Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17335

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,736,755	-		DZA65_RS17330	0.11	-1.4
3,736,755	-		DZA65_RS17330	0.11	-0.9
3,736,762	+				-0.9
3,736,820	+		DZA65_RS17330	0.18	-0.4
3,736,865	-		DZA65_RS17330	0.23	-1.2
3,736,865	-		DZA65_RS17330	0.23	-0.4
3,736,895	+		DZA65_RS17330	0.26	-2.4
3,736,896	-		DZA65_RS17330	0.26	-2.7
3,736,896	-		DZA65_RS17330	0.26	-1.2
3,736,959	-		DZA65_RS17330	0.32	+1.2
3,737,043	-		DZA65_RS17330	0.41	+1.1
3,737,111	-		DZA65_RS17330	0.48	+1.4
3,737,111	-		DZA65_RS17330	0.48	+0.4
3,737,235	+		DZA65_RS17330	0.60	-0.7
3,737,294	+		DZA65_RS17330	0.66	-0.5
3,737,331	-		DZA65_RS17330	0.70	-1.4
3,737,331	-		DZA65_RS17330	0.70	-0.7
3,737,359	+		DZA65_RS17330	0.73	+0.2
3,737,360	-		DZA65_RS17330	0.73	-2.4
3,737,471	+		DZA65_RS17330	0.85	+0.6
3,737,472	-		DZA65_RS17330	0.85	-0.1
3,737,472	-		DZA65_RS17330	0.85	+0.2
3,737,562	+				-0.1
3,737,563	-				+0.3
3,737,607	+				-0.4
3,737,607	+				-0.9
3,737,607	+				+0.1
3,737,608	-				-1.5
3,737,608	-				+0.4
3,737,608	-				-0.8
3,737,621	+				-0.4
3,737,621	+				-1.2
3,737,621	+				-1.2
3,737,622	-				-0.2
3,737,622	-				-1.2
3,737,622	-				+0.8
3,737,622	-				+0.4
3,737,622	-				-0.3
3,737,622	-				+0.1
3,737,624	+				-0.2
3,737,624	+				+0.2
3,737,624	+				-0.2
3,737,624	+				+1.0
3,737,624	+				-2.2
3,737,625	-				-0.2
3,737,625	-				-0.5
3,737,625	-				+0.9
3,737,625	-				+1.2
3,737,625	-				-0.6
3,737,625	-				+0.2
3,737,625	-				-1.2
3,737,636	+				-1.9
3,737,636	+				-0.9
3,737,637	-				+1.3
3,737,653	-				+0.2
3,737,673	+				+1.2
3,737,678	+				-0.2
3,737,678	+				-2.2
3,737,678	+				+0.4
3,737,686	+				+0.9
3,737,686	+				-0.1
3,737,686	+				+0.4
3,737,696	+				-1.0
3,737,708	+				-0.6
3,738,507	+				-0.8
3,738,508	-				+1.1
3,738,508	-				+1.0
3,738,508	-				+0.4
3,738,508	-				+0.3
3,738,510	+				+0.6
3,738,511	-				-0.7
3,738,511	-				+0.6
3,738,558	+				+0.2
3,738,558	+				+0.2
3,738,558	+				+1.1
3,738,558	+				-0.4
3,738,558	+				+2.0
3,738,558	+				+0.4
3,738,558	+				-0.4
3,738,558	+				+1.4
3,738,558	+				-1.9
3,738,558	+				-1.7
3,738,558	+				+0.0
3,738,559	-				+0.6
3,738,559	-				+0.1
3,738,559	-				+0.2
3,738,559	-				-0.4
3,738,559	-				-0.0
3,738,559	-				+1.4
3,738,559	-				-0.1
3,738,559	-				-0.1
3,738,579	+				-3.9
3,738,605	+				+0.4
3,738,605	+				-0.1
3,738,606	-				-2.4
3,738,606	-				-0.8
3,738,608	+				+1.2
3,738,609	-				+0.1
3,738,609	-				+0.6
3,738,612	+				+2.6
3,738,612	+				-1.6
3,738,612	+				+1.1
3,738,613	-				+0.1
3,738,613	-				+1.4
3,738,613	-				-0.4
3,738,613	-				-2.1
3,738,683	+				+0.9
3,738,743	+				-2.4
3,738,744	-				+0.1
3,738,744	-				-0.6
3,738,754	+				-1.9
3,738,755	-				+1.6
3,738,780	+				+1.4
3,738,781	-				-1.4
3,738,781	-				+0.6
3,738,795	-				-2.7
3,738,795	-				+0.9
3,738,804	-				+0.3
3,738,804	-				+0.3
3,738,825	-		DZA65_RS17340	0.11	-0.1
3,738,835	+		DZA65_RS17340	0.14	+0.5
3,738,835	+		DZA65_RS17340	0.14	-0.1
3,738,836	-		DZA65_RS17340	0.14	+0.2
3,738,872	+		DZA65_RS17340	0.24	+1.6
3,738,873	-		DZA65_RS17340	0.25	+0.6
3,738,894	-		DZA65_RS17340	0.31	-0.2
3,738,906	-		DZA65_RS17340	0.35	-0.2
3,738,995	+		DZA65_RS17340	0.61	+1.2
3,738,995	+		DZA65_RS17340	0.61	-0.0
3,738,995	+		DZA65_RS17340	0.61	+0.6
3,738,995	+		DZA65_RS17340	0.61	+0.2
3,738,995	+		DZA65_RS17340	0.61	-0.9
3,738,995	+		DZA65_RS17340	0.61	-1.1
