Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14200

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,058,915	+				+0.4
3,058,915	+				+2.2
3,058,916	-				+0.5
3,058,916	-				-1.2
3,058,916	-				+2.7
3,058,916	-				-1.2
3,058,987	+				+2.0
3,058,987	+				+0.1
3,058,987	+				-2.6
3,059,003	-				+0.3
3,059,078	+				-0.9
3,059,078	+				-0.6
3,059,079	-				+0.1
3,059,081	+				-1.4
3,059,081	+				-1.6
3,059,081	+				-0.1
3,059,081	+				-0.9
3,059,081	+				-0.2
3,059,081	+				-0.4
3,059,081	+				-1.4
3,059,081	+				+0.8
3,059,082	-				+0.4
3,059,082	-				+0.1
3,059,082	-				+1.7
3,059,082	-				+1.6
3,059,082	-				+1.1
3,059,082	-				+0.6
3,059,122	+				-1.6
3,059,123	-				+0.3
3,059,149	+				+0.9
3,059,150	-				-1.6
3,059,163	+				-0.3
3,059,164	-				+0.9
3,059,190	+				-0.2
3,059,191	-				+0.4
3,059,233	+				-0.3
3,059,235	+				-2.4
3,059,235	+				-0.6
3,059,236	-				-1.9
3,059,236	-				+0.0
3,059,236	-				-0.2
3,059,241	+				-0.6
3,059,241	+				-0.3
3,059,241	+				-0.5
3,059,241	+				+0.4
3,059,241	+				-0.4
3,059,242	-				-0.9
3,059,242	-				+2.3
3,059,242	-				-0.7
3,059,251	+				-0.2
3,059,370	+				-0.4
3,059,370	+				-1.2
3,059,370	+				-0.6
3,059,429	-				-0.9
3,059,430	+				+0.4
3,059,431	-				+0.3
3,059,539	+				-0.6
3,059,604	-				-0.6
3,059,604	-				+0.7
3,059,681	+				-0.7
3,059,681	+				+0.4
3,059,681	+				+0.7
3,059,681	+				+1.1
3,059,682	-				-0.1
3,059,804	+				+0.2
3,059,804	+				+0.4
3,059,805	-				-1.4
3,059,805	-				-3.0
3,059,805	-				+1.6
3,059,808	+				+0.4
3,059,808	+				-1.6
3,059,808	+				-2.2
3,059,808	+				+0.4
3,059,808	+				-0.6
3,059,808	+				+0.6
3,059,808	+				-1.0
3,059,808	+				-0.3
3,059,808	+				-0.6
3,059,808	+				+0.0
3,059,808	+				+0.4
3,059,809	-				+0.1
3,059,809	-				+0.8
3,059,809	-				-0.5
3,059,809	-				-0.4
3,059,809	-				+1.4
3,059,822	+				-0.6
3,059,834	-				+1.1
3,060,088	-				-2.4
3,060,138	+				-1.0
3,060,139	-				-1.0
3,060,198	-				-2.2
3,060,198	-				-0.4
3,060,312	-				-0.2
3,060,312	-				-0.2
3,060,325	+				-1.9
3,060,325	+				-1.4
3,060,325	+				-0.3
3,060,326	-				+1.3
3,060,379	+				+1.0
3,060,379	+				-0.4
3,060,379	+				+0.4
3,060,379	+				+0.0
3,060,380	-				-0.9
3,060,380	-				+0.9
3,060,418	+				-0.2
