Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21430

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,633,808	+		DZA65_RS21425	0.71	+1.0
4,633,808	+		DZA65_RS21425	0.71	-2.5
4,633,808	+		DZA65_RS21425	0.71	+0.0
4,633,808	+		DZA65_RS21425	0.71	-1.8
4,633,808	+		DZA65_RS21425	0.71	+0.4
4,633,808	+		DZA65_RS21425	0.71	-0.6
4,633,808	+		DZA65_RS21425	0.71	-0.3
4,633,808	+		DZA65_RS21425	0.71	+0.2
4,633,808	+		DZA65_RS21425	0.71	-0.4
4,633,808	+		DZA65_RS21425	0.71	-0.7
4,633,809	-		DZA65_RS21425	0.71	+0.7
4,633,809	-		DZA65_RS21425	0.71	+0.0
4,633,809	-		DZA65_RS21425	0.71	-0.5
4,633,809	-		DZA65_RS21425	0.71	+2.0
4,633,809	-		DZA65_RS21425	0.71	-1.3
4,633,809	-		DZA65_RS21425	0.71	-0.6
4,633,813	+		DZA65_RS21425	0.71	-1.9
4,633,813	+		DZA65_RS21425	0.71	+1.3
4,633,814	-		DZA65_RS21425	0.71	+0.0
4,633,819	+		DZA65_RS21425	0.72	+1.0
4,633,819	+		DZA65_RS21425	0.72	+0.4
4,633,819	+		DZA65_RS21425	0.72	+0.4
4,633,820	-		DZA65_RS21425	0.72	-0.7
4,633,821	+		DZA65_RS21425	0.72	-0.3
4,633,821	+		DZA65_RS21425	0.72	-1.0
4,633,821	+		DZA65_RS21425	0.72	+0.6
4,633,821	+		DZA65_RS21425	0.72	-2.0
4,633,821	+		DZA65_RS21425	0.72	+0.3
4,633,821	+		DZA65_RS21425	0.72	+1.6
4,633,821	+				+2.3
4,633,821	+		DZA65_RS21425	0.72	-1.2
4,633,821	+		DZA65_RS21425	0.72	-0.9
4,633,822	-		DZA65_RS21425	0.72	-1.3
4,633,822	-		DZA65_RS21425	0.72	-0.5
4,633,822	-		DZA65_RS21425	0.72	-1.6
4,633,822	-		DZA65_RS21425	0.72	+1.7
4,633,822	-		DZA65_RS21425	0.72	+1.0
4,633,822	-		DZA65_RS21425	0.72	-1.2
4,633,822	-		DZA65_RS21425	0.72	+0.2
4,633,822	-		DZA65_RS21425	0.72	-1.6
4,633,830	+		DZA65_RS21425	0.72	+0.6
4,633,830	+		DZA65_RS21425	0.72	-2.2
4,633,844	+		DZA65_RS21425	0.73	+0.8
4,633,844	+		DZA65_RS21425	0.73	+0.3
4,633,844	+		DZA65_RS21425	0.73	-0.1
4,633,844	+		DZA65_RS21425	0.73	+0.0
4,633,844	+		DZA65_RS21425	0.73	+0.4
4,633,845	-		DZA65_RS21425	0.73	+2.3
4,633,845	-		DZA65_RS21425	0.73	-1.3
4,633,885	+		DZA65_RS21425	0.75	+0.2
4,633,885	+		DZA65_RS21425	0.75	+0.0
4,633,885	+		DZA65_RS21425	0.75	+0.5
4,633,886	-		DZA65_RS21425	0.75	-0.6
4,633,886	-		DZA65_RS21425	0.75	-1.2
4,633,886	-		DZA65_RS21425	0.75	-0.9
4,633,886	-		DZA65_RS21425	0.75	+0.4
4,633,898	-		DZA65_RS21425	0.76	-2.1
4,633,898	-		DZA65_RS21425	0.76	-1.9
4,633,898	-		DZA65_RS21425	0.76	+1.7
4,633,979	+		DZA65_RS21425	0.80	+1.3
4,633,980	-		DZA65_RS21425	0.80	+1.0
4,633,980	-		DZA65_RS21425	0.80	-2.3
4,633,980	-		DZA65_RS21425	0.80	+1.3
4,633,980	-		DZA65_RS21425	0.80	+2.3
4,633,987	+		DZA65_RS21425	0.80	-2.5
4,633,987	+		DZA65_RS21425	0.80	+0.6
4,633,988	-		DZA65_RS21425	0.81	+0.8
4,634,005	+		DZA65_RS21425	0.81	-1.0
4,634,005	+		DZA65_RS21425	0.81	+0.6
4,634,017	+		DZA65_RS21425	0.82	+0.0
4,634,018	-		DZA65_RS21425	0.82	+0.2
4,634,050	+		DZA65_RS21425	0.84	-0.2