3,738,995	+		DZA65_RS17340	0.61	-1.1
3,738,995	+		DZA65_RS17340	0.61	+0.3
3,738,995	+		DZA65_RS17340	0.61	+0.5
3,738,995	+		DZA65_RS17340	0.61	+0.0
3,738,995	+		DZA65_RS17340	0.61	-1.0
3,738,995	+		DZA65_RS17340	0.61	+0.2
3,738,995	+		DZA65_RS17340	0.61	-0.4
3,738,996	-		DZA65_RS17340	0.61	-0.9
3,738,996	-		DZA65_RS17340	0.61	-1.4
3,738,996	-		DZA65_RS17340	0.61	-0.7
3,738,996	-		DZA65_RS17340	0.61	+1.4
3,738,996	-		DZA65_RS17340	0.61	+0.2
3,738,996	-		DZA65_RS17340	0.61	-1.2
3,738,996	-		DZA65_RS17340	0.61	-0.5
3,738,996	-		DZA65_RS17340	0.61	-0.9
3,738,996	-		DZA65_RS17340	0.61	-0.5
3,738,996	-		DZA65_RS17340	0.61	+0.4
3,738,996	-		DZA65_RS17340	0.61	+0.8
3,738,996	-		DZA65_RS17340	0.61	-1.2
3,738,999	+		DZA65_RS17340	0.62	+0.1
3,738,999	+		DZA65_RS17340	0.62	+0.2
3,738,999	+		DZA65_RS17340	0.62	+0.4
3,738,999	+		DZA65_RS17340	0.62	+0.5
3,738,999	+		DZA65_RS17340	0.62	-0.1
3,738,999	+		DZA65_RS17340	0.62	-0.6
3,738,999	+		DZA65_RS17340	0.62	-0.4
3,738,999	+		DZA65_RS17340	0.62	+0.0
3,738,999	+		DZA65_RS17340	0.62	-0.4
3,738,999	+		DZA65_RS17340	0.62	-0.4
3,738,999	+		DZA65_RS17340	0.62	+1.0
3,738,999	+		DZA65_RS17340	0.62	+0.4
3,738,999	+		DZA65_RS17340	0.62	+1.0
3,738,999	+		DZA65_RS17340	0.62	-0.8
3,738,999	+		DZA65_RS17340	0.62	+0.2
3,738,999	+		DZA65_RS17340	0.62	-2.4
3,739,000	-		DZA65_RS17340	0.62	+0.7
3,739,000	-		DZA65_RS17340	0.62	-0.5
3,739,000	-		DZA65_RS17340	0.62	-0.6
3,739,000	-		DZA65_RS17340	0.62	-0.7
3,739,000	-		DZA65_RS17340	0.62	-0.6
3,739,000	-		DZA65_RS17340	0.62	-0.0
3,739,000	-		DZA65_RS17340	0.62	+1.4
3,739,000	-		DZA65_RS17340	0.62	-1.7
3,739,000	-				+1.4
3,739,000	-		DZA65_RS17340	0.62	-1.8
3,739,000	-		DZA65_RS17340	0.62	-1.2
3,739,000	-		DZA65_RS17340	0.62	+0.4
3,739,000	-		DZA65_RS17340	0.62	-2.4
3,739,001	+		DZA65_RS17340	0.63	+1.5
3,739,047	-		DZA65_RS17340	0.76	-1.4
3,739,099	+				-2.2
3,739,100	-				-0.6
3,739,100	-				-0.9
3,739,105	+				+1.2
3,739,106	-				-0.4
3,739,106	-				+1.1
3,739,125	+				-0.6
3,739,125	+				-2.5
3,739,125	+				+0.2
3,739,126	-				-0.0
3,739,126	-				-2.2
3,739,149	+				-2.8
3,739,149	+				+1.5
3,739,149	+				-0.2
3,739,149	+				-1.8
3,739,149	+				-0.6
3,739,149	+				-0.9
3,739,149	+				+2.6
3,739,149	+				-0.6
3,739,150	-				+0.3
3,739,150	-				-0.0
3,739,150	-				-2.3
3,739,150	-				+0.1
3,739,150	-				-0.6
3,739,150	-				-1.5
3,739,150	-				-0.4
3,739,260	+				-0.1
3,739,261	-				-0.4
3,739,286	+				-0.9
3,739,286	+				+0.4
3,739,286	+				-1.0
3,739,286	+				-1.7
3,739,286	+				+0.4
3,739,286	+				-0.2
3,739,286	+				-0.1
3,739,287	-				-1.7
3,739,287	-				-0.9
3,739,287	-				-2.4
3,739,287	-				-0.0
3,739,358	-				-1.9
3,739,358	-				-2.4
3,739,358	-				-1.4
3,739,398	-				-2.5
3,739,403	+				-0.1
3,739,404	-				-2.9
3,739,448	-				-0.9
3,739,465	+				-1.3
3,739,465	+				-0.4
3,739,465	+				-0.6
3,739,466	-				-2.8
3,739,466	-				-0.5
3,739,466	-				+0.2
3,739,466	-				-1.2
3,739,467	+				-2.4
3,739,467	+				-1.1
3,739,467	+				+0.1
3,739,467	+				-0.8
3,739,467	+				-1.2
3,739,467	+				-3.5
3,739,467	+				-1.2
3,739,467	+				-2.1
3,739,467	+				+2.0
3,739,467	+				-0.9
3,739,467	+				-1.6
3,739,467	+				+0.3
3,739,467	+				-1.2
3,739,467	+				-1.1
3,739,468	-				-3.6
3,739,468	-				-1.2
3,739,468	-				-2.2
3,739,468	-				-2.1
3,739,468	-				-1.2
3,739,468	-				-1.7
3,739,468	-				-0.4
3,739,468	-				-1.9
3,739,468	-				-3.1
3,739,468	-				-0.7
3,739,489	+				-1.2