Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19035

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,114,598	+				+1.0
4,114,598	+				+0.8
4,114,598	+				+0.5
4,114,598	+				-1.5
4,114,599	-				-1.6
4,114,599	-				-1.0
4,114,599	-				-0.0
4,114,599	-				+1.4
4,114,606	-				-2.0
4,114,637	+				-1.8
4,114,637	+				+1.2
4,114,637	+				-1.3
4,114,637	+				+0.4
4,114,638	-				-0.1
4,114,638	-				+0.2
4,114,638	-				-1.2
4,114,682	+		DZA65_RS19030	0.15	+0.9
4,114,682	+		DZA65_RS19030	0.15	+0.5
4,114,682	+		DZA65_RS19030	0.15	-0.8
4,114,683	-		DZA65_RS19030	0.15	+2.2
4,114,683	-		DZA65_RS19030	0.15	-0.3
4,114,708	-		DZA65_RS19030	0.18	-0.8
4,114,766	+		DZA65_RS19030	0.24	-1.5
4,114,767	-		DZA65_RS19030	0.24	-3.1
4,114,767	-		DZA65_RS19030	0.24	-1.2
4,114,772	+		DZA65_RS19030	0.25	+0.3
4,114,772	+		DZA65_RS19030	0.25	+1.8
4,114,772	+		DZA65_RS19030	0.25	-1.0
4,114,772	+		DZA65_RS19030	0.25	+0.8
4,114,772	+		DZA65_RS19030	0.25	-0.8
4,114,772	+		DZA65_RS19030	0.25	+0.4
4,114,773	-		DZA65_RS19030	0.25	+0.7
4,114,773	-		DZA65_RS19030	0.25	-0.7
4,114,773	-		DZA65_RS19030	0.25	+1.7
4,114,773	-				+1.8
4,114,773	-		DZA65_RS19030	0.25	-1.5
4,114,773	-		DZA65_RS19030	0.25	-2.2
4,114,773	-		DZA65_RS19030	0.25	+0.0
4,114,773	-		DZA65_RS19030	0.25	-1.8
4,114,773	-		DZA65_RS19030	0.25	-1.2
4,114,773	-		DZA65_RS19030	0.25	-0.6
4,114,774	+		DZA65_RS19030	0.25	-0.2
4,114,782	+		DZA65_RS19030	0.26	+0.1
4,114,782	+		DZA65_RS19030	0.26	+0.5
4,114,783	-		DZA65_RS19030	0.26	+1.0
4,114,879	+		DZA65_RS19030	0.37	+0.1
4,114,880	-		DZA65_RS19030	0.38	-0.0
4,114,880	-		DZA65_RS19030	0.38	+0.5
4,114,880	-		DZA65_RS19030	0.38	-0.3
4,114,925	+		DZA65_RS19030	0.43	-1.4
4,114,925	+		DZA65_RS19030	0.43	+0.5
4,114,925	+		DZA65_RS19030	0.43	+0.1
4,114,925	+		DZA65_RS19030	0.43	+0.4
4,114,925	+		DZA65_RS19030	0.43	+0.4
4,114,925	+		DZA65_RS19030	0.43	+0.1
4,114,926	-		DZA65_RS19030	0.43	-1.1
4,114,946	+		DZA65_RS19030	0.45	-1.4
4,114,946	+		DZA65_RS19030	0.45	+0.8
4,114,946	+		DZA65_RS19030	0.45	+0.2
4,114,947	-		DZA65_RS19030	0.45	+0.1
4,114,947	-		DZA65_RS19030	0.45	+2.3
4,114,947	-		DZA65_RS19030	0.45	+0.8
4,114,988	+		DZA65_RS19030	0.50	+0.2
4,114,989	-		DZA65_RS19030	0.50	-0.2
4,114,989	-		DZA65_RS19030	0.50	-0.3
4,114,989	-		DZA65_RS19030	0.50	-0.3
4,114,989	-		DZA65_RS19030	0.50	+0.1
4,114,992	+		DZA65_RS19030	0.50	-0.4
4,114,992	+		DZA65_RS19030	0.50	-1.0
