Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13330

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,853,410	+		DZA65_RS13325	0.79	-0.2
2,853,411	-		DZA65_RS13325	0.79	+0.4
2,853,411	-		DZA65_RS13325	0.79	-0.1
2,853,411	-		DZA65_RS13325	0.79	-0.9
2,853,411	-		DZA65_RS13325	0.79	+0.5
2,853,520	+		DZA65_RS13325	0.83	+0.9
2,853,520	+		DZA65_RS13325	0.83	+0.2
2,853,520	+		DZA65_RS13325	0.83	+1.2
2,853,520	+		DZA65_RS13325	0.83	+0.2
2,853,520	+		DZA65_RS13325	0.83	-0.1
2,853,520	+		DZA65_RS13325	0.83	-1.4
2,853,521	-		DZA65_RS13325	0.83	-0.5
2,853,521	-				-0.2
2,853,521	-		DZA65_RS13325	0.83	+0.4
2,853,521	-		DZA65_RS13325	0.83	+0.4
2,853,645	+		DZA65_RS13325	0.87	+0.0
2,853,645	+		DZA65_RS13325	0.87	+0.4
2,853,645	+		DZA65_RS13325	0.87	+0.7
2,853,646	-		DZA65_RS13325	0.87	-0.4
2,853,646	-		DZA65_RS13325	0.87	+1.4
2,853,646	-		DZA65_RS13325	0.87	-1.5
2,853,650	+		DZA65_RS13325	0.87	-2.5
2,853,651	-		DZA65_RS13325	0.87	+0.7
2,853,724	-		DZA65_RS13325	0.89	+0.1
2,853,735	-		DZA65_RS13325	0.90	+0.4
2,853,735	-		DZA65_RS13325	0.90	-1.6
2,853,744	+		DZA65_RS13325	0.90	+0.0
2,853,744	+		DZA65_RS13325	0.90	-0.6
2,853,744	+		DZA65_RS13325	0.90	+1.2
2,853,744	+		DZA65_RS13325	0.90	+0.4
2,853,745	-				+0.8
2,853,745	-				+0.4
2,853,745	-				+1.4
2,853,745	-				+0.4
2,853,745	-				+0.4
2,853,908	+				+0.7
2,853,908	+				-0.3
2,853,908	+				+0.9
2,853,909	-				+1.4
2,853,909	-				+0.1
2,853,909	-				-0.9
2,853,909	-				-0.9
2,853,909	-				+0.0
2,853,909	-				-0.0
2,853,909	-				+1.6
2,853,912	+				-0.3
2,853,912	+				-0.2
2,853,912	+				-2.0
2,853,912	+				+0.0
2,853,912	+				-0.2
2,853,912	+				-0.0
2,853,912	+				-2.5
2,853,912	+				-0.4
2,853,912	+				-1.0
2,853,913	-				+1.4
2,853,913	-				-0.1
2,853,913	-				-0.4
2,853,913	-				+1.4
2,853,913	-				-0.2
2,853,913	-				-1.6
2,853,913	-				-1.8
2,853,913	-				-0.9
2,853,913	-				-0.9
2,853,913	-				+2.1
2,853,913	-				-1.1
2,853,913	-				-0.1
2,853,918	+				-2.5
2,853,995	-				+0.2
2,854,002	+				+1.5
2,854,002	+				-1.2
2,854,003	-				-0.6
2,854,003	-				+1.4
2,854,003	-				-0.6
2,854,003	-				-0.0
2,854,051	+				-1.8
2,854,051	+				+0.4
2,854,051	+				+0.5
2,854,051	+				+0.2
2,854,051	+				-0.5
2,854,051	+				-1.2
2,854,051	+				-0.3
2,854,051	+				-0.1
2,854,052	-				-0.2
2,854,052	-				-1.6
2,854,052	-				-0.2
2,854,052	-				-0.2
2,854,052	-				-2.8
2,854,052	-				-0.6
2,854,052	-				+0.4
2,854,052	-				-3.2
2,854,052	-				+1.9
2,854,052	-				+1.6
2,854,052	-				-1.6
2,854,052	-				-2.2
2,854,052	-				+0.5
2,854,090	-				+0.1
2,854,090	-				-0.6
2,854,090	-				-2.8
2,854,094	+				-0.3
2,854,094	+				+0.1
2,854,094	+				+0.5
2,854,094	+				-0.6
2,854,094	+				+0.4
2,854,094	+				+1.0
2,854,094	+				+0.5
2,854,095	-				+0.7
2,854,095	-				-0.2
2,854,095	-				+1.9
2,854,109	+				-0.5
2,854,109	+				+0.5
2,854,109	+				-1.1
2,854,110	-				-1.6
2,854,110	-				+0.8
2,854,296	+				+0.1
2,854,308	+				+1.6
2,854,322	+				-0.6
2,854,370	+				+0.0
2,854,388	+				-2.0
2,854,389	-				+0.6
2,854,389	-				+1.2
2,854,396	+				+1.4
2,854,396	+				+0.8
2,854,397	-				-3.5
2,854,467	+				-2.8
2,854,468	-				-1.8
2,854,468	-				-2.5
2,854,468	-				-1.6
2,854,473	+				-0.9
2,854,512	+				-2.8
2,854,536	+		DZA65_RS13330	0.12	-3.1
