Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22360

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,836,094	+				-0.8
4,836,094	+				-0.3
4,836,094	+				-2.1
4,836,094	+				+1.0
4,836,095	-				-2.0
4,836,095	-				-1.8
4,836,095	-				-2.0
4,836,095	-				+0.6
4,836,095	-				-1.1
4,836,095	-				-0.8
4,836,095	-				-1.1
4,836,095	-				+2.0
4,836,110	+				-0.1
4,836,111	-				-0.9
4,836,111	-				+1.9
4,836,111	-				-2.0
4,836,111	-				-0.8
4,836,111	-				+0.2
4,836,111	-				+0.7
4,836,111	-				-1.0
4,836,111	-				-2.5
4,836,111	-				-1.5
4,836,121	+				-0.7
4,836,124	+				-2.3
4,836,124	+				-1.7
4,836,124	+				-1.2
4,836,124	+				+0.0
4,836,124	+				+1.5
4,836,134	+				-0.2
4,836,134	+				+0.0
4,836,134	+				-1.2
4,836,134	+				+1.0
4,836,134	+				-0.3
4,836,134	+				-0.5
4,836,134	+				-0.3
4,836,134	+				+0.0
4,836,135	-				-2.1
4,836,135	-				-1.3
4,836,135	-				+0.0
4,836,135	-				-0.4
4,836,135	-				+1.4
4,836,135	-				-1.3
4,836,135	-				+1.6
4,836,157	+				-1.4
4,836,157	+				+0.9
4,836,157	+				-0.9
4,836,157	+				+1.8
4,836,157	+				+1.4
4,836,157	+				+0.6
4,836,157	+				-0.1
4,836,157	+				-0.1
4,836,157	+				+0.5
4,836,157	+				-1.3
4,836,157	+				-1.4
4,836,157	+				-0.5
4,836,157	+				-0.4
4,836,157	+				-1.3
4,836,157	+				+0.3
4,836,157	+				-2.9
4,836,157	+				-0.6
4,836,157	+				-0.5
4,836,158	-				-0.3
4,836,158	-				-2.0
4,836,158	-				-1.0
4,836,158	-				-2.3
4,836,158	-				+0.0
4,836,158	-				-0.3
4,836,158	-				+3.0
4,836,158	-				-0.4
4,836,158	-				+0.0
4,836,158	-				+0.5
4,836,158	-				+0.0
4,836,158	-				-2.7
4,836,158	-				-0.8
4,836,158	-				+0.6
4,836,158	-				-0.5
4,836,158	-				-0.5
4,836,158	-				+0.3
4,836,158	-				+1.3
4,836,158	-				+0.2
4,836,158	-				+0.8
4,836,158	-				-1.7
4,836,158	-				-1.0
4,836,158	-				-0.5
4,836,158	-				-1.8
4,836,158	-				+0.4
4,836,158	-				-0.6
4,836,158	-				-1.7
4,836,158	-				+0.0
4,836,158	-				-2.3
4,836,158	-				-0.5
4,836,158	-				+0.2
4,836,158	-				+1.4
4,836,158	-				-0.5
4,836,158	-				-1.0
4,836,192	+				-0.5
4,836,193	-				-0.4
4,836,204	+				-1.5
4,836,204	+				-0.4
4,836,205	-				-1.3
4,836,205	-				-0.8
4,836,205	-				+0.4
4,836,205	-				+0.5
4,836,241	+		DZA65_RS22355	0.11	-1.8
4,836,241	+		DZA65_RS22355	0.11	-1.1
4,836,241	+		DZA65_RS22355	0.11	-1.1
4,836,241	+		DZA65_RS22355	0.11	+1.0
4,836,241	+		DZA65_RS22355	0.11	+0.6
4,836,241	+		DZA65_RS22355	0.11	-0.5
4,836,242	-		DZA65_RS22355	0.11	+2.6
4,836,242	-		DZA65_RS22355	0.11	-0.8
4,836,242	-		DZA65_RS22355	0.11	+0.9
4,836,242	-		DZA65_RS22355	0.11	-1.0
4,836,242	-		DZA65_RS22355	0.11	+0.1
4,836,357	+		DZA65_RS22355	0.37	-2.1