4,634,050	+		DZA65_RS21425	0.84	-0.6
4,634,050	+		DZA65_RS21425	0.84	-0.5
4,634,051	-		DZA65_RS21425	0.84	-0.1
4,634,051	-		DZA65_RS21425	0.84	-0.7
4,634,074	+		DZA65_RS21425	0.85	+0.2
4,634,074	+		DZA65_RS21425	0.85	-0.3
4,634,074	+		DZA65_RS21425	0.85	+0.0
4,634,074	+		DZA65_RS21425	0.85	-0.6
4,634,074	+		DZA65_RS21425	0.85	-1.1
4,634,074	+		DZA65_RS21425	0.85	-0.2
4,634,074	+				-1.0
4,634,074	+		DZA65_RS21425	0.85	-0.2
4,634,074	+		DZA65_RS21425	0.85	+1.0
4,634,075	-		DZA65_RS21425	0.85	+0.7
4,634,075	-		DZA65_RS21425	0.85	-0.2
4,634,075	-		DZA65_RS21425	0.85	-0.3
4,634,075	-		DZA65_RS21425	0.85	+0.4
4,634,075	-		DZA65_RS21425	0.85	+0.0
4,634,076	+		DZA65_RS21425	0.85	+0.0
4,634,076	+		DZA65_RS21425	0.85	+0.5
4,634,076	+		DZA65_RS21425	0.85	+0.5
4,634,076	+		DZA65_RS21425	0.85	+0.5
4,634,077	-		DZA65_RS21425	0.85	+0.4
4,634,077	-		DZA65_RS21425	0.85	-0.8
4,634,077	-		DZA65_RS21425	0.85	+1.4
4,634,077	-		DZA65_RS21425	0.85	+0.9
4,634,077	-		DZA65_RS21425	0.85	+0.6
4,634,077	-		DZA65_RS21425	0.85	-1.8
4,634,176	+				+0.3
4,634,176	+				+0.9
4,634,176	+				+0.4
4,634,176	+				-0.6
4,634,176	+				-2.6
4,634,177	-				-0.2
4,634,177	-				-0.3
4,634,197	+				+0.0
4,634,197	+				-2.0
4,634,197	+				+1.0
4,634,197	+				-0.6
4,634,197	+				-0.1
4,634,198	-				+0.4
4,634,198	-				+0.2
4,634,198	-				-2.0
4,634,198	-				-0.5
4,634,198	-				-1.2
4,634,198	-				+0.3
4,634,198	-				+0.0
4,634,198	-				+0.2
4,634,198	-				-1.9
4,634,210	+				-1.6
4,634,210	+				+0.1
4,634,263	+				+0.2
4,634,263	+				-0.7
4,634,263	+				+0.6
4,634,264	-				+0.0
4,634,264	-				-0.2
4,634,266	+				-0.6
4,634,266	+				-0.2
4,634,266	+				-0.7
4,634,266	+				+2.6
4,634,266	+				+0.3
4,634,266	+				-0.4
4,634,266	+				+0.6
4,634,266	+				-0.3
4,634,267	-				-2.5
4,634,267	-				+0.0
4,634,267	-				+0.9
4,634,267	-				-0.7
4,634,267	-				+0.7
4,634,267	-				+3.3
4,634,267	-				+1.0
4,634,318	+				+0.0
4,634,318	+				+0.5
4,634,319	-				-1.2
4,634,340	-				+0.7
4,634,347	+				-1.0
4,634,348	-				-0.2
4,634,350	+				+0.8
4,634,350	+				-1.1
4,634,350	+				-0.3
4,634,350	+				+0.2
4,634,351	-				-0.3
4,634,351	-				+1.3
4,634,351	-				-1.5
4,634,351	-				+0.1
4,634,360	+				-2.0
4,634,360	+				-0.5
4,634,360	+				-2.0
4,634,360	+				+0.4
4,634,360	+				-1.1
4,634,360	+				-0.6
4,634,360	+				+0.7
4,634,360	+				+0.3
4,634,360	+				+0.6
4,634,360	+				+1.0
4,634,360	+				-1.2
4,634,361	-				-0.4
4,634,361	-				-1.8
4,634,361	-				-0.8
4,634,361	-				-0.6
4,634,361	-				+0.3
4,634,361	-				+0.7
4,634,361	-				-1.3
4,634,361	-				+1.5
4,634,361	-				+1.1
4,634,361	-				-0.7
4,634,409	+				+0.2
4,634,441	-				-1.8
4,634,529	-				-2.0
4,634,529	-				+0.9
4,634,625	+				+0.0
4,634,625	+				+0.5
4,634,625	+				-0.5
4,634,625	+				-0.4
