Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17465

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,760,643	+				-2.5
3,760,644	-				-1.4
3,760,648	+				-0.5
3,760,648	+				-1.3
3,760,648	+				-0.9
3,760,648	+				+0.4
3,760,649	-				-1.9
3,760,649	-				+2.2
3,760,649	-				-0.7
3,760,671	+				+1.8
3,760,671	+				-1.4
3,760,674	+				+0.5
3,760,675	-				-0.6
3,760,726	+				-0.2
3,760,726	+				-0.8
3,760,727	-				+0.6
3,760,727	-				-0.9
3,760,818	+				+0.4
3,760,819	-				-0.8
3,760,847	+				+0.6
3,760,847	+				+1.5
3,760,847	+				+1.4
3,760,847	+				+0.5
3,760,847	+				-0.7
3,760,848	-				-1.0
3,760,848	-				-2.4
3,760,848	-				-1.3
3,760,848	-				+1.2
3,760,848	-				+0.9
3,760,848	-				+0.8
3,760,848	-				-1.7
3,760,848	-				-0.4
3,760,870	-				+1.5
3,760,879	+				+0.2
3,760,893	+				+0.8
3,760,893	+				+2.3
3,760,960	+				+0.2
3,760,960	+				+3.8
3,760,960	+				+3.0
3,760,960	+				-1.2
3,760,994	+				-2.2
3,760,995	-				+0.4
3,761,251	+		DZA65_RS17460	0.41	-1.2
3,761,251	+		DZA65_RS17460	0.41	-0.9
3,761,251	+		DZA65_RS17460	0.41	-1.0
3,761,251	+		DZA65_RS17460	0.41	+0.5
3,761,251	+		DZA65_RS17460	0.41	-0.7
3,761,251	+		DZA65_RS17460	0.41	-0.9
3,761,252	-		DZA65_RS17460	0.41	-0.7
3,761,252	-		DZA65_RS17460	0.41	-1.7
3,761,252	-		DZA65_RS17460	0.41	-0.0
3,761,252	-		DZA65_RS17460	0.41	-1.7
3,761,252	-		DZA65_RS17460	0.41	+1.0
3,761,252	-		DZA65_RS17460	0.41	-0.9
3,761,252	-		DZA65_RS17460	0.41	-1.8
3,761,252	-		DZA65_RS17460	0.41	-1.8
3,761,271	+		DZA65_RS17460	0.45	+0.1
3,761,271	+		DZA65_RS17460	0.45	+1.6
3,761,272	-		DZA65_RS17460	0.45	-0.8
3,761,272	-		DZA65_RS17460	0.45	+1.6
3,761,272	-		DZA65_RS17460	0.45	-0.9
3,761,298	+		DZA65_RS17460	0.50	+0.2
3,761,298	+		DZA65_RS17460	0.50	-1.4
3,761,299	-		DZA65_RS17460	0.50	-2.4
3,761,397	+		DZA65_RS17460	0.69	-0.1
3,761,566	+				+0.3
3,761,582	+				+1.0
3,761,620	+				-0.1
3,761,620	+				-0.6
3,761,621	-				-0.6
3,761,621	-				+1.8
3,761,621	-				+1.5
3,761,639	+				+0.8
3,761,639	+				-0.2
3,761,639	+				-2.2
3,761,640	-				-0.9
3,761,640	-				-0.5
3,761,640	-				-0.8
3,761,640	-				+0.5
3,761,640	-				+0.3
3,761,670	+				-0.8
3,761,687	+				-0.9
3,761,687	+				-0.7
3,761,687	+				+0.6
3,761,687	+				+1.8
3,761,687	+				-1.5
3,761,687	+				-1.7
3,761,687	+				-0.6
3,761,687	+				-0.9
3,761,687	+				-0.7
3,761,687	+				-2.7
3,761,687	+				+0.5
3,761,687	+				-0.7
3,761,688	-				+1.5
3,761,688	-				+1.7
3,761,688	-				-0.1
3,761,688	-				-0.1
3,761,688	-				+0.1
3,761,696	+		DZA65_RS17465	0.11	+2.6
3,761,696	+		DZA65_RS17465	0.11	-0.4
