Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19885

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,300,245	+				-1.4
4,300,246	-				-2.1
4,300,246	-				+1.2
4,300,246	-				-1.4
4,300,246	-				-0.7
4,300,246	-				+0.9
4,300,246	-				+0.1
4,300,246	-				+0.6
4,300,261	+				+0.2
4,300,261	+				-0.7
4,300,261	+				-0.1
4,300,262	-				-1.4
4,300,262	-				-0.1
4,300,290	+				-1.9
4,300,290	+				+0.2
4,300,290	+				+0.6
4,300,330	+				+0.1
4,300,335	-				+0.2
4,300,372	+				-0.9
4,300,379	+				-0.1
4,300,380	-				-0.7
4,300,394	+				+1.2
4,300,394	+				-0.3
4,300,394	+				-2.7
4,300,394	+				+0.9
4,300,394	+				-0.5
4,300,394	+				+0.2
4,300,394	+				-0.5
4,300,394	+				+0.9
4,300,394	+				+1.6
4,300,394	+				+0.3
4,300,394	+				-0.0
4,300,394	+				-1.4
4,300,394	+				-1.1
4,300,394	+				+0.0
4,300,395	-				-0.3
4,300,395	-				+0.8
4,300,395	-				-0.5
4,300,395	-				-2.0
4,300,395	-				-0.7
4,300,395	-				-0.1
4,300,395	-				+0.8
4,300,395	-				+1.3
4,300,395	-				+0.0
4,300,395	-				-2.1
4,300,458	-		DZA65_RS19880	0.15	+0.5
4,300,461	-		DZA65_RS19880	0.15	-0.8
4,300,461	-		DZA65_RS19880	0.15	+0.9
4,300,461	-		DZA65_RS19880	0.15	-1.7
4,300,461	-		DZA65_RS19880	0.15	-0.0
4,300,461	-		DZA65_RS19880	0.15	-0.7
4,300,461	-		DZA65_RS19880	0.15	-0.5
4,300,506	-		DZA65_RS19880	0.25	+1.2
4,300,706	-		DZA65_RS19880	0.67	+0.1
4,300,706	-		DZA65_RS19880	0.67	+0.6
4,300,714	+		DZA65_RS19880	0.69	-0.1
4,300,714	+		DZA65_RS19880	0.69	+1.6
4,300,715	-		DZA65_RS19880	0.69	-0.7
4,300,715	-		DZA65_RS19880	0.69	-0.1
4,300,715	-		DZA65_RS19880	0.69	+0.6
4,300,748	-		DZA65_RS19880	0.76	+1.6
4,300,777	+		DZA65_RS19880	0.82	+1.9
4,300,828	-				+0.4
4,300,842	-				-0.2
4,300,887	-				-0.2
4,300,939	+				-1.2
4,300,995	+				-1.1
4,300,995	+				-1.3
4,300,995	+				-0.6
4,300,995	+				-0.8
4,300,995	+				+1.0
4,300,996	-				-0.0
4,300,996	-				-0.5
4,300,996	-				-0.4
4,301,001	+				+0.1
4,301,061	+				+1.0
4,301,061	+				-0.7
4,301,062	-				+0.3
4,301,077	+				+0.6
4,301,079	+				-2.7
4,301,079	+				+1.2
4,301,079	+				-0.6
4,301,079	+				-0.1
4,301,080	-				+0.5
4,301,080	-				-0.3
4,301,122	+				-1.0
4,301,122	+				+0.7
4,301,122	+				-0.3
4,301,122	+				-1.4
4,301,122	+				+0.3
4,301,122	+				-0.4
4,301,123	-				-0.5
4,301,188	+				+0.1
4,301,188	+				+0.1
4,301,188	+				-2.4
4,301,188	+				+2.1
4,301,189	-				-1.6
4,301,189	-				-1.4