4,836,357	+		DZA65_RS22355	0.37	+2.2
4,836,357	+		DZA65_RS22355	0.37	-0.4
4,836,357	+		DZA65_RS22355	0.37	+1.0
4,836,358	-		DZA65_RS22355	0.37	+0.3
4,836,358	-		DZA65_RS22355	0.37	-0.8
4,836,358	-		DZA65_RS22355	0.37	+1.0
4,836,358	-		DZA65_RS22355	0.37	-1.9
4,836,400	+		DZA65_RS22355	0.47	-1.3
4,836,401	-		DZA65_RS22355	0.47	+0.7
4,836,401	-		DZA65_RS22355	0.47	-2.1
4,836,401	-		DZA65_RS22355	0.47	-0.4
4,836,475	+		DZA65_RS22355	0.64	+1.0
4,836,475	+		DZA65_RS22355	0.64	+0.2
4,836,476	-				+1.0
4,836,476	-		DZA65_RS22355	0.64	-0.3
4,836,476	-		DZA65_RS22355	0.64	-1.2
4,836,476	-		DZA65_RS22355	0.64	-2.5
4,836,501	+		DZA65_RS22355	0.69	+1.8
4,836,501	+		DZA65_RS22355	0.69	+0.0
4,836,502	-		DZA65_RS22355	0.70	+3.5
4,836,502	-		DZA65_RS22355	0.70	+0.9
4,836,515	+		DZA65_RS22355	0.73	+0.0
4,836,515	+		DZA65_RS22355	0.73	+0.0
4,836,515	+		DZA65_RS22355	0.73	-1.2
4,836,515	+		DZA65_RS22355	0.73	-1.0
4,836,515	+		DZA65_RS22355	0.73	+0.2
4,836,515	+		DZA65_RS22355	0.73	-0.3
4,836,515	+		DZA65_RS22355	0.73	-2.0
4,836,515	+		DZA65_RS22355	0.73	-0.2
4,836,515	+		DZA65_RS22355	0.73	-1.0
4,836,515	+		DZA65_RS22355	0.73	+0.6
4,836,515	+				+2.4
4,836,515	+		DZA65_RS22355	0.73	+0.4
4,836,515	+		DZA65_RS22355	0.73	+0.6
4,836,516	-		DZA65_RS22355	0.73	-0.2
4,836,516	-		DZA65_RS22355	0.73	-1.5
4,836,516	-		DZA65_RS22355	0.73	+0.3
4,836,516	-		DZA65_RS22355	0.73	+0.1
4,836,516	-		DZA65_RS22355	0.73	-1.7
4,836,516	-		DZA65_RS22355	0.73	+1.4
4,836,516	-		DZA65_RS22355	0.73	+0.2
4,836,549	+		DZA65_RS22355	0.80	+0.6
4,836,550	-		DZA65_RS22355	0.80	-0.1
4,836,566	+		DZA65_RS22355	0.84	+1.2
4,836,566	+		DZA65_RS22355	0.84	-0.0
4,836,566	+		DZA65_RS22355	0.84	+1.4
4,836,566	+		DZA65_RS22355	0.84	-2.0
4,836,566	+		DZA65_RS22355	0.84	-0.8
4,836,566	+		DZA65_RS22355	0.84	-0.4
4,836,566	+		DZA65_RS22355	0.84	-2.0
4,836,566	+		DZA65_RS22355	0.84	+0.2
4,836,567	-		DZA65_RS22355	0.84	+0.5
4,836,567	-		DZA65_RS22355	0.84	-0.1
4,836,567	-		DZA65_RS22355	0.84	-0.3
4,836,567	-		DZA65_RS22355	0.84	-1.5
4,836,567	-		DZA65_RS22355	0.84	+1.0
4,836,567	-		DZA65_RS22355	0.84	+1.5
4,836,634	+				-0.3
4,836,635	-				-1.0
4,836,708	-				-1.0
4,836,708	-				+0.9
4,836,909	+				+0.3
4,836,909	+				-1.0
4,836,909	+				+1.0
4,836,909	+				-0.8
4,836,909	+				+0.6
4,836,909	+				+2.0
4,836,909	+				+0.9
4,836,952	+				+1.5
4,836,952	+				-0.5
4,836,952	+				+0.1
4,836,952	+				+0.4
4,836,952	+				-0.7
4,836,952	+				+0.7
4,836,952	+				+0.6
4,836,952	+				-0.2
4,836,952	+				+2.2
4,836,952	+				-2.3
4,836,952	+				-1.8
4,836,956	+				+0.2
4,836,956	+				-2.1
4,836,956	+				+1.0
4,836,956	+				+1.9
4,836,956	+				-0.3