4,114,992	+		DZA65_RS19030	0.50	-0.5
4,114,992	+		DZA65_RS19030	0.50	+0.3
4,114,992	+		DZA65_RS19030	0.50	+1.8
4,114,992	+		DZA65_RS19030	0.50	-0.9
4,114,992	+		DZA65_RS19030	0.50	-1.2
4,114,992	+		DZA65_RS19030	0.50	-1.0
4,114,992	+		DZA65_RS19030	0.50	-1.3
4,114,993	-		DZA65_RS19030	0.51	-0.9
4,114,993	-		DZA65_RS19030	0.51	-1.4
4,114,993	-		DZA65_RS19030	0.51	+0.8
4,114,993	-		DZA65_RS19030	0.51	-1.2
4,114,993	-		DZA65_RS19030	0.51	-0.5
4,114,993	-		DZA65_RS19030	0.51	-1.8
4,114,993	-		DZA65_RS19030	0.51	+0.9
4,114,993	-		DZA65_RS19030	0.51	+0.4
4,114,993	-		DZA65_RS19030	0.51	+0.5
4,114,993	-		DZA65_RS19030	0.51	+0.0
4,114,993	-		DZA65_RS19030	0.51	+1.0
4,114,993	-		DZA65_RS19030	0.51	+0.2
4,114,993	-		DZA65_RS19030	0.51	-0.2
4,115,044	+		DZA65_RS19030	0.56	-0.3
4,115,044	+				+0.2
4,115,044	+		DZA65_RS19030	0.56	+0.8
4,115,044	+		DZA65_RS19030	0.56	+0.8
4,115,044	+		DZA65_RS19030	0.56	+1.4
4,115,044	+		DZA65_RS19030	0.56	+0.0
4,115,044	+		DZA65_RS19030	0.56	+0.3
4,115,044	+		DZA65_RS19030	0.56	-0.4
4,115,044	+		DZA65_RS19030	0.56	-0.9
4,115,044	+		DZA65_RS19030	0.56	-0.2
4,115,045	-		DZA65_RS19030	0.57	-1.5
4,115,045	-		DZA65_RS19030	0.57	-1.2
4,115,045	-		DZA65_RS19030	0.57	-0.4
4,115,045	-		DZA65_RS19030	0.57	-0.3
4,115,045	-		DZA65_RS19030	0.57	+0.8
4,115,045	-		DZA65_RS19030	0.57	+0.2
4,115,045	-		DZA65_RS19030	0.57	+0.5
4,115,045	-		DZA65_RS19030	0.57	-1.5
4,115,045	-		DZA65_RS19030	0.57	+0.5
4,115,048	+		DZA65_RS19030	0.57	-0.1
4,115,048	+		DZA65_RS19030	0.57	-0.9
4,115,048	+		DZA65_RS19030	0.57	+0.0
4,115,048	+		DZA65_RS19030	0.57	-0.2
4,115,048	+		DZA65_RS19030	0.57	-0.9
4,115,048	+		DZA65_RS19030	0.57	+0.4
4,115,048	+		DZA65_RS19030	0.57	-0.3
4,115,048	+		DZA65_RS19030	0.57	-0.3
4,115,048	+		DZA65_RS19030	0.57	-0.6
4,115,048	+		DZA65_RS19030	0.57	+0.2
4,115,049	-		DZA65_RS19030	0.57	+0.5
4,115,049	-		DZA65_RS19030	0.57	-0.3
4,115,049	-		DZA65_RS19030	0.57	+0.9
4,115,049	-		DZA65_RS19030	0.57	+1.1
4,115,049	-		DZA65_RS19030	0.57	-0.2
4,115,049	-		DZA65_RS19030	0.57	-0.2
4,115,049	-		DZA65_RS19030	0.57	+0.6
4,115,049	-		DZA65_RS19030	0.57	-0.1
4,115,049	-		DZA65_RS19030	0.57	-0.1
4,115,049	-		DZA65_RS19030	0.57	+0.6
4,115,049	-		DZA65_RS19030	0.57	-0.2
4,115,049	-		DZA65_RS19030	0.57	-1.0
4,115,057	+		DZA65_RS19030	0.58	+0.4
4,115,057	+		DZA65_RS19030	0.58	+0.9
4,115,057	+		DZA65_RS19030	0.58	+1.4
