Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19485

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,215,234	+				-0.0
4,215,234	+				-2.6
4,215,234	+				-1.7
4,215,235	-				-2.9
4,215,235	-				-2.7
4,215,235	-				-1.2
4,215,289	+				+1.6
4,215,289	+				-1.5
4,215,289	+				-2.5
4,215,290	-				-0.4
4,215,290	-				-2.9
4,215,290	-				-1.5
4,215,318	+				-0.2
4,215,319	-				-1.4
4,215,595	-		DZA65_RS19480	0.37	-1.3
4,215,759	+		DZA65_RS19480	0.55	+1.4
4,215,759	+		DZA65_RS19480	0.55	-1.5
4,215,760	-		DZA65_RS19480	0.55	-0.7
4,216,164	+				-2.3
4,216,164	+				-1.2
4,216,164	+				-1.2
4,216,164	+				-0.6
4,216,164	+				-1.5
4,216,165	-				-0.7
4,216,207	-				+0.3
4,216,240	+				-1.4
4,216,240	+				-2.9
4,216,241	-				+0.1
4,216,289	+				-0.7
4,216,289	+				+0.6
4,216,290	-				-2.7
4,216,290	-				+2.5
4,216,292	+				-0.6
4,216,335	+				-2.3
4,216,336	-				-0.1
4,216,336	-				-0.7
4,216,336	-				+0.1
4,216,383	+				-0.4
4,216,383	+				+0.6
4,216,384	-				-0.9
4,216,406	+				-0.7
4,216,406	+				-1.0
4,216,419	+				+0.3
4,216,420	-				-0.6
4,216,511	+		DZA65_RS19485	0.13	-1.8
4,216,511	+		DZA65_RS19485	0.13	+1.0
4,216,562	+		DZA65_RS19485	0.16	-1.2
4,216,562	+		DZA65_RS19485	0.16	-1.2
4,216,711	-		DZA65_RS19485	0.22	-0.7
4,216,734	+		DZA65_RS19485	0.23	-1.2
4,216,734	+		DZA65_RS19485	0.23	-0.7
4,216,734	+		DZA65_RS19485	0.23	-1.6
4,216,735	-		DZA65_RS19485	0.23	+1.1
4,216,823	+		DZA65_RS19485	0.26	-0.3
4,216,823	+		DZA65_RS19485	0.26	-1.1
4,216,823	+		DZA65_RS19485	0.26	+0.8
4,216,823	+		DZA65_RS19485	0.26	-0.3
4,216,824	-		DZA65_RS19485	0.26	-0.7
4,216,833	+		DZA65_RS19485	0.27	+0.3
4,216,833	+		DZA65_RS19485	0.27	-0.6
4,216,833	+		DZA65_RS19485	0.27	-1.2
4,216,833	+		DZA65_RS19485	0.27	-1.2
4,216,834	-		DZA65_RS19485	0.27	+0.8
4,216,871	+		DZA65_RS19485	0.28	-1.2
4,216,871	+		DZA65_RS19485	0.28	-0.2
4,216,874	+				-0.5
4,216,874	+		DZA65_RS19485	0.28	-0.9
4,216,874	+		DZA65_RS19485	0.28	-1.3
4,216,874	+		DZA65_RS19485	0.28	-0.2
4,216,874	+		DZA65_RS19485	0.28	-1.7
4,216,874	+		DZA65_RS19485	0.28	-0.1
4,216,875	-		DZA65_RS19485	0.28	-1.7
4,216,875	-		DZA65_RS19485	0.28	-0.6
4,216,946	+		DZA65_RS19485	0.31	-0.7
4,216,947	-		DZA65_RS19485	0.31	+1.1
4,216,974	+		DZA65_RS19485	0.32	-2.2
4,216,974	+		DZA65_RS19485	0.32	-2.4
4,216,974	+		DZA65_RS19485	0.32	-0.2
