Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10980

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,322,033	+				+0.2
2,322,034	-				-0.4
2,322,114	+				+0.4
2,322,115	-				-0.8
2,322,115	-				+0.2
2,322,115	-				-1.0
2,322,118	+				+0.9
2,322,118	+				+0.5
2,322,118	+				+0.2
2,322,119	-				+0.7
2,322,119	-				+0.6
2,322,119	-				-0.6
2,322,119	-				+0.6
2,322,169	+				-0.4
2,322,169	+				-0.8
2,322,169	+				-0.8
2,322,169	+				+0.7
2,322,169	+				+2.0
2,322,170	-				-1.1
2,322,170	-				-0.4
2,322,170	-				-0.2
2,322,193	+				+0.2
2,322,193	+				+2.5
2,322,193	+				-0.0
2,322,193	+				-0.6
2,322,193	+				-0.9
2,322,194	-				-0.8
2,322,194	-				-0.5
2,322,194	-				+1.0
2,322,194	-				-1.4
2,322,194	-				-1.1
2,322,194	-				+0.0
2,322,194	-				-0.3
2,322,194	-				+1.1
2,322,212	+				-0.8
2,322,212	+				-0.4
2,322,212	+				+1.2
2,322,213	-				+0.5
2,322,213	-				+0.2
2,322,215	-				+0.1
2,322,215	-				+3.0
2,322,290	+		DZA65_RS10975	0.15	-1.8
2,322,334	+		DZA65_RS10975	0.22	+1.0
2,322,334	+		DZA65_RS10975	0.22	+0.6
2,322,335	-		DZA65_RS10975	0.22	+1.0
2,322,428	+		DZA65_RS10975	0.37	-1.1
2,322,428	+		DZA65_RS10975	0.37	-2.1
2,322,428	+		DZA65_RS10975	0.37	-0.4
2,322,428	+		DZA65_RS10975	0.37	+0.8
2,322,428	+		DZA65_RS10975	0.37	-2.4
2,322,428	+		DZA65_RS10975	0.37	-1.5
2,322,428	+		DZA65_RS10975	0.37	-0.3
2,322,428	+		DZA65_RS10975	0.37	-0.9
2,322,428	+		DZA65_RS10975	0.37	+1.7
2,322,429	-		DZA65_RS10975	0.37	-1.7
2,322,434	+		DZA65_RS10975	0.38	-0.4
2,322,434	+		DZA65_RS10975	0.38	-0.0
2,322,434	+		DZA65_RS10975	0.38	+0.8
2,322,434	+		DZA65_RS10975	0.38	+1.0
2,322,434	+		DZA65_RS10975	0.38	-0.9
2,322,434	+		DZA65_RS10975	0.38	+0.5
2,322,434	+		DZA65_RS10975	0.38	+0.3
2,322,434	+		DZA65_RS10975	0.38	+0.2
2,322,434	+		DZA65_RS10975	0.38	-0.3
2,322,434	+		DZA65_RS10975	0.38	-1.5
2,322,434	+		DZA65_RS10975	0.38	+0.6
2,322,434	+		DZA65_RS10975	0.38	+1.5
2,322,435	-		DZA65_RS10975	0.38	-0.1
2,322,435	-		DZA65_RS10975	0.38	+1.2
2,322,435	-		DZA65_RS10975	0.38	+1.1
2,322,435	-		DZA65_RS10975	0.38	+0.5
2,322,435	-		DZA65_RS10975	0.38	-1.4
2,322,435	-		DZA65_RS10975	0.38	-1.0
2,322,435	-		DZA65_RS10975	0.38	-0.5
2,322,435	-		DZA65_RS10975	0.38	+0.2
2,322,435	-				+0.2
2,322,435	-		DZA65_RS10975	0.38	+0.5
2,322,443	-		DZA65_RS10975	0.40	-0.0
2,322,469	+		DZA65_RS10975	0.44	-0.3
2,322,469	+		DZA65_RS10975	0.44	+1.8
2,322,469	+		DZA65_RS10975	0.44	-0.8
2,322,469	+		DZA65_RS10975	0.44	-0.3
2,322,470	-		DZA65_RS10975	0.44	-0.3
2,322,470	-		DZA65_RS10975	0.44	+0.2
2,322,470	-		DZA65_RS10975	0.44	-2.4