4,836,956	+				+0.5
4,836,956	+				-0.5
4,836,956	+				+0.9
4,836,956	+				-0.7
4,836,956	+				+0.2
4,836,956	+				+1.6
4,836,956	+				+0.1
4,836,956	+				+2.3
4,836,956	+				+0.8
4,836,956	+				-0.5
4,836,956	+				-0.5
4,836,956	+				-0.2
4,836,956	+				-2.0
4,836,956	+				-0.3
4,836,956	+				+1.4
4,836,980	+				+0.4
4,836,980	+				+1.0
4,836,980	+				-0.7
4,836,980	+				+0.0
4,836,980	+				+0.0
4,836,980	+				+3.5
4,836,980	+				-0.1
4,836,980	+				-0.3
4,836,980	+				-0.8
4,836,980	+				+1.0
4,836,980	+				-0.3
4,836,980	+				+1.2
4,836,980	+				+0.5
4,837,008	+				+0.5
4,837,008	+				-1.3
4,837,008	+				-0.1
4,837,008	+				-0.1
4,837,008	+				-1.5
4,837,008	+				+0.0
4,837,008	+				+1.0
4,837,008	+				+0.5
4,837,008	+				-1.4
4,837,008	+				-1.1
4,837,008	+				-0.8
4,837,008	+				-1.4
4,837,008	+				-0.1
4,837,008	+				-0.5
4,837,008	+				-0.3
4,837,008	+				-2.4
4,837,008	+				-0.1
4,837,008	+				-1.7
4,837,008	+				+1.0
4,837,008	+				-2.1
4,837,115	+				-1.3
4,837,115	+				+0.6
4,837,115	+				-1.0
4,837,115	+				-2.0
4,837,263	-		DZA65_RS22360	0.13	-1.5
4,837,265	+		DZA65_RS22360	0.13	-1.0
4,837,289	+				+0.0
4,837,289	+		DZA65_RS22360	0.14	-0.8
4,837,319	+		DZA65_RS22360	0.16	-3.7
4,837,324	+		DZA65_RS22360	0.16	-0.8
4,837,324	+		DZA65_RS22360	0.16	-1.5
4,837,324	+		DZA65_RS22360	0.16	-2.4
4,837,324	+		DZA65_RS22360	0.16	-1.4
4,837,324	+		DZA65_RS22360	0.16	-1.3
4,837,324	+				+1.0
4,837,337	+		DZA65_RS22360	0.17	-1.8
4,837,338	-		DZA65_RS22360	0.17	-2.0
4,837,341	+		DZA65_RS22360	0.17	+0.6
4,837,341	+		DZA65_RS22360	0.17	+1.6
4,837,341	+		DZA65_RS22360	0.17	+2.0
4,837,341	+		DZA65_RS22360	0.17	-1.5
4,837,341	+		DZA65_RS22360	0.17	-0.5
4,837,341	+		DZA65_RS22360	0.17	-2.6
4,837,341	+		DZA65_RS22360	0.17	-1.5
4,837,341	+		DZA65_RS22360	0.17	+0.0
4,837,341	+		DZA65_RS22360	0.17	-0.8
4,837,341	+		DZA65_RS22360	0.17	+1.0
4,837,341	+		DZA65_RS22360	0.17	-1.3
4,837,341	+				+0.0
4,837,341	+		DZA65_RS22360	0.17	+0.5
4,837,342	-		DZA65_RS22360	0.17	-1.3
4,837,342	-		DZA65_RS22360	0.17	-1.3
4,837,342	-		DZA65_RS22360	0.17	-2.3
4,837,446	+		DZA65_RS22360	0.23	+0.3
4,837,446	+		DZA65_RS22360	0.23	-1.3
4,837,447	-		DZA65_RS22360	0.23	-1.3
4,837,447	-		DZA65_RS22360	0.23	-1.8
4,837,458	+		DZA65_RS22360	0.23	-1.5
4,837,506	+		DZA65_RS22360	0.26	-1.5
4,837,506	+		DZA65_RS22360	0.26	-1.0
4,837,506	+		DZA65_RS22360	0.26	+0.0
4,837,506	+				-1.3
4,837,522	+		DZA65_RS22360	0.27	-2.5
4,837,522	+		DZA65_RS22360	0.27	-1.7
4,837,522	+				-0.3
4,837,522	+		DZA65_RS22360	0.27	-0.5
4,837,522	+		DZA65_RS22360	0.27	-0.1
4,837,522	+		DZA65_RS22360	0.27	-1.8
4,837,522	+		DZA65_RS22360	0.27	-1.5