4,115,072	+		DZA65_RS19030	0.60	-1.3
4,115,072	+		DZA65_RS19030	0.60	-0.1
4,115,072	+		DZA65_RS19030	0.60	+1.2
4,115,073	-		DZA65_RS19030	0.60	+1.8
4,115,073	-		DZA65_RS19030	0.60	-0.5
4,115,123	+		DZA65_RS19030	0.66	+1.6
4,115,124	-		DZA65_RS19030	0.66	-0.5
4,115,165	+		DZA65_RS19030	0.70	-0.9
4,115,165	+		DZA65_RS19030	0.70	-0.2
4,115,165	+		DZA65_RS19030	0.70	-0.6
4,115,165	+		DZA65_RS19030	0.70	-0.3
4,115,166	-		DZA65_RS19030	0.71	-0.2
4,115,166	-		DZA65_RS19030	0.71	+0.1
4,115,166	-				-0.2
4,115,166	-		DZA65_RS19030	0.71	-0.4
4,115,166	-		DZA65_RS19030	0.71	-1.7
4,115,166	-		DZA65_RS19030	0.71	+1.0
4,115,166	-		DZA65_RS19030	0.71	+0.6
4,115,166	-		DZA65_RS19030	0.71	+0.5
4,115,166	-		DZA65_RS19030	0.71	-0.6
4,115,167	+		DZA65_RS19030	0.71	-1.5
4,115,168	-		DZA65_RS19030	0.71	+0.8
4,115,254	+		DZA65_RS19030	0.81	-0.3
4,115,254	+		DZA65_RS19030	0.81	-0.1
4,115,270	+		DZA65_RS19030	0.83	-0.8
4,115,270	+		DZA65_RS19030	0.83	-0.7
4,115,270	+		DZA65_RS19030	0.83	+0.9
4,115,270	+		DZA65_RS19030	0.83	+1.3
4,115,270	+		DZA65_RS19030	0.83	+0.4
4,115,270	+		DZA65_RS19030	0.83	-1.1
4,115,270	+		DZA65_RS19030	0.83	+1.0
4,115,270	+		DZA65_RS19030	0.83	-0.3
4,115,271	-		DZA65_RS19030	0.83	+0.7
4,115,271	-		DZA65_RS19030	0.83	-1.5
4,115,271	-		DZA65_RS19030	0.83	-0.9
4,115,271	-		DZA65_RS19030	0.83	+1.2
4,115,271	-		DZA65_RS19030	0.83	-1.8
4,115,271	-		DZA65_RS19030	0.83	-0.5
4,115,271	-		DZA65_RS19030	0.83	+0.8
4,115,271	-		DZA65_RS19030	0.83	-0.1
4,115,271	-		DZA65_RS19030	0.83	+0.0
4,115,271	-		DZA65_RS19030	0.83	-1.2
4,115,271	-		DZA65_RS19030	0.83	+0.4
4,115,271	-		DZA65_RS19030	0.83	+0.7
4,115,271	-		DZA65_RS19030	0.83	-0.3
4,115,271	-		DZA65_RS19030	0.83	+0.9
4,115,271	-		DZA65_RS19030	0.83	+0.1
4,115,285	+		DZA65_RS19030	0.84	+1.1
4,115,286	-		DZA65_RS19030	0.84	+1.0
4,115,292	+		DZA65_RS19030	0.85	+0.9
4,115,303	+		DZA65_RS19030	0.86	+1.4
4,115,304	-		DZA65_RS19030	0.87	+1.4
4,115,304	-		DZA65_RS19030	0.87	+0.7
4,115,390	+				+0.0
4,115,390	+				+0.0
4,115,390	+				+0.0
4,115,391	-				+0.5
4,115,391	-				+1.0
4,115,391	-				-1.0
4,115,393	+				+0.3
4,115,393	+				-0.6
4,115,393	+				+0.7
4,115,394	-				+0.2
4,115,394	-				+0.1
4,115,394	-				+0.7
4,115,394	-				-2.5
4,115,394	-				-0.5
4,115,394	-				-1.2
4,115,394	-				+0.3
4,115,408	+				-0.1
4,115,409	-				+0.7
4,115,430	+				-0.9
4,115,430	+				+1.2
