Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13570

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,914,101	+		DZA65_RS13565	0.22	-0.0
2,914,102	-		DZA65_RS13565	0.22	-0.2
2,914,102	-		DZA65_RS13565	0.22	-0.3
2,914,102	-		DZA65_RS13565	0.22	-0.9
2,914,106	+		DZA65_RS13565	0.22	+0.1
2,914,106	+		DZA65_RS13565	0.22	+0.1
2,914,106	+		DZA65_RS13565	0.22	+0.7
2,914,106	+		DZA65_RS13565	0.22	-1.5
2,914,106	+		DZA65_RS13565	0.22	+1.0
2,914,106	+		DZA65_RS13565	0.22	+0.0
2,914,106	+		DZA65_RS13565	0.22	+1.5
2,914,106	+		DZA65_RS13565	0.22	-0.6
2,914,106	+		DZA65_RS13565	0.22	-0.5
2,914,107	-		DZA65_RS13565	0.22	+0.2
2,914,107	-		DZA65_RS13565	0.22	+1.1
2,914,107	-		DZA65_RS13565	0.22	-1.2
2,914,112	-		DZA65_RS13565	0.23	-1.2
2,914,112	-		DZA65_RS13565	0.23	-1.2
2,914,112	-		DZA65_RS13565	0.23	+2.0
2,914,112	-		DZA65_RS13565	0.23	+1.0
2,914,112	-		DZA65_RS13565	0.23	+0.1
2,914,112	-		DZA65_RS13565	0.23	+1.0
2,914,121	+		DZA65_RS13565	0.24	+0.5
2,914,121	+		DZA65_RS13565	0.24	+1.4
2,914,122	-		DZA65_RS13565	0.24	+0.5
2,914,122	-		DZA65_RS13565	0.24	+1.4
2,914,162	-		DZA65_RS13565	0.27	-1.9
2,914,263	+		DZA65_RS13565	0.37	-0.4
2,914,263	+		DZA65_RS13565	0.37	+0.5
2,914,263	+		DZA65_RS13565	0.37	+0.2
2,914,263	+		DZA65_RS13565	0.37	+0.5
2,914,263	+		DZA65_RS13565	0.37	-1.0
2,914,263	+		DZA65_RS13565	0.37	-0.9
2,914,263	+		DZA65_RS13565	0.37	+1.5
2,914,263	+		DZA65_RS13565	0.37	-0.1
2,914,263	+		DZA65_RS13565	0.37	-1.9
2,914,263	+		DZA65_RS13565	0.37	-1.9
2,914,263	+		DZA65_RS13565	0.37	-0.1
2,914,263	+		DZA65_RS13565	0.37	-1.2
2,914,263	+		DZA65_RS13565	0.37	+1.1
2,914,263	+		DZA65_RS13565	0.37	+0.4
2,914,263	+		DZA65_RS13565	0.37	-1.4
2,914,263	+		DZA65_RS13565	0.37	-0.0
2,914,263	+		DZA65_RS13565	0.37	-0.4
2,914,263	+		DZA65_RS13565	0.37	-1.0
2,914,264	-		DZA65_RS13565	0.37	+0.4
2,914,264	-		DZA65_RS13565	0.37	+0.4
2,914,264	-		DZA65_RS13565	0.37	+0.8
2,914,264	-		DZA65_RS13565	0.37	-0.4
2,914,265	+		DZA65_RS13565	0.37	+1.0
2,914,265	+		DZA65_RS13565	0.37	-0.9
2,914,265	+		DZA65_RS13565	0.37	+0.2
2,914,265	+		DZA65_RS13565	0.37	-0.3
2,914,266	-		DZA65_RS13565	0.37	+0.9
2,914,266	-		DZA65_RS13565	0.37	-0.6
2,914,266	-		DZA65_RS13565	0.37	+1.1
2,914,266	-		DZA65_RS13565	0.37	+0.8
2,914,266	-		DZA65_RS13565	0.37	+1.3
2,914,266	-		DZA65_RS13565	0.37	-1.2
2,914,266	-		DZA65_RS13565	0.37	+1.4
2,914,386	+		DZA65_RS13565	0.48	+0.5
2,914,386	+		DZA65_RS13565	0.48	-2.2
2,914,387	-		DZA65_RS13565	0.48	-0.1
2,914,387	-		DZA65_RS13565	0.48	-0.5
2,914,387	-		DZA65_RS13565	0.48	-2.6
2,914,387	-		DZA65_RS13565	0.48	-0.6
2,914,387	-		DZA65_RS13565	0.48	-0.0
2,914,387	-		DZA65_RS13565	0.48	+0.0
2,914,479	+		DZA65_RS13565	0.57	+0.3
2,914,480	-		DZA65_RS13565	0.57	+0.5
2,914,480	-		DZA65_RS13565	0.57	+0.6
2,914,503	-		DZA65_RS13565	0.59	+0.8
2,914,520	-		DZA65_RS13565	0.61	-0.6
2,914,520	-		DZA65_RS13565	0.61	+0.8
2,914,520	-		DZA65_RS13565	0.61	+0.4