4,216,974	+		DZA65_RS19485	0.32	-4.3
4,216,975	-		DZA65_RS19485	0.32	-0.7
4,217,006	+		DZA65_RS19485	0.34	+0.3
4,217,006	+		DZA65_RS19485	0.34	-2.3
4,217,006	+		DZA65_RS19485	0.34	-0.0
4,217,007	-		DZA65_RS19485	0.34	-0.5
4,217,007	-		DZA65_RS19485	0.34	-1.5
4,217,085	+		DZA65_RS19485	0.37	+2.1
4,217,086	-		DZA65_RS19485	0.37	-1.0
4,217,086	-		DZA65_RS19485	0.37	-0.6
4,217,086	-		DZA65_RS19485	0.37	-0.8
4,217,098	+		DZA65_RS19485	0.37	-2.6
4,217,098	+		DZA65_RS19485	0.37	+1.3
4,217,098	+		DZA65_RS19485	0.37	-1.4
4,217,098	+		DZA65_RS19485	0.37	-0.7
4,217,098	+		DZA65_RS19485	0.37	+0.8
4,217,098	+		DZA65_RS19485	0.37	-1.2
4,217,098	+		DZA65_RS19485	0.37	-2.2
4,217,099	-		DZA65_RS19485	0.37	-2.4
4,217,099	-		DZA65_RS19485	0.37	-0.7
4,217,099	-		DZA65_RS19485	0.37	-1.7
4,217,099	-		DZA65_RS19485	0.37	-1.2
4,217,143	+		DZA65_RS19485	0.39	+0.4
4,217,144	-		DZA65_RS19485	0.39	-2.0
4,217,144	-		DZA65_RS19485	0.39	-0.2
4,217,144	-		DZA65_RS19485	0.39	-1.7
4,217,144	-		DZA65_RS19485	0.39	-1.2
4,217,253	+		DZA65_RS19485	0.44	-0.5
4,217,253	+		DZA65_RS19485	0.44	-1.3
4,217,253	+		DZA65_RS19485	0.44	-0.7
4,217,254	-		DZA65_RS19485	0.44	+1.4
4,217,254	-		DZA65_RS19485	0.44	-1.7
4,217,458	+				-0.7
4,217,459	-		DZA65_RS19485	0.52	-1.9
4,217,479	+		DZA65_RS19485	0.53	-0.2
4,217,479	+		DZA65_RS19485	0.53	+0.4
4,217,479	+		DZA65_RS19485	0.53	-1.1
4,217,501	+		DZA65_RS19485	0.54	-0.3
4,217,502	-		DZA65_RS19485	0.54	-1.7
4,217,570	+		DZA65_RS19485	0.57	-1.6
4,217,665	-		DZA65_RS19485	0.60	+0.1
4,217,862	-		DZA65_RS19485	0.68	-0.4
4,217,862	-		DZA65_RS19485	0.68	-2.0
4,217,885	+		DZA65_RS19485	0.69	-0.4
4,217,939	+		DZA65_RS19485	0.72	-1.0
4,217,939	+		DZA65_RS19485	0.72	-1.5
4,217,939	+		DZA65_RS19485	0.72	-0.7
4,217,939	+		DZA65_RS19485	0.72	-0.2
4,217,939	+		DZA65_RS19485	0.72	+0.4
4,217,939	+		DZA65_RS19485	0.72	-1.0
4,217,939	+		DZA65_RS19485	0.72	-0.7
4,217,939	+		DZA65_RS19485	0.72	-0.2
4,217,939	+		DZA65_RS19485	0.72	-0.7
4,217,939	+		DZA65_RS19485	0.72	+0.4
4,217,939	+		DZA65_RS19485	0.72	-1.0
4,217,940	-		DZA65_RS19485	0.72	-0.0
4,217,940	-		DZA65_RS19485	0.72	+2.1
4,217,940	-		DZA65_RS19485	0.72	-2.4
4,217,940	-		DZA65_RS19485	0.72	-1.2
4,217,940	-		DZA65_RS19485	0.72	-0.2
4,218,118	-		DZA65_RS19485	0.79	-0.2
4,218,118	-		DZA65_RS19485	0.79	-1.3