4,301,189	-				-1.4
4,301,191	+				-1.1
4,301,191	+				+1.3
4,301,191	+				+0.3
4,301,191	+				+1.3
4,301,191	+				+0.9
4,301,191	+				-1.7
4,301,191	+				+0.5
4,301,191	+				+0.4
4,301,191	+				-0.4
4,301,192	-				+0.9
4,301,192	-				+2.0
4,301,192	-				-0.5
4,301,192	-				-1.3
4,301,192	-				-1.1
4,301,192	-				-0.3
4,301,192	-				-1.1
4,301,192	-				+1.4
4,301,192	-				+0.4
4,301,192	-				+0.3
4,301,192	-				+0.2
4,301,241	+		DZA65_RS19885	0.11	+1.9
4,301,241	+		DZA65_RS19885	0.11	-1.0
4,301,241	+		DZA65_RS19885	0.11	-1.1
4,301,241	+		DZA65_RS19885	0.11	-1.4
4,301,242	-		DZA65_RS19885	0.11	+0.9
4,301,242	-		DZA65_RS19885	0.11	-0.1
4,301,402	+		DZA65_RS19885	0.21	+0.0
4,301,402	+		DZA65_RS19885	0.21	-0.1
4,301,402	+		DZA65_RS19885	0.21	-1.4
4,301,402	+		DZA65_RS19885	0.21	-2.4
4,301,402	+		DZA65_RS19885	0.21	+0.1
4,301,402	+		DZA65_RS19885	0.21	+0.4
4,301,402	+		DZA65_RS19885	0.21	+0.5
4,301,402	+		DZA65_RS19885	0.21	+1.7
4,301,402	+		DZA65_RS19885	0.21	-0.6
4,301,402	+		DZA65_RS19885	0.21	-0.6
4,301,402	+		DZA65_RS19885	0.21	+0.9
4,301,402	+		DZA65_RS19885	0.21	+0.3
4,301,402	+		DZA65_RS19885	0.21	+0.2
4,301,402	+		DZA65_RS19885	0.21	+2.4
4,301,402	+		DZA65_RS19885	0.21	-0.4
4,301,402	+		DZA65_RS19885	0.21	-1.4
4,301,402	+		DZA65_RS19885	0.21	+0.5
4,301,402	+		DZA65_RS19885	0.21	-0.0
4,301,403	-		DZA65_RS19885	0.21	+0.4
4,301,403	-		DZA65_RS19885	0.21	+1.5
4,301,403	-		DZA65_RS19885	0.21	+0.2
4,301,403	-		DZA65_RS19885	0.21	-1.3
4,301,403	-		DZA65_RS19885	0.21	-0.3
4,301,403	-		DZA65_RS19885	0.21	+1.3
4,301,403	-		DZA65_RS19885	0.21	-0.3
4,301,403	-		DZA65_RS19885	0.21	+0.2
4,301,403	-		DZA65_RS19885	0.21	+0.3
4,301,403	-		DZA65_RS19885	0.21	+1.9
4,301,403	-		DZA65_RS19885	0.21	+0.5
4,301,403	-		DZA65_RS19885	0.21	+0.0
4,301,403	-		DZA65_RS19885	0.21	+0.0
4,301,403	-		DZA65_RS19885	0.21	-0.4
4,301,403	-		DZA65_RS19885	0.21	+0.3
4,301,519	+		DZA65_RS19885	0.29	-0.1
4,301,519	+		DZA65_RS19885	0.29	-1.9
4,301,520	-		DZA65_RS19885	0.29	+0.7
4,301,520	-		DZA65_RS19885	0.29	+1.4
4,301,644	+		DZA65_RS19885	0.37	-0.1
4,301,700	-		DZA65_RS19885	0.41	+1.5
4,301,720	+		DZA65_RS19885	0.42	-0.1
4,301,720	+		DZA65_RS19885	0.42	-2.2
4,301,720	+		DZA65_RS19885	0.42	+1.6
4,301,720	+		DZA65_RS19885	0.42	-0.1
4,301,721	-		DZA65_RS19885	0.42	+3.4
4,301,721	-		DZA65_RS19885	0.42	+0.5
4,301,721	-		DZA65_RS19885	0.42	-0.2
4,301,721	-		DZA65_RS19885	0.42	+0.9
