019,024	-		DZA65_RS04915	0.17	-2.0
1,019,024	-		DZA65_RS04915	0.17	+0.5
1,019,024	-		DZA65_RS04915	0.17	-2.7
1,019,024	-		DZA65_RS04915	0.17	+0.4
1,019,024	-		DZA65_RS04915	0.17	-0.3
1,019,035	-		DZA65_RS04915	0.18	+0.6
1,019,068	+		DZA65_RS04915	0.21	-0.6
1,019,068	+		DZA65_RS04915	0.21	-0.4
1,019,068	+		DZA65_RS04915	0.21	-1.8
1,019,068	+		DZA65_RS04915	0.21	+0.2
1,019,068	+		DZA65_RS04915	0.21	-1.2
1,019,069	-		DZA65_RS04915	0.21	+0.8
1,019,069	-		DZA65_RS04915	0.21	+0.7
1,019,069	-		DZA65_RS04915	0.21	-0.7
1,019,078	-		DZA65_RS04915	0.22	+0.3
1,019,078	-		DZA65_RS04915	0.22	-0.8
1,019,123	+		DZA65_RS04915	0.25	-0.8
1,019,124	-		DZA65_RS04915	0.25	+0.3
1,019,124	-		DZA65_RS04915	0.25	+0.5
1,019,124	-		DZA65_RS04915	0.25	+0.7
1,019,124	-		DZA65_RS04915	0.25	+0.4
1,019,124	-		DZA65_RS04915	0.25	+0.4
1,019,300	+		DZA65_RS04915	0.39	+1.9
1,019,300	+		DZA65_RS04915	0.39	-0.3
1,019,300	+		DZA65_RS04915	0.39	+0.5
1,019,300	+		DZA65_RS04915	0.39	-0.3
1,019,300	+		DZA65_RS04915	0.39	-0.1
1,019,301	-		DZA65_RS04915	0.39	+1.4
1,019,301	-		DZA65_RS04915	0.39	-1.9
1,019,301	-		DZA65_RS04915	0.39	+1.0
1,019,301	-		DZA65_RS04915	0.39	-0.4
1,019,357	+		DZA65_RS04915	0.43	-0.8
1,019,358	-		DZA65_RS04915	0.43	-0.7
1,019,358	-		DZA65_RS04915	0.43	-1.3
1,019,386	+		DZA65_RS04915	0.45	-0.1
1,019,386	+		DZA65_RS04915	0.45	+1.2
1,019,386	+		DZA65_RS04915	0.45	+0.3
1,019,444	+		DZA65_RS04915	0.50	+1.6
1,019,444	+		DZA65_RS04915	0.50	-0.1
1,019,444	+		DZA65_RS04915	0.50	+0.2
1,019,444	+		DZA65_RS04915	0.50	+1.3
1,019,444	+		DZA65_RS04915	0.50	+0.4
1,019,445	-		DZA65_RS04915	0.50	-0.1
1,019,445	-		DZA65_RS04915	0.50	-1.1
1,019,445	-		DZA65_RS04915	0.50	+1.3
1,019,445	-		DZA65_RS04915	0.50	+0.7
1,019,445	-		DZA65_RS04915	0.50	-1.3
1,019,445	-		DZA65_RS04915	0.50	+0.0
1,019,598	+		DZA65_RS04915	0.62	+1.0
1,019,599	-		DZA65_RS04915	0.62	-0.1
1,019,610	+		DZA65_RS04915	0.63	-1.4
1,019,611	-		DZA65_RS04915	0.63	-0.4
1,019,635	+		DZA65_RS04915	0.65	+0.4
1,019,635	+		DZA65_RS04915	0.65	+0.3
1,019,635	+		DZA65_RS04915	0.65	+1.5
1,019,636	-		DZA65_RS04915	0.65	-0.8
1,019,636	-		DZA65_RS04915	0.65	+2.6
1,019,655	+		DZA65_RS04915	0.66	-1.3
1,019,656	-		DZA65_RS04915	0.66	+0.0