2,914,690	+		DZA65_RS13565	0.77	+0.4
2,914,690	+		DZA65_RS13565	0.77	-0.8
2,914,690	+		DZA65_RS13565	0.77	-0.4
2,914,690	+		DZA65_RS13565	0.77	-0.2
2,914,691	-		DZA65_RS13565	0.77	+1.2
2,914,691	-		DZA65_RS13565	0.77	+0.1
2,914,691	-		DZA65_RS13565	0.77	-2.2
2,914,691	-		DZA65_RS13565	0.77	-0.4
2,914,691	-		DZA65_RS13565	0.77	-0.1
2,914,691	-		DZA65_RS13565	0.77	+0.3
2,914,691	-		DZA65_RS13565	0.77	-0.7
2,914,691	-		DZA65_RS13565	0.77	+0.3
2,914,691	-		DZA65_RS13565	0.77	+0.3
2,914,691	-		DZA65_RS13565	0.77	-1.1
2,914,691	-		DZA65_RS13565	0.77	+1.4
2,914,691	-		DZA65_RS13565	0.77	+1.4
2,914,691	-		DZA65_RS13565	0.77	+0.4
2,914,691	-		DZA65_RS13565	0.77	+0.4
2,914,691	-		DZA65_RS13565	0.77	-0.6
2,914,737	-		DZA65_RS13565	0.81	+2.4
2,914,737	-		DZA65_RS13565	0.81	-0.2
2,914,737	-		DZA65_RS13565	0.81	+0.4
2,914,838	+				+0.8
2,914,839	-				-0.4
2,914,839	-				-0.8
2,914,892	+				-1.4
2,914,927	+				+1.7
2,914,928	-				-0.1
2,914,928	-				-1.2
2,914,929	+				-0.8
2,914,930	-				-0.4
2,914,930	-				-0.2
2,914,956	+				-0.4
2,914,957	-				-0.3
2,914,962	+				+0.6
2,914,962	+				+1.0
2,914,962	+				-1.6
2,914,962	+				-1.0
2,914,962	+				-2.4
2,914,963	-				+0.5
2,915,159	+		DZA65_RS13570	0.19	-0.6
2,915,159	+		DZA65_RS13570	0.19	-1.6
2,915,160	-		DZA65_RS13570	0.19	+0.2
2,915,161	+		DZA65_RS13570	0.19	-2.9
2,915,162	-		DZA65_RS13570	0.19	-1.6
2,915,201	-		DZA65_RS13570	0.26	-0.7
2,915,278	+		DZA65_RS13570	0.41	-0.5
2,915,310	+		DZA65_RS13570	0.47	-1.2
2,915,311	-		DZA65_RS13570	0.47	-1.2
2,915,311	-		DZA65_RS13570	0.47	-0.2
2,915,311	-		DZA65_RS13570	0.47	-1.8
2,915,472	-		DZA65_RS13570	0.77	-2.9
2,915,562	-				-0.5
2,915,613	+				-1.2
2,915,614	-				-0.4
2,915,614	-				-0.1
2,915,617	+				-1.1
2,915,618	-				-1.3
2,915,647	+				-1.6
2,915,647	+				-0.8
2,915,648	-				-0.8
2,915,648	-				+0.8
2,915,648	-				-0.1
2,915,650	+				-1.3
2,915,650	+				-0.4
2,915,651	-				-3.2
2,915,667	+				-0.8
2,915,668	-				-0.6
2,915,668	-				+0.9
2,915,668	-				-2.8
2,915,668	-				-0.2
2,915,686	-				-1.2
2,915,731	-				-2.8
2,915,771	-				+0.0
2,915,786	-				-0.7
2,915,786	-				+0.1
2,915,810	+				+0.4
2,915,847	-				+0.7
2,915,859	+				-0.4
2,915,859	+				-0.1
2,915,860	-				-2.6
2,915,864	+				+0.3
2,915,864	+				+0.3
2,915,890	+				+1.4
2,916,056	+				+2.0
2,916,056	+				+0.1
2,916,056	+				+0.0
2,916,056	+				-0.1
2,916,057	-				+1.4
2,916,057	-				-1.0
2,916,074	-				-1.9
2,916,187	+		DZA65_RS13575	0.18	-0.4
2,916,187	+		DZA65_RS13575	0.18	+0.1
2,916,193	+		DZA65_RS13575	0.18	+0.4
2,916,193	+		DZA65_RS13575	0.18	-0.5
2,916,194	-		DZA65_RS13575	0.18	+0.4
2,916,213	-		DZA65_RS13575	0.19	-3.2
2,916,230	+		DZA65_RS13575	0.21	+1.0
2,916,231	-		DZA65_RS13575	0.21	-3.3
2,916,231	-		DZA65_RS13575	0.21	-1.9
2,916,231	-				-0.0
2,916,239	-		DZA65_RS13575	0.21	+0.7
2,916,411	-		DZA65_RS13575	0.35	+2.0
2,916,489	-		DZA65_RS13575	0.41	-1.6
2,916,552	-		DZA65_RS13575	0.45	-2.6