4,115,431	-				-0.2
4,115,494	+				-0.8
4,115,500	-				+1.4
4,115,550	+				-0.9
4,115,551	-				+0.2
4,115,551	-				-0.5
4,115,551	-				+1.3
4,115,572	+				-1.2
4,115,572	+				-1.9
4,115,572	+				-0.8
4,115,572	+				-0.6
4,115,572	+				+0.4
4,115,574	+				+0.6
4,115,574	+				-2.0
4,115,574	+				+2.8
4,115,574	+				-0.8
4,115,574	+				-2.2
4,115,574	+				+1.5
4,115,575	-				+0.3
4,115,575	-				-0.8
4,115,636	+				-1.8
4,115,636	+				+0.0
4,115,636	+				-0.8
4,115,636	+				+0.3
4,115,637	-				-1.4
4,115,637	-				+2.0
4,115,637	-				-0.1
4,115,637	-				-0.2
4,115,637	-				+0.1
4,115,648	+		DZA65_RS19035	0.10	-1.4
4,115,648	+		DZA65_RS19035	0.10	-0.6
4,115,648	+		DZA65_RS19035	0.10	-0.0
4,115,649	-		DZA65_RS19035	0.10	-0.8
4,115,649	-		DZA65_RS19035	0.10	-0.4
4,115,649	-		DZA65_RS19035	0.10	+0.0
4,115,688	+		DZA65_RS19035	0.15	-1.1
4,115,688	+		DZA65_RS19035	0.15	+0.9
4,115,689	-		DZA65_RS19035	0.15	+0.8
4,115,689	-		DZA65_RS19035	0.15	-1.3
4,115,691	+		DZA65_RS19035	0.15	-0.6
4,115,691	+		DZA65_RS19035	0.15	-0.8
4,115,691	+		DZA65_RS19035	0.15	-0.2
4,115,691	+		DZA65_RS19035	0.15	-0.8
4,115,692	-		DZA65_RS19035	0.15	-0.5
4,115,692	-		DZA65_RS19035	0.15	-0.5
4,115,692	-		DZA65_RS19035	0.15	-0.6
4,115,692	-		DZA65_RS19035	0.15	+0.9
4,115,842	-		DZA65_RS19035	0.32	-0.6
4,115,842	-		DZA65_RS19035	0.32	+0.1
4,115,891	+		DZA65_RS19035	0.37	-0.1
4,115,891	+		DZA65_RS19035	0.37	-1.2
4,115,910	+		DZA65_RS19035	0.40	-0.7
4,115,910	+		DZA65_RS19035	0.40	-0.5
4,115,910	+		DZA65_RS19035	0.40	-0.2
4,115,911	-		DZA65_RS19035	0.40	-2.0
4,115,911	-		DZA65_RS19035	0.40	+1.2
4,115,965	+		DZA65_RS19035	0.46	+0.6
4,115,965	+		DZA65_RS19035	0.46	+0.1
4,115,965	+		DZA65_RS19035	0.46	+0.2
4,115,965	+		DZA65_RS19035	0.46	+1.5
4,115,966	-		DZA65_RS19035	0.46	+1.2
4,115,966	-		DZA65_RS19035	0.46	+0.2
4,116,012	+		DZA65_RS19035	0.51	-1.0
4,116,046	+		DZA65_RS19035	0.55	+0.1
4,116,046	+		DZA65_RS19035	0.55	-0.3
4,116,046	+		DZA65_RS19035	0.55	-0.5
4,116,046	+		DZA65_RS19035	0.55	+0.5
4,116,124	-		DZA65_RS19035	0.64	-0.1
4,116,138	+		DZA65_RS19035	0.65	+0.9
4,116,138	+		DZA65_RS19035	0.65	-1.7
4,116,382	+				-0.5
4,116,382	+				-0.4
4,116,382	+				-1.9
4,116,382	+				+1.1
4,116,382	+				-0.8
4,116,382	+				+0.7
4,116,382	+				-0.8
4,116,382	+				-0.0
4,116,382	+				+1.4
4,116,382	+				+1.3
4,116,382	+				+1.4
4,116,382	+				-0.4
4,116,382	+				-0.3