3,060,454	-				-0.2
3,060,454	-				-1.9
3,060,454	-				-0.1
3,060,491	+				-1.2
3,060,491	+				-0.5
3,060,491	+				-0.6
3,060,491	+				-2.2
3,060,492	-				+0.1
3,060,492	-				-0.2
3,060,544	+				+0.1
3,060,561	+				-0.6
3,060,562	-				+0.0
3,060,562	-				+0.1
3,060,562	-				+0.2
3,060,610	+				-0.2
3,060,610	+				-0.6
3,060,611	-				+0.2
3,060,709	+		DZA65_RS14200	0.11	+0.8
3,060,772	+		DZA65_RS14200	0.12	-0.4
3,060,772	+		DZA65_RS14200	0.12	+0.7
3,060,772	+		DZA65_RS14200	0.12	-1.7
3,060,772	+		DZA65_RS14200	0.12	+0.3
3,060,773	-		DZA65_RS14200	0.12	-0.3
3,060,773	-		DZA65_RS14200	0.12	-1.0
3,060,773	-		DZA65_RS14200	0.12	+0.7
3,060,774	+		DZA65_RS14200	0.12	-0.7
3,060,774	+		DZA65_RS14200	0.12	+1.4
3,060,774	+		DZA65_RS14200	0.12	-2.9
3,060,774	+		DZA65_RS14200	0.12	-0.0
3,060,774	+		DZA65_RS14200	0.12	-1.6
3,060,774	+		DZA65_RS14200	0.12	-0.2
3,060,774	+		DZA65_RS14200	0.12	-0.7
3,060,774	+		DZA65_RS14200	0.12	-2.2
3,060,774	+		DZA65_RS14200	0.12	-0.8
3,060,774	+		DZA65_RS14200	0.12	+0.4
3,060,775	-		DZA65_RS14200	0.12	-3.0
3,060,775	-		DZA65_RS14200	0.12	-0.3
3,060,775	-		DZA65_RS14200	0.12	+0.8
3,060,775	-		DZA65_RS14200	0.12	+0.2
3,060,775	-		DZA65_RS14200	0.12	-0.4
3,060,775	-		DZA65_RS14200	0.12	+0.6
3,060,791	+		DZA65_RS14200	0.12	-0.8
3,060,806	+		DZA65_RS14200	0.13	-1.3
3,060,806	+		DZA65_RS14200	0.13	+0.4
3,060,903	+		DZA65_RS14200	0.14	-1.2
3,060,903	+		DZA65_RS14200	0.14	-0.3
3,060,903	+		DZA65_RS14200	0.14	+0.4
3,060,965	+		DZA65_RS14200	0.15	-0.7
3,061,056	+		DZA65_RS14200	0.16	+0.4
3,061,057	-		DZA65_RS14200	0.16	+0.4
3,061,057	-		DZA65_RS14200	0.16	+1.6
3,061,085	+		DZA65_RS14200	0.16	+0.4
3,061,085	+		DZA65_RS14200	0.16	-0.0
3,061,085	+		DZA65_RS14200	0.16	+1.6
3,061,086	-		DZA65_RS14200	0.16	+1.2
3,061,092	+		DZA65_RS14200	0.17	+0.0
3,061,123	-		DZA65_RS14200	0.17	-1.0
3,061,123	-		DZA65_RS14200	0.17	+0.1
3,061,223	+		DZA65_RS14200	0.18	+0.8
3,061,321	+		DZA65_RS14200	0.20	+0.1
3,061,321	+		DZA65_RS14200	0.20	+1.3
3,061,322	-		DZA65_RS14200	0.20	-0.7
3,061,322	-		DZA65_RS14200	0.20	+0.9
3,061,510	+		DZA65_RS14200	0.22	-0.1
3,061,511	-		DZA65_RS14200	0.22	-0.3
3,061,511	-		DZA65_RS14200	0.22	-1.3
3,061,519	+		DZA65_RS14200	0.23	-0.2