4,301,721	-		DZA65_RS19885	0.42	-1.6
4,301,721	-		DZA65_RS19885	0.42	-1.5
4,301,872	+		DZA65_RS19885	0.52	+0.5
4,301,963	+		DZA65_RS19885	0.58	+0.6
4,301,963	+		DZA65_RS19885	0.58	-1.4
4,301,964	-		DZA65_RS19885	0.58	-1.3
4,301,996	+		DZA65_RS19885	0.60	+0.3
4,301,996	+		DZA65_RS19885	0.60	+0.8
4,301,997	-		DZA65_RS19885	0.60	-0.9
4,302,065	+		DZA65_RS19885	0.65	+0.0
4,302,215	+		DZA65_RS19885	0.75	-1.4
4,302,215	+		DZA65_RS19885	0.75	-1.7
4,302,215	+		DZA65_RS19885	0.75	+1.1
4,302,215	+		DZA65_RS19885	0.75	-1.3
4,302,215	+		DZA65_RS19885	0.75	+0.6
4,302,215	+		DZA65_RS19885	0.75	-0.1
4,302,215	+		DZA65_RS19885	0.75	+1.2
4,302,215	+		DZA65_RS19885	0.75	-0.6
4,302,215	+		DZA65_RS19885	0.75	+0.6
4,302,216	-		DZA65_RS19885	0.75	+0.5
4,302,216	-		DZA65_RS19885	0.75	+0.6
4,302,216	-		DZA65_RS19885	0.75	+0.6
4,302,216	-		DZA65_RS19885	0.75	-1.2
4,302,216	-		DZA65_RS19885	0.75	-0.7
4,302,216	-		DZA65_RS19885	0.75	+1.7
4,302,216	-		DZA65_RS19885	0.75	-0.7
4,302,216	-		DZA65_RS19885	0.75	+0.3
4,302,216	-		DZA65_RS19885	0.75	+0.8
4,302,216	-		DZA65_RS19885	0.75	+0.9
4,302,216	-		DZA65_RS19885	0.75	+0.0
4,302,216	-		DZA65_RS19885	0.75	-0.2
4,302,216	-		DZA65_RS19885	0.75	+0.9
4,302,216	-		DZA65_RS19885	0.75	-0.5
4,302,216	-		DZA65_RS19885	0.75	-0.9
4,302,216	-		DZA65_RS19885	0.75	-0.7
4,302,216	-		DZA65_RS19885	0.75	+1.8
4,302,217	+		DZA65_RS19885	0.75	+1.5
4,302,217	+		DZA65_RS19885	0.75	-0.5
4,302,217	+		DZA65_RS19885	0.75	+0.9
4,302,217	+		DZA65_RS19885	0.75	+1.5
4,302,217	+		DZA65_RS19885	0.75	+1.5
4,302,217	+		DZA65_RS19885	0.75	-0.2
4,302,217	+		DZA65_RS19885	0.75	-2.7
4,302,217	+		DZA65_RS19885	0.75	+0.4
4,302,217	+		DZA65_RS19885	0.75	+0.4
4,302,217	+		DZA65_RS19885	0.75	+0.6
4,302,217	+		DZA65_RS19885	0.75	+0.7
4,302,217	+		DZA65_RS19885	0.75	+0.5
4,302,217	+		DZA65_RS19885	0.75	-0.6
4,302,217	+		DZA65_RS19885	0.75	-0.8
4,302,217	+		DZA65_RS19885	0.75	-0.4
4,302,217	+		DZA65_RS19885	0.75	+0.2
4,302,217	+		DZA65_RS19885	0.75	+0.3
4,302,217	+		DZA65_RS19885	0.75	+0.2
4,302,217	+		DZA65_RS19885	0.75	-0.8
4,302,217	+		DZA65_RS19885	0.75	-0.3
4,302,217	+		DZA65_RS19885	0.75	+0.8
4,302,217	+		DZA65_RS19885	0.75	+0.5
4,302,217	+		DZA65_RS19885	0.75	-0.7
4,302,217	+		DZA65_RS19885	0.75	+0.1
4,302,217	+		DZA65_RS19885	0.75	+0.3
4,302,218	-		DZA65_RS19885	0.75	+0.2
4,302,218	-		DZA65_RS19885	0.75	-0.9
4,302,218	-		DZA65_RS19885	0.75	-2.1