3,761,697	-		DZA65_RS17465	0.11	-0.3
3,761,732	+		DZA65_RS17465	0.18	-0.6
3,761,849	+		DZA65_RS17465	0.40	-1.2
3,761,849	+		DZA65_RS17465	0.40	+0.3
3,761,849	+		DZA65_RS17465	0.40	-0.7
3,761,849	+		DZA65_RS17465	0.40	-0.4
3,761,849	+		DZA65_RS17465	0.40	-1.4
3,761,849	+		DZA65_RS17465	0.40	+0.1
3,761,849	+		DZA65_RS17465	0.40	+0.1
3,761,849	+		DZA65_RS17465	0.40	-1.4
3,761,849	+		DZA65_RS17465	0.40	-0.7
3,761,849	+		DZA65_RS17465	0.40	+0.3
3,761,849	+		DZA65_RS17465	0.40	-0.3
3,761,849	+		DZA65_RS17465	0.40	+0.9
3,761,849	+		DZA65_RS17465	0.40	+0.9
3,761,849	+		DZA65_RS17465	0.40	+0.3
3,761,849	+		DZA65_RS17465	0.40	-1.4
3,761,849	+		DZA65_RS17465	0.40	+1.4
3,761,849	+		DZA65_RS17465	0.40	-1.4
3,761,850	-		DZA65_RS17465	0.40	-0.3
3,761,850	-		DZA65_RS17465	0.40	-1.7
3,761,850	-		DZA65_RS17465	0.40	-2.2
3,761,850	-		DZA65_RS17465	0.40	+0.4
3,761,850	-		DZA65_RS17465	0.40	+0.9
3,761,850	-		DZA65_RS17465	0.40	-0.9
3,761,850	-		DZA65_RS17465	0.40	+0.2
3,761,850	-		DZA65_RS17465	0.40	-0.7
3,761,850	-		DZA65_RS17465	0.40	+0.1
3,761,850	-		DZA65_RS17465	0.40	-0.5
3,761,850	-		DZA65_RS17465	0.40	-2.4
3,761,850	-		DZA65_RS17465	0.40	-2.6
3,761,894	+		DZA65_RS17465	0.48	-0.4
3,762,037	-		DZA65_RS17465	0.75	-1.4
3,762,060	+		DZA65_RS17465	0.79	+0.5
3,762,101	+		DZA65_RS17465	0.87	+0.8
3,762,101	+		DZA65_RS17465	0.87	-0.4
3,762,101	+		DZA65_RS17465	0.87	+0.6
3,762,101	+		DZA65_RS17465	0.87	-0.4
3,762,102	-		DZA65_RS17465	0.87	+0.6
3,762,102	-		DZA65_RS17465	0.87	-1.5
3,762,102	-		DZA65_RS17465	0.87	-0.9
3,762,109	+		DZA65_RS17465	0.88	-1.1
3,762,109	+		DZA65_RS17465	0.88	-0.3
3,762,110	-		DZA65_RS17465	0.88	-0.8
3,762,158	+				+1.1
3,762,158	+				-0.7
3,762,158	+				+0.5
3,762,158	+				-0.6
3,762,159	-				-1.1
3,762,187	+				+1.5
3,762,187	+				-0.4
3,762,188	-				+0.3
3,762,188	-				-1.7
3,762,188	-				-0.2
3,762,195	+				-0.9
3,762,195	+				+0.4
3,762,195	+				-0.9
3,762,196	-				+0.8
3,762,204	+				+0.8
3,762,204	+				+0.7
3,762,204	+				-0.0
3,762,204	+				-0.1
3,762,205	-				-1.4
3,762,205	-				+0.4
3,762,210	+				+0.3
3,762,210	+				-0.2
3,762,210	+				+0.3
3,762,211	-				+1.0
3,762,211	-				+0.9
3,762,211	-				-0.4
3,762,212	+				+1.1
3,762,212	+				+2.1
3,762,212	+				-0.1
3,762,213	-				+0.5
3,762,213	-				-1.8
3,762,213	-				-0.0
3,762,213	-				+0.3
3,762,213	-				+0.0
3,762,213	-				+0.1
3,762,229	-				-0.4
3,762,242	+				+2.1
3,762,242	+				+0.7
3,762,242	+				+0.9
3,762,243	-				-0.2
3,762,243	-				-1.1
3,762,243	-				-1.3
3,762,243	-				-0.5
3,762,243	-				+0.1
3,762,243	-				+0.8