3,061,519	+		DZA65_RS14200	0.23	-1.2
3,061,519	+		DZA65_RS14200	0.23	-1.2
3,061,519	+		DZA65_RS14200	0.23	-0.0
3,061,605	+		DZA65_RS14200	0.24	+0.8
3,061,605	+		DZA65_RS14200	0.24	+1.4
3,061,605	+		DZA65_RS14200	0.24	-0.3
3,061,606	-		DZA65_RS14200	0.24	-0.1
3,061,606	-		DZA65_RS14200	0.24	-0.6
3,061,715	-		DZA65_RS14200	0.25	+0.2
3,061,715	-		DZA65_RS14200	0.25	-0.3
3,061,715	-		DZA65_RS14200	0.25	-0.1
3,061,755	+		DZA65_RS14200	0.26	+1.0
3,061,755	+		DZA65_RS14200	0.26	+0.7
3,061,755	+		DZA65_RS14200	0.26	+1.4
3,061,755	+		DZA65_RS14200	0.26	+0.0
3,061,756	-		DZA65_RS14200	0.26	+0.7
3,061,756	-		DZA65_RS14200	0.26	+0.7
3,061,791	+		DZA65_RS14200	0.26	+0.1
3,061,791	+		DZA65_RS14200	0.26	+2.1
3,061,791	+		DZA65_RS14200	0.26	+0.9
3,061,792	-		DZA65_RS14200	0.26	-0.4
3,061,792	-		DZA65_RS14200	0.26	+0.6
3,061,792	-		DZA65_RS14200	0.26	+0.0
3,061,792	-		DZA65_RS14200	0.26	+1.2
3,061,810	+		DZA65_RS14200	0.27	-0.6
3,061,810	+		DZA65_RS14200	0.27	+0.6
3,061,810	+		DZA65_RS14200	0.27	+1.4
3,061,810	+		DZA65_RS14200	0.27	-1.3
3,061,811	-		DZA65_RS14200	0.27	+2.3
3,061,813	+		DZA65_RS14200	0.27	-0.4
3,061,814	+		DZA65_RS14200	0.27	+0.7
3,061,814	+		DZA65_RS14200	0.27	+0.4
3,061,814	+		DZA65_RS14200	0.27	-0.4
3,061,814	+		DZA65_RS14200	0.27	+0.2
3,061,814	+		DZA65_RS14200	0.27	+1.1
3,061,815	-		DZA65_RS14200	0.27	+1.4
3,061,815	-		DZA65_RS14200	0.27	+0.7
3,061,815	-		DZA65_RS14200	0.27	-1.9
3,061,886	+		DZA65_RS14200	0.28	-0.1
3,061,886	+		DZA65_RS14200	0.28	+0.7
3,061,985	+		DZA65_RS14200	0.29	-0.1
3,061,985	+		DZA65_RS14200	0.29	+0.5
3,061,985	+		DZA65_RS14200	0.29	+0.9
3,061,986	-		DZA65_RS14200	0.29	-0.1
3,061,986	-		DZA65_RS14200	0.29	+2.8
3,061,986	-		DZA65_RS14200	0.29	-0.6
3,061,986	-		DZA65_RS14200	0.29	+1.2
3,061,986	-		DZA65_RS14200	0.29	-1.3
3,062,026	-		DZA65_RS14200	0.30	+1.4
3,062,032	+		DZA65_RS14200	0.30	-0.0
3,062,032	+		DZA65_RS14200	0.30	-1.9
3,062,032	+		DZA65_RS14200	0.30	+1.0
3,062,033	-		DZA65_RS14200	0.30	+0.5
3,062,136	+		DZA65_RS14200	0.31	+0.3
3,062,136	+		DZA65_RS14200	0.31	-2.2
3,062,136	+		DZA65_RS14200	0.31	+0.7
3,062,136	+				+0.4
3,062,136	+		DZA65_RS14200	0.31	-1.9
3,062,137	-		DZA65_RS14200	0.31	+0.9
3,062,137	-		DZA65_RS14200	0.31	+0.1
3,062,137	-		DZA65_RS14200	0.31	+0.0