4,302,218	-		DZA65_RS19885	0.75	+0.3
4,302,218	-		DZA65_RS19885	0.75	-0.1
4,302,218	-		DZA65_RS19885	0.75	-0.7
4,302,218	-		DZA65_RS19885	0.75	-3.3
4,302,218	-		DZA65_RS19885	0.75	-1.1
4,302,218	-		DZA65_RS19885	0.75	-1.3
4,302,218	-		DZA65_RS19885	0.75	-0.3
4,302,218	-		DZA65_RS19885	0.75	+0.1
4,302,218	-		DZA65_RS19885	0.75	-1.1
4,302,218	-		DZA65_RS19885	0.75	+0.1
4,302,218	-		DZA65_RS19885	0.75	+0.9
4,302,218	-		DZA65_RS19885	0.75	-1.7
4,302,218	-		DZA65_RS19885	0.75	+0.4
4,302,218	-		DZA65_RS19885	0.75	-1.7
4,302,218	-		DZA65_RS19885	0.75	-0.1
4,302,218	-		DZA65_RS19885	0.75	+0.3
4,302,227	-		DZA65_RS19885	0.76	-0.5
4,302,256	+		DZA65_RS19885	0.77	-0.6
4,302,257	-		DZA65_RS19885	0.77	-1.3
4,302,257	-		DZA65_RS19885	0.77	-0.1
4,302,257	-		DZA65_RS19885	0.77	-1.4
4,302,489	+				+0.3
4,302,489	+				+2.9
4,302,489	+				-0.1
4,302,490	-				+0.9
4,302,497	-				+0.4
4,302,644	+				+0.2
4,302,680	+				-1.0
4,302,680	+				-0.4
4,302,680	+				-0.1
4,302,681	-				+1.3
4,302,681	-				-0.1
4,302,803	+				-1.7
4,302,803	+				-0.7
4,302,803	+				+0.2
4,302,803	+				+0.2
4,302,804	-				+0.7
4,302,804	-				+1.9
4,302,828	+				+0.4
4,302,828	+				+0.7
4,302,828	+				-0.3
4,302,829	-				+0.6
4,302,829	-				+1.4
4,302,829	-				-1.0
4,302,915	+				-0.2
4,302,915	+				-0.3
4,302,915	+				-1.4
4,302,916	-				-0.1
4,302,916	-				+0.9
4,302,940	+				+2.1
4,302,940	+				+0.2
4,302,941	-				+0.8
4,303,121	+		DZA65_RS19890	0.13	-0.5
4,303,122	-		DZA65_RS19890	0.13	+0.2
4,303,122	-		DZA65_RS19890	0.13	+0.9
4,303,148	+		DZA65_RS19890	0.14	+0.7
4,303,148	+		DZA65_RS19890	0.14	-1.0
4,303,149	-		DZA65_RS19890	0.14	-0.1
4,303,149	-		DZA65_RS19890	0.14	+0.2
4,303,149	-				-0.1
4,303,149	-		DZA65_RS19890	0.14	+0.5
4,303,160	+		DZA65_RS19890	0.15	-0.2
4,303,160	+		DZA65_RS19890	0.15	+0.1
4,303,171	+		DZA65_RS19890	0.16	+1.6
4,303,171	+		DZA65_RS19890	0.16	+0.6
4,303,402	+		DZA65_RS19890	0.32	+1.3
4,303,402	+		DZA65_RS19890	0.32	+0.1
4,303,402	+		DZA65_RS19890	0.32	+0.7
4,303,402	+		DZA65_RS19890	0.32	-0.3
4,303,403	-		DZA65_RS19890	0.32	-1.1
4,303,403	-		DZA65_RS19890	0.32	-0.2
4,303,403	-		DZA65_RS19890	0.32	-0.3
4,303,403	-		DZA65_RS19890	0.32	+0.2
4,303,403	-		DZA65_RS19890	0.32	-0.1
4,303,403	-		DZA65_RS19890	0.32	+1.0
4,303,403	-		DZA65_RS19890	0.32	+1.2
4,303,403	-		DZA65_RS19890	0.32	-0.1
4,303,424	-		DZA65_RS19890	0.33	+0.0
4,303,446	+		DZA65_RS19890	0.35	+1.1