4,634,625	+				+0.1
4,634,625	+				+1.1
4,634,625	+				+0.1
4,634,625	+				-0.3
4,634,625	+				+0.9
4,634,626	-				-0.2
4,634,626	-				-0.9
4,634,626	-				-1.0
4,634,626	-				-0.4
4,634,626	-				-0.4
4,634,626	-				+1.0
4,634,626	-				-1.3
4,634,626	-				-0.8
4,634,626	-				+1.0
4,634,626	-				-1.6
4,634,677	+				-0.1
4,634,710	+				-1.8
4,634,711	-				+0.2
4,634,711	-				+0.0
4,634,730	+				-1.1
4,634,730	+				-0.3
4,634,730	+				+0.4
4,634,730	+				+1.3
4,634,730	+				-1.2
4,634,730	+				-0.7
4,634,730	+				+0.8
4,634,730	+				-1.8
4,634,730	+				+2.0
4,634,730	+				+0.0
4,634,730	+				-1.0
4,634,731	-				+0.2
4,634,731	-				-1.9
4,634,731	-				+0.2
4,634,731	-				+1.0
4,634,731	-				+1.6
4,634,731	-				+1.2
4,634,731	-				-2.0
4,634,731	-				-1.3
4,634,731	-				+1.2
4,634,731	-				+1.6
4,634,742	+				-1.2
4,634,742	+				-0.7
4,634,742	+				+1.3
4,634,742	+				+0.2
4,634,742	+				-0.9
4,634,743	-				+0.1
4,634,743	-				+1.3
4,634,743	-				+0.1
4,634,751	+				+0.2
4,634,751	+				+0.7
4,634,751	+				-1.2
4,634,751	+				-1.2
4,634,751	+				+0.0
4,634,751	+				-0.2
4,634,752	-				+1.9
4,634,752	-				-0.2
4,634,812	+				-0.4
4,634,813	-				-1.0
4,634,813	-				+0.0
4,634,959	+		DZA65_RS21430	0.16	+0.8
4,634,959	+		DZA65_RS21430	0.16	+2.7
4,634,959	+		DZA65_RS21430	0.16	+0.1
4,634,960	-		DZA65_RS21430	0.16	+1.5
4,634,967	+		DZA65_RS21430	0.17	+1.0
4,634,967	+		DZA65_RS21430	0.17	+0.6
4,634,967	+		DZA65_RS21430	0.17	+0.0
4,634,967	+		DZA65_RS21430	0.17	-0.6
4,634,967	+		DZA65_RS21430	0.17	-0.8
4,634,968	-		DZA65_RS21430	0.17	-2.3
4,634,968	-		DZA65_RS21430	0.17	-0.7
4,635,095	+		DZA65_RS21430	0.28	-1.8
4,635,095	+		DZA65_RS21430	0.28	+0.6
4,635,096	-		DZA65_RS21430	0.28	-0.4
4,635,096	-		DZA65_RS21430	0.28	+1.7
4,635,096	-		DZA65_RS21430	0.28	+0.0
4,635,096	-		DZA65_RS21430	0.28	-1.3
4,635,096	-		DZA65_RS21430	0.28	-0.2
4,635,096	-		DZA65_RS21430	0.28	+0.6
4,635,109	+		DZA65_RS21430	0.30	-1.2
4,635,109	+		DZA65_RS21430	0.30	-0.1
4,635,109	+		DZA65_RS21430	0.30	-1.0
4,635,110	-		DZA65_RS21430	0.30	-0.8
4,635,110	-		DZA65_RS21430	0.30	-0.2
4,635,110	-		DZA65_RS21430	0.30	-0.6
4,635,151	+		DZA65_RS21430	0.33	-0.4
4,635,152	-		DZA65_RS21430	0.34	+1.0
4,635,152	-		DZA65_RS21430	0.34	-0.6
4,635,152	-		DZA65_RS21430	0.34	-0.2
4,635,152	-		DZA65_RS21430	0.34	-1.3
4,635,231	-		DZA65_RS21430	0.41	+1.6
4,635,280	+		DZA65_RS21430	0.45	+0.2
4,635,280	+		DZA65_RS21430	0.45	+0.4
4,635,280	+		DZA65_RS21430	0.45	-0.5
4,635,280	+		DZA65_RS21430	0.45	-0.6
4,635,280	+		DZA65_RS21430	0.45	-1.6
4,635,280	+		DZA65_RS21430	0.45	-1.0
4,635,281	-		DZA65_RS21430	0.45	+1.4
4,635,281	-		DZA65_RS21430	0.45	-0.6
4,635,322	+		DZA65_RS21430	0.49	-0.9
4,635,322	+		DZA65_RS21430	0.49	+1.0
4,635,323	-		DZA65_RS21430	0.49	+0.0