3,062,162	+		DZA65_RS14200	0.31	-1.2
3,062,163	-		DZA65_RS14200	0.31	+0.4
3,062,163	-		DZA65_RS14200	0.31	-1.2
3,062,203	+		DZA65_RS14200	0.32	+0.4
3,062,203	+		DZA65_RS14200	0.32	-0.2
3,062,203	+		DZA65_RS14200	0.32	-0.2
3,062,203	+		DZA65_RS14200	0.32	-0.8
3,062,203	+		DZA65_RS14200	0.32	-2.4
3,062,203	+		DZA65_RS14200	0.32	+0.2
3,062,204	-		DZA65_RS14200	0.32	-1.5
3,062,204	-		DZA65_RS14200	0.32	-0.4
3,062,204	-		DZA65_RS14200	0.32	+0.4
3,062,204	-		DZA65_RS14200	0.32	-0.1
3,062,204	-		DZA65_RS14200	0.32	-1.4
3,062,220	-		DZA65_RS14200	0.32	+0.4
3,062,329	+		DZA65_RS14200	0.34	-0.6
3,062,329	+		DZA65_RS14200	0.34	+2.7
3,062,330	-		DZA65_RS14200	0.34	+0.8
3,062,330	-		DZA65_RS14200	0.34	+0.1
3,062,354	+		DZA65_RS14200	0.34	-0.3
3,062,354	+		DZA65_RS14200	0.34	-1.6
3,062,354	+		DZA65_RS14200	0.34	-0.6
3,062,355	-		DZA65_RS14200	0.34	-1.2
3,062,355	-		DZA65_RS14200	0.34	-1.0
3,062,356	+		DZA65_RS14200	0.34	+0.3
3,062,356	+		DZA65_RS14200	0.34	+0.4
3,062,356	+		DZA65_RS14200	0.34	+0.1
3,062,356	+		DZA65_RS14200	0.34	-0.2
3,062,356	+		DZA65_RS14200	0.34	-0.8
3,062,357	-		DZA65_RS14200	0.34	+0.8
3,062,357	-		DZA65_RS14200	0.34	-0.6
3,062,363	+		DZA65_RS14200	0.34	+0.2
3,062,363	+		DZA65_RS14200	0.34	+0.2
3,062,364	-		DZA65_RS14200	0.34	+1.0
3,062,364	-		DZA65_RS14200	0.34	-0.6
3,062,364	-		DZA65_RS14200	0.34	-1.1
3,062,364	-		DZA65_RS14200	0.34	+0.4
3,062,399	+		DZA65_RS14200	0.35	-1.9
3,062,539	+		DZA65_RS14200	0.37	+0.1
3,062,539	+		DZA65_RS14200	0.37	-0.2
3,062,542	-		DZA65_RS14200	0.37	+0.0
3,062,620	+		DZA65_RS14200	0.38	-0.8
3,062,620	+		DZA65_RS14200	0.38	-1.2
3,062,620	+		DZA65_RS14200	0.38	-0.8
3,062,620	+		DZA65_RS14200	0.38	+1.8
3,062,620	+		DZA65_RS14200	0.38	+0.2
3,062,620	+		DZA65_RS14200	0.38	-1.6
3,062,620	+		DZA65_RS14200	0.38	-2.2
3,062,620	+		DZA65_RS14200	0.38	-0.6
3,062,621	-		DZA65_RS14200	0.38	+2.0
3,062,656	+				+0.0
3,062,656	+		DZA65_RS14200	0.38	-0.1
3,062,656	+		DZA65_RS14200	0.38	-0.3
3,062,656	+		DZA65_RS14200	0.38	-2.6
3,062,657	-		DZA65_RS14200	0.38	+0.7
3,062,657	-		DZA65_RS14200	0.38	+0.3
3,062,657	-		DZA65_RS14200	0.38	+0.4
3,062,755	+		DZA65_RS14200	0.40	-1.6
3,062,755	+				-1.2
3,062,755	+		DZA65_RS14200	0.40	+0.2