2,854,537	-		DZA65_RS13330	0.12	-1.8
2,854,566	-		DZA65_RS13330	0.15	-1.1
2,854,574	+		DZA65_RS13330	0.15	-2.0
2,854,575	-				-1.2
2,854,671	+		DZA65_RS13330	0.24	-0.7
2,854,671	+		DZA65_RS13330	0.24	-1.3
2,854,671	+		DZA65_RS13330	0.24	+0.6
2,854,672	-		DZA65_RS13330	0.24	-0.2
2,854,728	+		DZA65_RS13330	0.29	-3.6
2,854,728	+		DZA65_RS13330	0.29	-0.5
2,854,728	+		DZA65_RS13330	0.29	-3.0
2,854,846	+		DZA65_RS13330	0.40	-1.2
2,854,846	+		DZA65_RS13330	0.40	+0.4
2,854,846	+		DZA65_RS13330	0.40	-2.8
2,854,846	+		DZA65_RS13330	0.40	-1.6
2,854,847	-		DZA65_RS13330	0.40	-0.9
2,854,847	-		DZA65_RS13330	0.40	-2.6
2,854,847	-		DZA65_RS13330	0.40	-2.5
2,854,847	-		DZA65_RS13330	0.40	-2.0
2,854,847	-		DZA65_RS13330	0.40	-1.8
2,854,847	-		DZA65_RS13330	0.40	-2.6
2,854,872	-		DZA65_RS13330	0.42	+0.1
2,854,872	-		DZA65_RS13330	0.42	-2.3
2,854,945	+		DZA65_RS13330	0.49	-2.6
2,854,946	-		DZA65_RS13330	0.49	-0.6
2,855,131	+		DZA65_RS13330	0.66	-1.3
2,855,131	+		DZA65_RS13330	0.66	-2.2
2,855,132	-		DZA65_RS13330	0.66	-0.9
2,855,132	-		DZA65_RS13330	0.66	-2.5
2,855,425	+				-3.2
2,855,425	+				-1.4
2,855,425	+				-0.1
2,855,425	+				-1.5
2,855,426	-				-3.1
2,855,426	-				-2.6
2,855,426	-				+0.4
2,855,426	-				-0.6
2,855,557	-				+1.1
2,855,560	-				+0.2
2,855,565	+				-0.9
2,855,619	-				-0.3
2,855,619	-				+0.0
2,855,669	-				+0.9
2,855,729	+				-1.1
2,855,732	+				+0.4
2,855,732	+				-0.3
2,855,732	+				+2.0
2,855,733	-				-0.2
2,855,733	-				-0.9
2,855,733	-				-2.0
2,855,733	-				+0.0
2,855,733	-				+0.6
2,855,748	+				+0.2
2,855,748	+				-0.6
2,855,749	-				+1.5
2,855,749	-				+0.0
2,855,749	-				+0.5
2,855,760	-				+1.7
2,855,794	+				-0.1
2,855,794	+				+0.4
2,855,795	-				+0.2
2,855,795	-				-0.4
2,855,795	-				-1.2
2,855,795	-				+0.5
2,855,814	+				+0.6
2,855,814	+				+0.9
2,855,814	+				-1.5
2,855,814	+				-1.2
2,855,815	-				-0.1
2,855,815	-				+0.5
2,855,921	+				-2.6
2,855,921	+				-1.0
2,855,921	+				-0.1
2,855,922	-				+0.8
2,855,922	-				-0.2
2,855,966	+				+0.4
2,855,969	+				-0.1
2,855,969	+				+0.1
2,855,969	+				+0.9
2,855,969	+				-1.6
2,855,970	-				-0.1
2,855,970	-				+0.5
2,856,013	+				+2.7
2,856,034	-				-0.3
2,856,034	-				+0.0
2,856,148	+				-0.3
2,856,148	+				+0.7
2,856,152	+				+0.4
2,856,153	-				+0.4
2,856,153	-				-0.1
2,856,153	-				+0.6
2,856,153	-				-0.4
2,856,444	+		DZA65_RS13340	0.18	+0.2
2,856,444	+		DZA65_RS13340	0.18	+1.2
2,856,444	+		DZA65_RS13340	0.18	-0.1
2,856,444	+		DZA65_RS13340	0.18	+0.4
2,856,445	-		DZA65_RS13340	0.18	+0.7
2,856,445	-		DZA65_RS13340	0.18	+0.4
2,856,445	-		DZA65_RS13340	0.18	-1.0
2,856,445	-		DZA65_RS13340	0.18	+1.4
2,856,445	-		DZA65_RS13340	0.18	+0.4
2,856,445	-		DZA65_RS13340	0.18	-0.1
2,856,445	-		DZA65_RS13340	0.18	+0.1
2,856,445	-		DZA65_RS13340	0.18	+2.8
2,856,445	-		DZA65_RS13340	0.18	+1.2
2,856,459	+		DZA65_RS13340	0.19	-0.3
2,856,459	+		DZA65_RS13340	0.19	-0.2
2,856,459	+		DZA65_RS13340	0.19	-0.7
2,856,459	+		DZA65_RS13340	0.19	-0.1
2,856,460	-		DZA65_RS13340	0.19	-0.6
2,856,460	-		DZA65_RS13340	0.19	-0.6
2,856,460	-		DZA65_RS13340	0.19	-1.8
2,856,460	-		DZA65_RS13340	0.19	-0.1
2,856,460	-		DZA65_RS13340	0.19	+1.0
2,856,460	-		DZA65_RS13340	0.19	-1.2
2,856,460	-		DZA65_RS13340	0.19	+0.9