4,303,446	+		DZA65_RS19890	0.35	-0.6
4,303,446	+		DZA65_RS19890	0.35	-1.2
4,303,446	+		DZA65_RS19890	0.35	-0.9
4,303,447	-		DZA65_RS19890	0.35	-1.1
4,303,447	-		DZA65_RS19890	0.35	+0.0
4,303,447	-		DZA65_RS19890	0.35	+0.2
4,303,456	+		DZA65_RS19890	0.36	-0.5
4,303,457	-		DZA65_RS19890	0.36	-0.1
4,303,457	-		DZA65_RS19890	0.36	+1.2
4,303,489	+		DZA65_RS19890	0.38	-2.3
4,303,489	+		DZA65_RS19890	0.38	+0.9
4,303,489	+		DZA65_RS19890	0.38	-1.3
4,303,489	+		DZA65_RS19890	0.38	+0.0
4,303,489	+		DZA65_RS19890	0.38	-1.7
4,303,489	+		DZA65_RS19890	0.38	-1.1
4,303,489	+		DZA65_RS19890	0.38	+0.3
4,303,489	+		DZA65_RS19890	0.38	+0.4
4,303,489	+		DZA65_RS19890	0.38	+0.6
4,303,489	+		DZA65_RS19890	0.38	+0.2
4,303,489	+		DZA65_RS19890	0.38	-0.7
4,303,489	+		DZA65_RS19890	0.38	-0.7
4,303,489	+		DZA65_RS19890	0.38	+0.3
4,303,489	+		DZA65_RS19890	0.38	-0.1
4,303,489	+		DZA65_RS19890	0.38	+0.4
4,303,489	+		DZA65_RS19890	0.38	+1.0
4,303,489	+		DZA65_RS19890	0.38	-0.3
4,303,489	+		DZA65_RS19890	0.38	+0.6
4,303,489	+		DZA65_RS19890	0.38	+0.6
4,303,489	+		DZA65_RS19890	0.38	+0.1
4,303,489	+		DZA65_RS19890	0.38	-1.2
4,303,490	-		DZA65_RS19890	0.38	-0.8
4,303,490	-		DZA65_RS19890	0.38	-1.1
4,303,490	-		DZA65_RS19890	0.38	-1.1
4,303,490	-		DZA65_RS19890	0.38	-0.4
4,303,490	-		DZA65_RS19890	0.38	-0.7
4,303,490	-		DZA65_RS19890	0.38	+0.2
4,303,490	-		DZA65_RS19890	0.38	+0.7
4,303,490	-		DZA65_RS19890	0.38	+1.6
4,303,490	-		DZA65_RS19890	0.38	+0.8
4,303,490	-		DZA65_RS19890	0.38	-2.1
4,303,490	-		DZA65_RS19890	0.38	-1.2
4,303,490	-		DZA65_RS19890	0.38	-0.6
4,303,576	+		DZA65_RS19890	0.44	+0.5
4,303,576	+		DZA65_RS19890	0.44	+0.2
4,303,576	+		DZA65_RS19890	0.44	+0.1
4,303,576	+		DZA65_RS19890	0.44	-0.8
4,303,576	+		DZA65_RS19890	0.44	-0.3
4,303,576	+		DZA65_RS19890	0.44	-0.4
4,303,576	+				+0.9
4,303,576	+		DZA65_RS19890	0.44	-0.4
4,303,577	-		DZA65_RS19890	0.44	+0.2
4,303,577	-		DZA65_RS19890	0.44	-0.4
4,303,577	-		DZA65_RS19890	0.44	-0.5
4,303,577	-		DZA65_RS19890	0.44	+0.2
4,303,577	-		DZA65_RS19890	0.44	+0.0
4,303,577	-		DZA65_RS19890	0.44	+2.5
4,303,577	-		DZA65_RS19890	0.44	+0.1
4,303,577	-		DZA65_RS19890	0.44	-0.1
4,303,577	-		DZA65_RS19890	0.44	-0.0
4,303,577	-		DZA65_RS19890	0.44	-2.0
4,303,577	-		DZA65_RS19890	0.44	+0.5
4,303,577	-		DZA65_RS19890	0.44	-0.3
4,303,577	-		DZA65_RS19890	0.44	-0.7
4,303,577	-		DZA65_RS19890	0.44	-1.4