4,218,118	-		DZA65_RS19485	0.79	-0.7
4,218,138	+		DZA65_RS19485	0.80	+1.3
4,218,159	-		DZA65_RS19485	0.81	-0.8
4,218,226	+		DZA65_RS19485	0.83	-0.2
4,218,227	-		DZA65_RS19485	0.83	-0.9
4,218,227	-		DZA65_RS19485	0.83	-2.3
4,218,270	+		DZA65_RS19485	0.85	-1.9
4,218,270	+		DZA65_RS19485	0.85	+0.8
4,218,271	-		DZA65_RS19485	0.85	+0.4
4,218,271	-		DZA65_RS19485	0.85	-1.9
4,218,447	+				-1.0
4,218,447	+				-1.5
4,218,448	-				-1.5
4,218,448	-				+0.0
4,218,535	-				+0.5
4,218,645	-				-1.2
4,218,645	-				-0.0
4,218,712	+				+0.0
4,218,712	+				-2.9
4,218,712	+				-2.2
4,218,712	+				-1.2
4,218,712	+				+0.2
4,218,712	+				-0.2
4,218,712	+				-0.6
4,218,713	-				-1.5
4,218,713	-				+0.8
4,218,713	-				-2.5
4,218,713	-				-0.5
4,218,713	-				-1.2
4,218,713	-				+0.2
4,218,731	+				-2.0
4,218,731	+				-0.2
4,218,732	-				-0.8
4,218,742	+				+0.3
4,218,743	-				+1.2
4,218,748	+				-2.2
4,218,749	-				+0.1
4,218,749	-				+1.4
4,218,798	+				-0.9
4,218,836	+				-2.1
4,218,837	-				+2.4
4,218,839	+				-0.3
4,218,839	+				-1.5
4,218,839	+				-1.5
4,218,839	+				-0.5
4,218,839	+				-2.1
4,218,840	-				-0.2
4,218,840	-				+0.4
4,218,843	-				-0.3
4,218,891	+				-1.5
4,218,892	-				+1.0
4,218,905	-				+1.1
4,218,913	+				+0.0
4,218,914	-				-1.5
4,218,914	-				+0.1
4,218,916	+				+0.7
4,218,916	+				-2.5
4,218,916	+				-3.3
4,218,916	+				-0.2
4,218,916	+				-2.2
4,218,916	+				-2.5
4,218,917	-				-1.0
4,218,917	-				-1.5
4,218,917	-				+0.5
4,218,917	-				+0.4
4,218,917	-				-0.6
4,218,917	-				-1.6
4,218,917	-				-1.5
4,218,917	-				-1.0
4,218,917	-				+0.8
4,218,917	-				-0.0
4,218,917	-				+1.2
4,218,917	-				+0.4
4,218,937	+				-3.0
4,218,938	-				-0.1
4,218,938	-				-0.7
4,218,963	+				+0.8
4,218,963	+				+0.3
4,218,967	+				+1.8
4,218,967	+				-1.1
4,218,967	+				-2.2
4,218,967	+				-1.2
4,218,967	+				-0.6
4,218,967	+				-0.2
4,218,968	-				+1.1
4,218,968	-				+0.5
4,218,968	-				-2.0
4,218,968	-				+0.7
4,218,968	-				+1.4
4,218,968	-				+0.8
4,218,968	-				-1.0
4,218,973	-				+0.8
4,218,990	+				+0.1
4,218,990	+				+2.6
4,219,123	+				+1.4
4,219,123	+				+0.3
4,219,123	+				+0.5
4,219,124	-				-1.3
4,219,124	-				-2.6
4,219,132	+				-0.3
4,219,132	+				+0.8
4,219,133	-				+0.2
4,219,133	-				+0.1
4,219,133	-				-0.0
4,219,133	-				-0.5
4,219,133	-				-0.7