3,762,247	+				+1.1
3,762,247	+				+0.3
3,762,247	+				-2.3
3,762,248	-				-0.1
3,762,248	-				+1.5
3,762,248	-				-0.4
3,762,248	-				-0.6
3,762,248	-				+0.6
3,762,248	-				-1.2
3,762,253	+				-1.1
3,762,253	+				-1.4
3,762,254	-				-0.6
3,762,254	-				-1.5
3,762,254	-				-0.4
3,762,310	+				-1.1
3,762,311	-				-0.4
3,762,329	+				-0.2
3,762,329	+				+0.8
3,762,330	-				+0.3
3,762,354	-				+0.2
3,762,354	-				+0.1
3,762,354	-				-0.9
3,762,387	-				+0.1
3,762,387	-				-0.6
3,762,400	+				+1.1
3,762,400	+				-0.9
3,762,400	+				-0.5
3,762,401	-				-0.1
3,762,401	-				-0.1
3,762,401	-				+0.6
3,762,401	-				+1.6
3,762,401	-				+0.2
3,762,401	-				-1.4
3,762,402	+				+0.5
3,762,402	+				+0.3
3,762,402	+				-0.6
3,762,402	+				-0.2
3,762,402	+				+0.7
3,762,402	+				+0.4
3,762,402	+				+0.6
3,762,403	-				+0.8
3,762,403	-				+0.6
3,762,403	-				+0.6
3,762,441	+				+0.4
3,762,441	+				-0.1
3,762,441	+				-0.1
3,762,441	+				+1.1
3,762,441	+				+0.1
3,762,441	+				+1.3
3,762,441	+				-1.1
3,762,442	-				-2.7
3,762,442	-				-1.9
3,762,442	-				-0.2
3,762,442	-				-2.5
3,762,462	-				-2.2
3,762,481	+				+0.9
3,762,481	+				-0.2
3,762,482	-				+0.1
3,762,482	-				-0.4
3,762,582	+		DZA65_RS17470	0.10	-1.3
3,762,582	+		DZA65_RS17470	0.10	+0.2
3,762,607	+		DZA65_RS17470	0.14	+0.6
3,762,607	+		DZA65_RS17470	0.14	-0.5
3,762,607	+		DZA65_RS17470	0.14	+0.9
3,762,607	+		DZA65_RS17470	0.14	-0.5
3,762,607	+		DZA65_RS17470	0.14	-0.6
3,762,607	+		DZA65_RS17470	0.14	-1.2
3,762,607	+		DZA65_RS17470	0.14	-1.1
3,762,607	+		DZA65_RS17470	0.14	+0.6
3,762,607	+		DZA65_RS17470	0.14	-0.4
3,762,607	+		DZA65_RS17470	0.14	+0.2
3,762,608	-		DZA65_RS17470	0.14	+0.8
3,762,608	-		DZA65_RS17470	0.14	-0.7
3,762,608	-		DZA65_RS17470	0.14	+0.6
3,762,608	-		DZA65_RS17470	0.14	-0.6
3,762,608	-		DZA65_RS17470	0.14	-1.1
3,762,644	-		DZA65_RS17470	0.20	+1.1
3,762,718	+		DZA65_RS17470	0.31	-0.1
3,762,718	+		DZA65_RS17470	0.31	+0.1
3,762,718	+		DZA65_RS17470	0.31	+1.0
3,762,719	-		DZA65_RS17470	0.31	+1.0
3,762,719	-		DZA65_RS17470	0.31	+1.7
3,762,721	+		DZA65_RS17470	0.31	-0.8
3,762,721	+		DZA65_RS17470	0.31	+0.5
3,762,721	+		DZA65_RS17470	0.31	+0.3
3,762,722	-		DZA65_RS17470	0.31	-1.2
3,762,824	+		DZA65_RS17470	0.47	-1.9
3,762,883	+		DZA65_RS17470	0.56	+0.8
3,762,883	+		DZA65_RS17470	0.56	+0.6
3,762,883	+		DZA65_RS17470	0.56	+1.8
3,762,883	+		DZA65_RS17470	0.56	+0.5
3,762,884	-		DZA65_RS17470	0.56	+0.3
3,762,884	-		DZA65_RS17470	0.56	-0.7
3,762,884	-		DZA65_RS17470	0.56	+0.1
3,762,884	-		DZA65_RS17470	0.56	+0.1
3,762,884	-		DZA65_RS17470	0.56	-0.6