4,635,323	-		DZA65_RS21430	0.49	+0.8
4,635,323	-		DZA65_RS21430	0.49	+1.7
4,635,433	+		DZA65_RS21430	0.59	-0.3
4,635,433	+		DZA65_RS21430	0.59	-1.0
4,635,434	-		DZA65_RS21430	0.59	-0.0
4,635,529	+		DZA65_RS21430	0.68	-0.6
4,635,529	+		DZA65_RS21430	0.68	-3.1
4,635,529	+		DZA65_RS21430	0.68	+1.3
4,635,529	+		DZA65_RS21430	0.68	+0.7
4,635,529	+		DZA65_RS21430	0.68	-1.1
4,635,529	+		DZA65_RS21430	0.68	+1.0
4,635,530	-		DZA65_RS21430	0.68	-1.3
4,635,530	-		DZA65_RS21430	0.68	+0.5
4,635,530	-		DZA65_RS21430	0.68	+0.6
4,635,534	+		DZA65_RS21430	0.68	-0.7
4,635,534	+		DZA65_RS21430	0.68	+0.0
4,635,534	+		DZA65_RS21430	0.68	+0.8
4,635,534	+		DZA65_RS21430	0.68	-0.6
4,635,535	-		DZA65_RS21430	0.68	+1.7
4,635,535	-		DZA65_RS21430	0.68	-1.3
4,635,535	-		DZA65_RS21430	0.68	-1.8
4,635,555	+		DZA65_RS21430	0.70	-1.0
4,635,555	+		DZA65_RS21430	0.70	-0.4
4,635,555	+		DZA65_RS21430	0.70	+0.0
4,635,556	-		DZA65_RS21430	0.70	+0.0
4,635,556	-		DZA65_RS21430	0.70	-0.8
4,635,556	-		DZA65_RS21430	0.70	+0.5
4,635,568	-		DZA65_RS21430	0.71	-0.2
4,635,568	-		DZA65_RS21430	0.71	+0.0
4,635,591	+		DZA65_RS21430	0.73	+2.2
4,635,600	+		DZA65_RS21430	0.74	-0.4
4,635,600	+		DZA65_RS21430	0.74	+0.2
4,635,601	-		DZA65_RS21430	0.74	+0.8
4,635,611	+		DZA65_RS21430	0.75	-1.8
4,635,611	+		DZA65_RS21430	0.75	+1.0
4,635,611	+		DZA65_RS21430	0.75	+0.1
4,635,612	-		DZA65_RS21430	0.75	+1.0
4,635,612	-		DZA65_RS21430	0.75	-1.0
4,635,653	-		DZA65_RS21430	0.79	-0.3
4,635,710	+		DZA65_RS21430	0.84	-2.2
4,635,710	+		DZA65_RS21430	0.84	+0.4
4,635,711	-		DZA65_RS21430	0.84	-3.2
4,635,711	-		DZA65_RS21430	0.84	-0.4
4,635,711	-		DZA65_RS21430	0.84	-1.8
4,635,711	-		DZA65_RS21430	0.84	-2.3
4,635,711	-		DZA65_RS21430	0.84	+2.2
4,635,711	-		DZA65_RS21430	0.84	-0.0
4,635,742	+		DZA65_RS21430	0.87	+1.0
4,635,742	+		DZA65_RS21430	0.87	-0.5
4,635,742	+		DZA65_RS21430	0.87	-0.8
4,635,742	+		DZA65_RS21430	0.87	+0.2
4,635,742	+		DZA65_RS21430	0.87	+1.6
4,635,742	+		DZA65_RS21430	0.87	-1.4
4,635,742	+		DZA65_RS21430	0.87	-0.3
4,635,742	+		DZA65_RS21430	0.87	-0.4
4,635,742	+		DZA65_RS21430	0.87	-2.2
4,635,742	+		DZA65_RS21430	0.87	-0.8
4,635,742	+		DZA65_RS21430	0.87	+0.4
4,635,742	+		DZA65_RS21430	0.87	+1.0
4,635,743	-		DZA65_RS21430	0.87	-0.6
4,635,743	-		DZA65_RS21430	0.87	-0.2
4,635,743	-		DZA65_RS21430	0.87	+0.0
4,635,743	-		DZA65_RS21430	0.87	-2.8
4,635,743	-				+3.0
4,635,743	-		DZA65_RS21430	0.87	-0.8
4,635,743	-		DZA65_RS21430	0.87	-0.7
4,635,838	+				-2.2
4,635,839	-				+0.6
4,635,839	-				-2.2
4,635,839	-				-0.8
4,635,839	-				-0.7
4,635,839	-				-0.3
4,635,840	+				+0.9
4,635,840	+				-1.1
4,635,840	+				+0.5
4,635,840	+				-0.2
4,635,840	+				-0.1
4,635,840	+				-1.4
4,635,840	+				+1.2
4,635,840	+				+0.3
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