4,837,522	+		DZA65_RS22360	0.27	-1.5
4,837,522	+		DZA65_RS22360	0.27	-0.5
4,837,522	+		DZA65_RS22360	0.27	+1.3
4,837,522	+		DZA65_RS22360	0.27	-1.0
4,837,522	+		DZA65_RS22360	0.27	-1.1
4,837,522	+		DZA65_RS22360	0.27	+0.5
4,837,523	-		DZA65_RS22360	0.27	-0.2
4,837,523	-		DZA65_RS22360	0.27	+0.7
4,837,523	-		DZA65_RS22360	0.27	+1.3
4,837,523	-		DZA65_RS22360	0.27	+0.5
4,837,683	+				+0.7
4,837,683	+		DZA65_RS22360	0.35	-0.3
4,837,683	+		DZA65_RS22360	0.35	-1.8
4,837,683	+		DZA65_RS22360	0.35	-0.2
4,837,683	+		DZA65_RS22360	0.35	-2.0
4,837,683	+		DZA65_RS22360	0.35	-1.4
4,837,683	+		DZA65_RS22360	0.35	+1.0
4,837,684	-				+0.0
4,837,684	-		DZA65_RS22360	0.35	-1.0
4,837,741	+		DZA65_RS22360	0.38	-1.5
4,837,741	+		DZA65_RS22360	0.38	-0.8
4,837,741	+				-1.0
4,837,741	+		DZA65_RS22360	0.38	-2.1
4,837,741	+		DZA65_RS22360	0.38	-0.1
4,837,741	+		DZA65_RS22360	0.38	-1.0
4,837,741	+		DZA65_RS22360	0.38	-0.5
4,837,741	+		DZA65_RS22360	0.38	-1.3
4,837,741	+		DZA65_RS22360	0.38	+0.5
4,837,741	+		DZA65_RS22360	0.38	-1.3
4,837,741	+		DZA65_RS22360	0.38	-1.1
4,837,741	+		DZA65_RS22360	0.38	-2.3
4,837,741	+		DZA65_RS22360	0.38	+0.0
4,837,741	+		DZA65_RS22360	0.38	-1.4
4,837,741	+		DZA65_RS22360	0.38	+1.2
4,837,741	+		DZA65_RS22360	0.38	-1.2
4,837,741	+				+0.0
4,837,741	+		DZA65_RS22360	0.38	-0.9
4,837,741	+		DZA65_RS22360	0.38	-1.8
4,837,741	+		DZA65_RS22360	0.38	-0.5
4,837,741	+				+2.0
4,837,741	+		DZA65_RS22360	0.38	-1.0
4,837,741	+		DZA65_RS22360	0.38	+0.3
4,837,742	-		DZA65_RS22360	0.38	-2.0
4,837,742	-		DZA65_RS22360	0.38	+2.8
4,837,742	-		DZA65_RS22360	0.38	-1.1
4,837,742	-				+0.5
4,837,742	-		DZA65_RS22360	0.38	-1.0
4,837,742	-		DZA65_RS22360	0.38	-1.0
4,837,742	-		DZA65_RS22360	0.38	+1.7
4,837,742	-		DZA65_RS22360	0.38	-1.5
4,837,743	+		DZA65_RS22360	0.39	-1.3
4,837,743	+		DZA65_RS22360	0.39	-1.2
4,837,743	+		DZA65_RS22360	0.39	-1.5
4,837,743	+		DZA65_RS22360	0.39	-2.0
4,837,743	+		DZA65_RS22360	0.39	-0.3
4,837,743	+		DZA65_RS22360	0.39	-2.0
4,837,743	+		DZA65_RS22360	0.39	-1.1
4,837,744	-		DZA65_RS22360	0.39	-1.0
4,837,752	+		DZA65_RS22360	0.39	-1.8
4,837,753	-		DZA65_RS22360	0.39	+0.9
4,837,785	+		DZA65_RS22360	0.41	-0.5
4,837,785	+		DZA65_RS22360	0.41	+2.8
4,837,785	+		DZA65_RS22360	0.41	-2.5
4,837,785	+		DZA65_RS22360	0.41	+0.5
4,837,797	+		DZA65_RS22360	0.41	-0.3
4,837,797	+		DZA65_RS22360	0.41	+0.0
4,837,798	-		DZA65_RS22360	0.41	-1.3
4,837,807	+		DZA65_RS22360	0.42	-1.8
4,837,807	+		DZA65_RS22360	0.42	+0.8
4,837,807	+		DZA65_RS22360	0.42	-1.3
4,837,807	+		DZA65_RS22360	0.42	+0.0
4,837,851	+		DZA65_RS22360	0.44	+1.6
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