2,322,473	-		DZA65_RS10975	0.44	+0.5
2,322,473	-		DZA65_RS10975	0.44	+0.3
2,322,485	+		DZA65_RS10975	0.46	-0.8
2,322,485	+				+1.2
2,322,485	+		DZA65_RS10975	0.46	-0.0
2,322,486	-		DZA65_RS10975	0.47	+0.2
2,322,486	-		DZA65_RS10975	0.47	+0.9
2,322,493	+		DZA65_RS10975	0.48	+0.2
2,322,493	+		DZA65_RS10975	0.48	+0.2
2,322,494	-		DZA65_RS10975	0.48	+0.4
2,322,494	-		DZA65_RS10975	0.48	-0.4
2,322,499	+		DZA65_RS10975	0.49	-0.4
2,322,500	-		DZA65_RS10975	0.49	-0.1
2,322,615	+		DZA65_RS10975	0.67	-1.6
2,322,840	+				+0.4
2,322,877	+				-0.2
2,322,877	+				-0.4
2,322,878	-				+1.1
2,322,900	+				+0.2
2,322,901	-				+1.6
2,323,074	+				-0.2
2,323,074	+				-1.0
2,323,222	+		DZA65_RS10980	0.24	-2.4
2,323,222	+		DZA65_RS10980	0.24	-1.2
2,323,222	+		DZA65_RS10980	0.24	+0.4
2,323,281	-		DZA65_RS10980	0.31	-0.5
2,323,426	+		DZA65_RS10980	0.47	-0.1
2,323,724	-		DZA65_RS10980	0.80	-0.8
2,323,898	-				-0.0
2,323,900	+				+0.6
2,323,901	-				+1.4
2,323,901	-				+1.6
2,323,908	+				+0.9
2,323,908	+				+0.7
2,323,909	-				-0.5
2,323,909	-				+0.4
2,323,909	-				+0.1
2,323,909	-				+1.1
2,323,977	+				-0.0
2,324,147	+		DZA65_RS10985	0.31	-1.8
2,324,147	+		DZA65_RS10985	0.31	-1.4
2,324,148	-		DZA65_RS10985	0.31	-2.8
2,324,148	-		DZA65_RS10985	0.31	+0.4
2,324,148	-		DZA65_RS10985	0.31	+0.8
2,324,154	-		DZA65_RS10985	0.32	-0.6
2,324,154	-		DZA65_RS10985	0.32	+0.1
2,324,154	-		DZA65_RS10985	0.32	+0.6
2,324,154	-		DZA65_RS10985	0.32	+2.8
2,324,165	+		DZA65_RS10985	0.34	-0.9
2,324,165	+		DZA65_RS10985	0.34	+0.9
2,324,165	+		DZA65_RS10985	0.34	-0.1
2,324,165	+		DZA65_RS10985	0.34	-0.4
2,324,165	+		DZA65_RS10985	0.34	+0.1
2,324,165	+		DZA65_RS10985	0.34	-0.9
2,324,166	-		DZA65_RS10985	0.34	+0.7
2,324,166	-		DZA65_RS10985	0.34	+0.4
2,324,166	-		DZA65_RS10985	0.34	+0.1
2,324,166	-		DZA65_RS10985	0.34	+0.2
2,324,166	-		DZA65_RS10985	0.34	-0.1
2,324,166	-		DZA65_RS10985	0.34	+1.0
2,324,166	-		DZA65_RS10985	0.34	-0.5
2,324,166	-		DZA65_RS10985	0.34	+0.4
2,324,166	-		DZA65_RS10985	0.34	-0.7
2,324,461	+		DZA65_RS10985	0.84	-0.9
2,324,461	+		DZA65_RS10985	0.84	+0.1
2,324,462	-		DZA65_RS10985	0.84	+1.2
2,324,462	-		DZA65_RS10985	0.84	+0.5
2,324,657	-		DZA65_RS10990	0.10	+1.0
2,324,657	-		DZA65_RS10990	0.10	-0.0
2,324,661	-		DZA65_RS10990	0.11	-1.1
2,324,661	-		DZA65_RS10990	0.11	-0.7
2,324,666	+		DZA65_RS10990	0.11	-1.7
2,324,666	+		DZA65_RS10990	0.11	+0.1
2,324,666	+		DZA65_RS10990	0.11	+0.6
2,324,666	+		DZA65_RS10990	0.11	+0.0
2,324,770	-		DZA65_RS10990	0.25	+0.8
2,324,770	-		DZA65_RS10990	0.25	+0.2