4,116,382	+				+1.7
4,116,382	+				+1.8
4,116,383	-				+0.1
4,116,383	-				+0.8
4,116,383	-				-2.0
4,116,383	-				-0.2
4,116,383	-				+0.6
4,116,383	-				+1.0
4,116,383	-				-1.2
4,116,383	-				-2.0
4,116,383	-				-0.2
4,116,383	-				-0.2
4,116,383	-				-0.1
4,116,383	-				+1.5
4,116,383	-				-0.3
4,116,383	-				-0.4
4,116,383	-				-1.5
4,116,383	-				+3.5
4,116,384	+				-0.9
4,116,384	+				+1.1
4,116,384	+				-0.1
4,116,384	+				-0.0
4,116,384	+				-1.5
4,116,384	+				+1.1
4,116,385	-				+1.0
4,116,385	-				-0.2
4,116,385	-				-0.2
4,116,393	-				+0.2
4,116,445	+				+0.4
4,116,445	+				-0.2
4,116,446	-				-0.0
4,116,446	-				+1.4
4,116,471	+				+0.0
4,116,472	-				+1.5
4,116,472	-				+0.6
4,116,472	-				+0.7
4,116,550	+				-0.5
4,116,551	-				+0.0
4,116,551	-				-2.8
4,116,551	-				+0.2
4,116,551	-				-0.3
4,116,705	+				-1.3
4,116,705	+				+1.1
4,116,705	+				-0.5
4,116,706	-				+0.3
4,116,706	-				-0.5
4,116,706	-				+0.2
4,116,706	-				+0.8
4,116,706	-				-0.2
4,116,706	-				+0.1
4,116,732	+				-1.5
4,116,733	-				-1.2
4,116,733	-				+0.1
4,116,733	-				-1.2
4,116,733	-				+0.8
4,116,794	-		DZA65_RS19040	0.19	-1.4
4,116,802	+		DZA65_RS19040	0.21	-1.0
4,116,802	+		DZA65_RS19040	0.21	+0.3
4,116,802	+		DZA65_RS19040	0.21	+1.4
4,116,803	-		DZA65_RS19040	0.21	+0.5
4,116,851	-		DZA65_RS19040	0.32	+0.1
4,116,852	+		DZA65_RS19040	0.32	-1.0
4,116,852	+		DZA65_RS19040	0.32	+0.2
4,116,853	-		DZA65_RS19040	0.32	+0.6
4,116,936	+		DZA65_RS19040	0.51	+0.8
4,116,936	+		DZA65_RS19040	0.51	-0.4
4,116,936	+		DZA65_RS19040	0.51	+4.0
4,116,936	+		DZA65_RS19040	0.51	+0.8
4,116,936	+		DZA65_RS19040	0.51	+0.4
4,116,936	+		DZA65_RS19040	0.51	+0.1
4,116,937	-		DZA65_RS19040	0.51	-0.4
4,116,937	-		DZA65_RS19040	0.51	+1.3
4,116,937	-		DZA65_RS19040	0.51	+0.3
4,116,937	-		DZA65_RS19040	0.51	+0.0
4,116,937	-		DZA65_RS19040	0.51	+2.7
4,116,937	-		DZA65_RS19040	0.51	+0.1
4,116,937	-		DZA65_RS19040	0.51	-0.4
4,116,946	+		DZA65_RS19040	0.53	+0.2
4,116,946	+		DZA65_RS19040	0.53	-2.0
4,116,947	-		DZA65_RS19040	0.54	-0.3
4,116,981	+		DZA65_RS19040	0.61	-1.2
4,116,982	-		DZA65_RS19040	0.61	-0.6
4,117,024	-		DZA65_RS19040	0.71	-1.4
4,117,024	-		DZA65_RS19040	0.71	-1.5
4,117,099	-		DZA65_RS19040	0.88	+0.2
4,117,141	-				-1.5
4,117,192	+				+0.8
4,117,192	+				+0.1
4,117,192	+				+0.1
4,117,192	+				+0.1
4,117,192	+				-0.0
4,117,392	+		DZA65_RS19045	0.16	+1.0