4,219,133	-				-1.5
4,219,133	-				+0.7
4,219,133	-				-1.5
4,219,314	+				-0.7
4,219,320	+		DZA65_RS19490	0.36	+0.3
4,219,320	+		DZA65_RS19490	0.36	+0.1
4,219,320	+		DZA65_RS19490	0.36	+0.0
4,219,320	+		DZA65_RS19490	0.36	+0.8
4,219,320	+		DZA65_RS19490	0.36	+0.2
4,219,320	+		DZA65_RS19490	0.36	-0.5
4,219,320	+		DZA65_RS19490	0.36	+1.1
4,219,320	+		DZA65_RS19490	0.36	+0.3
4,219,320	+		DZA65_RS19490	0.36	+1.0
4,219,320	+		DZA65_RS19490	0.36	+1.4
4,219,320	+		DZA65_RS19490	0.36	+0.4
4,219,320	+		DZA65_RS19490	0.36	-0.3
4,219,320	+		DZA65_RS19490	0.36	-1.5
4,219,320	+		DZA65_RS19490	0.36	-0.7
4,219,321	-		DZA65_RS19490	0.36	+2.4
4,219,321	-		DZA65_RS19490	0.36	+0.2
4,219,321	-		DZA65_RS19490	0.36	+0.7
4,219,321	-		DZA65_RS19490	0.36	-0.1
4,219,321	-		DZA65_RS19490	0.36	+0.8
4,219,321	-		DZA65_RS19490	0.36	+0.3
4,219,321	-		DZA65_RS19490	0.36	-1.2
4,219,321	-		DZA65_RS19490	0.36	+0.8
4,219,321	-		DZA65_RS19490	0.36	-0.2
4,219,321	-		DZA65_RS19490	0.36	-0.5
4,219,321	-		DZA65_RS19490	0.36	-0.2
4,219,321	-		DZA65_RS19490	0.36	+1.3
4,219,321	-		DZA65_RS19490	0.36	+1.7
4,219,357	-		DZA65_RS19490	0.41	+0.4
4,219,451	-		DZA65_RS19490	0.54	+0.4
4,219,456	+		DZA65_RS19490	0.55	+0.8
4,219,457	-		DZA65_RS19490	0.55	-0.2
4,219,457	-		DZA65_RS19490	0.55	-0.9
4,219,457	-		DZA65_RS19490	0.55	+0.3
4,219,457	-		DZA65_RS19490	0.55	-0.7
4,219,457	-		DZA65_RS19490	0.55	-1.3
4,219,481	+		DZA65_RS19490	0.59	-0.4
4,219,482	-		DZA65_RS19490	0.59	+0.0
4,219,509	+		DZA65_RS19490	0.63	-0.2
4,219,509	+		DZA65_RS19490	0.63	+1.3
4,219,509	+		DZA65_RS19490	0.63	+0.8
4,219,509	+		DZA65_RS19490	0.63	+0.8
4,219,509	+		DZA65_RS19490	0.63	-0.7
4,219,509	+		DZA65_RS19490	0.63	-0.2
4,219,510	-		DZA65_RS19490	0.63	+0.7
4,219,510	-		DZA65_RS19490	0.63	-0.2
4,219,510	-		DZA65_RS19490	0.63	-0.5
4,219,510	-		DZA65_RS19490	0.63	-1.7
4,219,510	-		DZA65_RS19490	0.63	-0.3
4,219,512	+		DZA65_RS19490	0.63	+1.3
4,219,513	-		DZA65_RS19490	0.63	-0.4
4,219,513	-		DZA65_RS19490	0.63	-0.7
4,219,513	-		DZA65_RS19490	0.63	-1.1
4,219,513	-		DZA65_RS19490	0.63	-0.4
4,219,513	-		DZA65_RS19490	0.63	+0.5
4,219,598	+		DZA65_RS19490	0.75	-0.8
4,219,599	-				+0.3
4,219,599	-		DZA65_RS19490	0.75	+1.4
4,219,599	-		DZA65_RS19490	0.75	-0.4
4,219,599	-		DZA65_RS19490	0.75	+1.1
4,219,599	-		DZA65_RS19490	0.75	+0.8