3,762,884	-		DZA65_RS17470	0.56	-0.4
3,762,886	-		DZA65_RS17470	0.57	+0.4
3,762,890	+		DZA65_RS17470	0.57	+0.3
3,762,890	+		DZA65_RS17470	0.57	-0.7
3,762,890	+		DZA65_RS17470	0.57	-2.2
3,762,890	+		DZA65_RS17470	0.57	-1.4
3,762,890	+		DZA65_RS17470	0.57	+0.5
3,762,890	+		DZA65_RS17470	0.57	+0.8
3,762,890	+		DZA65_RS17470	0.57	+0.3
3,762,890	+		DZA65_RS17470	0.57	-0.8
3,762,890	+		DZA65_RS17470	0.57	-1.7
3,762,890	+		DZA65_RS17470	0.57	+1.2
3,762,890	+		DZA65_RS17470	0.57	-1.7
3,762,890	+		DZA65_RS17470	0.57	+0.1
3,762,891	-		DZA65_RS17470	0.57	+0.4
3,762,891	-		DZA65_RS17470	0.57	-0.0
3,762,891	-		DZA65_RS17470	0.57	-0.0
3,762,891	-		DZA65_RS17470	0.57	-1.4
3,762,891	-		DZA65_RS17470	0.57	-3.2
3,762,891	-		DZA65_RS17470	0.57	-0.2
3,762,891	-		DZA65_RS17470	0.57	-1.7
3,762,891	-		DZA65_RS17470	0.57	-0.8
3,762,891	-		DZA65_RS17470	0.57	+0.6
3,762,891	-		DZA65_RS17470	0.57	-1.4
3,762,891	-		DZA65_RS17470	0.57	-1.4
3,762,891	-		DZA65_RS17470	0.57	-0.1
3,762,894	+		DZA65_RS17470	0.58	+0.5
3,762,895	-		DZA65_RS17470	0.58	-0.2
3,762,895	-		DZA65_RS17470	0.58	+1.6
3,762,895	-		DZA65_RS17470	0.58	-1.4
3,762,967	+		DZA65_RS17470	0.69	-0.2
3,762,967	+		DZA65_RS17470	0.69	-0.4
3,762,967	+		DZA65_RS17470	0.69	+0.9
3,762,967	+		DZA65_RS17470	0.69	-0.4
3,762,967	+		DZA65_RS17470	0.69	+1.2
3,762,967	+		DZA65_RS17470	0.69	-0.5
3,762,967	+		DZA65_RS17470	0.69	-0.1
3,762,967	+		DZA65_RS17470	0.69	+0.5
3,762,967	+		DZA65_RS17470	0.69	-1.2
3,762,968	-		DZA65_RS17470	0.69	+1.1
3,762,968	-		DZA65_RS17470	0.69	-0.8
3,762,968	-		DZA65_RS17470	0.69	+0.8
3,762,968	-		DZA65_RS17470	0.69	+0.3
3,762,968	-		DZA65_RS17470	0.69	+2.7
3,762,968	-		DZA65_RS17470	0.69	+0.9
3,763,038	+		DZA65_RS17470	0.80	-1.4
3,763,038	+		DZA65_RS17470	0.80	+1.6
3,763,038	+		DZA65_RS17470	0.80	+0.5
3,763,038	+		DZA65_RS17470	0.80	-1.9
3,763,038	+		DZA65_RS17470	0.80	-2.4
3,763,039	-		DZA65_RS17470	0.80	+0.8
3,763,039	-		DZA65_RS17470	0.80	+0.8
3,763,039	-		DZA65_RS17470	0.80	-0.9
3,763,039	-		DZA65_RS17470	0.80	-1.4
3,763,039	-		DZA65_RS17470	0.80	+0.4
3,763,039	-		DZA65_RS17470	0.80	+0.6
3,763,108	+				-0.4
3,763,108	+				-0.5
3,763,108	+				+1.0
3,763,108	+				-0.1
3,763,108	+				+0.5
3,763,108	+				+0.2
3,763,108	+				-0.9
3,763,108	+				+1.0
3,763,109	-				-0.2
3,763,109	-				-1.7
3,763,109	-				+1.3
3,763,109	-				-1.3
3,763,109	-				-0.4
3,763,162	+				+2.6
3,763,162	+				-2.4
3,763,162	+				+0.9
3,763,162	+				-0.4
3,763,162	+				+0.2
3,763,163	-				-0.4
3,763,163	-				+2.1
3,763,163	-				-1.1
3,763,163	-				-1.4
3,763,163	-				-0.2