3,062,755	+		DZA65_RS14200	0.40	-2.5
3,062,755	+		DZA65_RS14200	0.40	+1.6
3,062,756	-		DZA65_RS14200	0.40	-1.5
3,062,756	-		DZA65_RS14200	0.40	-0.8
3,062,756	-		DZA65_RS14200	0.40	+0.1
3,062,756	-		DZA65_RS14200	0.40	-2.2
3,062,756	-		DZA65_RS14200	0.40	+0.1
3,062,756	-		DZA65_RS14200	0.40	-1.2
3,062,756	-		DZA65_RS14200	0.40	-0.1
3,062,756	-				-0.6
3,062,756	-		DZA65_RS14200	0.40	-0.2
3,062,759	+		DZA65_RS14200	0.40	-1.2
3,062,759	+		DZA65_RS14200	0.40	+0.9
3,062,759	+		DZA65_RS14200	0.40	+0.2
3,062,759	+		DZA65_RS14200	0.40	+0.9
3,062,759	+		DZA65_RS14200	0.40	+0.8
3,062,760	-		DZA65_RS14200	0.40	-1.3
3,062,760	-		DZA65_RS14200	0.40	-0.6
3,062,760	-		DZA65_RS14200	0.40	-0.9
3,062,760	-		DZA65_RS14200	0.40	-2.4
3,062,760	-		DZA65_RS14200	0.40	+1.4
3,062,760	-		DZA65_RS14200	0.40	+0.4
3,062,807	+		DZA65_RS14200	0.40	-0.6
3,062,807	+		DZA65_RS14200	0.40	+1.4
3,062,830	+		DZA65_RS14200	0.41	-0.2
3,062,830	+		DZA65_RS14200	0.41	+0.6
3,062,830	+		DZA65_RS14200	0.41	-0.8
3,062,831	-		DZA65_RS14200	0.41	-0.8
3,062,831	-		DZA65_RS14200	0.41	+0.2
3,062,831	-		DZA65_RS14200	0.41	+0.4
3,062,831	-		DZA65_RS14200	0.41	+0.1
3,062,904	-		DZA65_RS14200	0.42	-1.0
3,062,905	+		DZA65_RS14200	0.42	+0.6
3,062,905	+		DZA65_RS14200	0.42	+1.6
3,062,905	+		DZA65_RS14200	0.42	-0.6
3,062,905	+		DZA65_RS14200	0.42	+0.7
3,062,905	+		DZA65_RS14200	0.42	-1.2
3,062,906	-		DZA65_RS14200	0.42	-0.2
3,062,906	-		DZA65_RS14200	0.42	+0.1
3,062,906	-		DZA65_RS14200	0.42	+0.4
3,062,906	-		DZA65_RS14200	0.42	+0.1
3,063,106	+		DZA65_RS14200	0.45	-0.6
3,063,106	+		DZA65_RS14200	0.45	+0.2
3,063,107	-		DZA65_RS14200	0.45	-0.1
3,063,107	-		DZA65_RS14200	0.45	-0.4
3,063,138	-		DZA65_RS14200	0.45	+2.3
3,063,148	+		DZA65_RS14200	0.45	-0.8
3,063,237	+		DZA65_RS14200	0.46	-1.2
3,063,237	+		DZA65_RS14200	0.46	+0.8
3,063,237	+		DZA65_RS14200	0.46	-1.9
3,063,237	+		DZA65_RS14200	0.46	-1.2
3,063,237	+		DZA65_RS14200	0.46	-2.6
3,063,237	+		DZA65_RS14200	0.46	+0.1
3,063,237	+		DZA65_RS14200	0.46	+0.4
3,063,237	+		DZA65_RS14200	0.46	+1.0
3,063,237	+		DZA65_RS14200	0.46	+1.1
3,063,238	-		DZA65_RS14200	0.46	-0.3
3,063,238	-		DZA65_RS14200	0.46	+0.7
3,063,238	-		DZA65_RS14200	0.46	+0.1
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